RNA–Protein interactions for RNA: ENST00000334690.10

TRAPPC11-201, Transcript of trafficking protein particle complex 11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC11, Length 4,552 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-201ENST00000334690 NDST3O95803 873 aa17.13■□□□□ 0.33
TRAPPC11-201ENST00000334690 PKMP14618 531 aaKnown RBP17.13■□□□□ 0.33
TRAPPC11-201ENST00000334690 GRM3Q14832 879 aa17.13■□□□□ 0.33
TRAPPC11-201ENST00000334690 OTOP3Q7RTS5 596 aa17.13■□□□□ 0.33
TRAPPC11-201ENST00000334690 SNX27Q96L92 541 aa17.13■□□□□ 0.33
TRAPPC11-201ENST00000334690 SLC25A51Q9H1U9 297 aa17.13■□□□□ 0.33
TRAPPC11-201ENST00000334690 BCAS3Q9H6U6 928 aa17.13■□□□□ 0.33
TRAPPC11-201ENST00000334690 SLC12A4Q9UP95 1085 aa17.13■□□□□ 0.33
TRAPPC11-201ENST00000334690 CHKBQ9Y259 395 aa17.13■□□□□ 0.33
TRAPPC11-201ENST00000334690 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP17.13■□□□□ 0.33
TRAPPC11-201ENST00000334690 RPP40O75818 363 aaKnown RBP17.13■□□□□ 0.33
TRAPPC11-201ENST00000334690 LINC00032P0C843 101 aa17.13■□□□□ 0.33
TRAPPC11-201ENST00000334690 HPGDP15428 266 aa17.13■□□□□ 0.33
TRAPPC11-201ENST00000334690 CXCR2P25025 360 aa17.13■□□□□ 0.33
TRAPPC11-201ENST00000334690 PSMA3P25788 255 aa17.13■□□□□ 0.33
TRAPPC11-201ENST00000334690 MC4RP32245 332 aa17.13■□□□□ 0.33
TRAPPC11-201ENST00000334690 ZNF280AP59817 542 aaPredicted RBP17.13■□□□□ 0.33
TRAPPC11-201ENST00000334690 TRAF3Q13114 568 aa17.13■□□□□ 0.33
TRAPPC11-201ENST00000334690 PPM1JQ5JR12 505 aa17.13■□□□□ 0.33
TRAPPC11-201ENST00000334690 CCDC185Q8N715 623 aa17.13■□□□□ 0.33
TRAPPC11-201ENST00000334690 TDRKHQ9Y2W6 561 aaKnown RBP17.13■□□□□ 0.33
TRAPPC11-201ENST00000334690 AK5Q9Y6K8 562 aa17.13■□□□□ 0.33
TRAPPC11-201ENST00000334690 MYL12AP19105 171 aa17.13■□□□□ 0.33
TRAPPC11-201ENST00000334690 SLC18A1P54219 525 aa17.13■□□□□ 0.33
TRAPPC11-201ENST00000334690 ZNF438Q7Z4V0 828 aa17.13■□□□□ 0.33
TRAPPC11-201ENST00000334690 PGAM4Q8N0Y7 254 aa17.13■□□□□ 0.33
TRAPPC11-201ENST00000334690 ACBD6Q9BR61 282 aa17.13■□□□□ 0.33
TRAPPC11-201ENST00000334690 GATA5Q9BWX5 397 aaPredicted RBP17.13■□□□□ 0.33
TRAPPC11-201ENST00000334690 MAGEL2Q9UJ55 1249 aa17.13■□□□□ 0.33
TRAPPC11-201ENST00000334690 CDH22Q9UJ99 828 aa17.13■□□□□ 0.33
TRAPPC11-201ENST00000334690 PARP4Q9UKK3 1724 aaKnown RBP17.12■□□□□ 0.33
TRAPPC11-201ENST00000334690 A0A0J9YYE9 177 aa17.12■□□□□ 0.33
TRAPPC11-201ENST00000334690 MSI1O43347 362 aaKnown RBP17.12■□□□□ 0.33
TRAPPC11-201ENST00000334690 TMEM63AO94886 807 aa17.12■□□□□ 0.33
TRAPPC11-201ENST00000334690 FTH1P02794 183 aa17.12■□□□□ 0.33
TRAPPC11-201ENST00000334690 PRDX6P30041 224 aa17.12■□□□□ 0.33
TRAPPC11-201ENST00000334690 CAPZA2P47755 286 aa17.12■□□□□ 0.33
TRAPPC11-201ENST00000334690 IDH2P48735 452 aaKnown RBP17.12■□□□□ 0.33
TRAPPC11-201ENST00000334690 ZYG11AQ6WRX3 759 aa17.12■□□□□ 0.33
TRAPPC11-201ENST00000334690 HPS6Q86YV9 775 aa17.12■□□□□ 0.33
TRAPPC11-201ENST00000334690 ZNF516Q92618 1163 aa17.12■□□□□ 0.33
TRAPPC11-201ENST00000334690 NXNL1Q96CM4 212 aa17.12■□□□□ 0.33
TRAPPC11-201ENST00000334690 MTFMTQ96DP5 389 aaKnown RBP17.12■□□□□ 0.33
TRAPPC11-201ENST00000334690 RNFT2Q96EX2 444 aa17.12■□□□□ 0.33
TRAPPC11-201ENST00000334690 NPAS2Q99743 824 aa17.12■□□□□ 0.33
TRAPPC11-201ENST00000334690 C6orf62Q9GZU0 229 aaPredicted RBP17.12■□□□□ 0.33
TRAPPC11-201ENST00000334690 CLK4Q9HAZ1 481 aaKnown RBP17.12■□□□□ 0.33
TRAPPC11-201ENST00000334690 DTLQ9NZJ0 730 aa17.12■□□□□ 0.33
TRAPPC11-201ENST00000334690 TREHO43280 583 aa17.12■□□□□ 0.33
TRAPPC11-201ENST00000334690 SH3BGRLO75368 114 aa17.12■□□□□ 0.33
TRAPPC11-201ENST00000334690 ASPAP45381 313 aa17.12■□□□□ 0.33
TRAPPC11-201ENST00000334690 TAF10Q12962 218 aa17.12■□□□□ 0.33
TRAPPC11-201ENST00000334690 DPYSL2Q16555 572 aa17.12■□□□□ 0.33
TRAPPC11-201ENST00000334690 CPSF6Q16630 551 aaKnown RBP eCLIP17.12■□□□□ 0.33
TRAPPC11-201ENST00000334690 ARHGAP36Q6ZRI8 547 aa17.12■□□□□ 0.33
TRAPPC11-201ENST00000334690 SPATA19Q7Z5L4 167 aa17.12■□□□□ 0.33
TRAPPC11-201ENST00000334690 DSELQ8IZU8 1212 aa17.12■□□□□ 0.33
TRAPPC11-201ENST00000334690 DPP10Q8N608 796 aa17.12■□□□□ 0.33
TRAPPC11-201ENST00000334690 IGSF9Q9P2J2 1179 aa17.12■□□□□ 0.33
TRAPPC11-201ENST00000334690 RPS6KB2Q9UBS0 482 aa17.12■□□□□ 0.33
TRAPPC11-201ENST00000334690 CORO2BQ9UQ03 480 aa17.12■□□□□ 0.33
TRAPPC11-201ENST00000334690 GRIN2DO15399 1336 aa17.12■□□□□ 0.33
TRAPPC11-201ENST00000334690 PAICSP22234 425 aaKnown RBP17.12■□□□□ 0.33
TRAPPC11-201ENST00000334690 SEMA5AQ13591 1074 aa17.12■□□□□ 0.33
TRAPPC11-201ENST00000334690 ZIK1Q3SY52 487 aaPredicted RBP17.12■□□□□ 0.33
TRAPPC11-201ENST00000334690 DCAF12L1Q5VU92 463 aa17.12■□□□□ 0.33
TRAPPC11-201ENST00000334690 FSTL4Q6MZW2 842 aa17.12■□□□□ 0.33
TRAPPC11-201ENST00000334690 C19orf18Q8NEA5 215 aa17.12■□□□□ 0.33
TRAPPC11-201ENST00000334690 TCAF1Q9Y4C2 921 aa17.12■□□□□ 0.33
TRAPPC11-201ENST00000334690 KCNE2Q9Y6J6 123 aa17.12■□□□□ 0.33
TRAPPC11-201ENST00000334690 DUOX1Q9NRD9 1551 aa17.12■□□□□ 0.33
TRAPPC11-201ENST00000334690 A8MUI8 341 aa17.11■□□□□ 0.33
TRAPPC11-201ENST00000334690 GDF10P55107 478 aa17.11■□□□□ 0.33
TRAPPC11-201ENST00000334690 ITGA1P56199 1179 aa17.11■□□□□ 0.33
TRAPPC11-201ENST00000334690 WDR4P57081 412 aaKnown RBP17.11■□□□□ 0.33
TRAPPC11-201ENST00000334690 DAOAP59103 153 aa17.11■□□□□ 0.33
TRAPPC11-201ENST00000334690 DPYSQ14117 519 aa17.11■□□□□ 0.33
TRAPPC11-201ENST00000334690 CERS6Q6ZMG9 384 aa17.11■□□□□ 0.33
TRAPPC11-201ENST00000334690 ANKRD23Q86SG2 305 aa17.11■□□□□ 0.33
TRAPPC11-201ENST00000334690 PROSER1Q86XN7 944 aa17.11■□□□□ 0.33
TRAPPC11-201ENST00000334690 OR7A2PQ8NGA2 310 aa17.11■□□□□ 0.33
TRAPPC11-201ENST00000334690 CCDC3Q9BQI4 270 aa17.11■□□□□ 0.33
TRAPPC11-201ENST00000334690 RHOBTB2Q9BYZ6 727 aa17.11■□□□□ 0.33
TRAPPC11-201ENST00000334690 PSME2Q9UL46 239 aa17.11■□□□□ 0.33
TRAPPC11-201ENST00000334690 A0A1W2PQH9 124 aa17.11■□□□□ 0.33
TRAPPC11-201ENST00000334690 C2orf71A6NGG8 1288 aa17.11■□□□□ 0.33
TRAPPC11-201ENST00000334690 MATN3O15232 486 aa17.11■□□□□ 0.33
TRAPPC11-201ENST00000334690 SCNN1AP37088 669 aa17.11■□□□□ 0.33
TRAPPC11-201ENST00000334690 PFKPQ01813 784 aa17.11■□□□□ 0.33
TRAPPC11-201ENST00000334690 HNRNPDQ14103 355 aaKnown RBP17.11■□□□□ 0.33
TRAPPC11-201ENST00000334690 DGCR6Q14129 220 aa17.11■□□□□ 0.33
TRAPPC11-201ENST00000334690 SUSD6Q92537 303 aa17.11■□□□□ 0.33
TRAPPC11-201ENST00000334690 NDRG1Q92597 394 aaKnown RBP17.11■□□□□ 0.33
TRAPPC11-201ENST00000334690 PPP1R16AQ96I34 528 aa17.11■□□□□ 0.33
TRAPPC11-201ENST00000334690 EGFL7Q9UHF1 273 aa17.11■□□□□ 0.33
TRAPPC11-201ENST00000334690 MCM8Q9UJA3 840 aa17.11■□□□□ 0.33
TRAPPC11-201ENST00000334690 ARIH1Q9Y4X5 557 aaPredicted RBP17.11■□□□□ 0.33
TRAPPC11-201ENST00000334690 PCDHB1Q9Y5F3 818 aa17.11■□□□□ 0.33
TRAPPC11-201ENST00000334690 C22orf31O95567 290 aa17.11■□□□□ 0.33
TRAPPC11-201ENST00000334690 CREMQ03060 361 aa17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms