RNA–Protein interactions for RNA: ENST00000331920.10

PTCH1-201, Transcript of patched 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTCH1, Length 8,057 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-201ENST00000331920 PUS10Q3MIT2 529 aaKnown RBP16.43■□□□□ 0.22
PTCH1-201ENST00000331920 NAT16Q8N8M0 369 aa16.43■□□□□ 0.22
PTCH1-201ENST00000331920 FDXACB1Q9BRP7 624 aaPredicted RBP16.43■□□□□ 0.22
PTCH1-201ENST00000331920 GRHL1Q9NZI5 618 aa16.43■□□□□ 0.22
PTCH1-201ENST00000331920 TNPO3Q9Y5L0 923 aaKnown RBP16.43■□□□□ 0.22
PTCH1-201ENST00000331920 RPL6Q02878 288 aaKnown RBP16.43■□□□□ 0.22
PTCH1-201ENST00000331920 PRAMEF17Q5VTA0 474 aa16.43■□□□□ 0.22
PTCH1-201ENST00000331920 SERPINA13PQ6UXR4 307 aa16.43■□□□□ 0.22
PTCH1-201ENST00000331920 ASB2Q96Q27 587 aa16.43■□□□□ 0.22
PTCH1-201ENST00000331920 CORO1BQ9BR76 489 aa16.43■□□□□ 0.22
PTCH1-201ENST00000331920 MRTO4Q9UKD2 239 aaKnown RBP16.43■□□□□ 0.22
PTCH1-201ENST00000331920 RPA1P27694 616 aa16.43■□□□□ 0.22
PTCH1-201ENST00000331920 HTR1BP28222 390 aa16.43■□□□□ 0.22
PTCH1-201ENST00000331920 DRG2P55039 364 aaKnown RBP16.43■□□□□ 0.22
PTCH1-201ENST00000331920 ZNF627Q7L945 461 aa16.43■□□□□ 0.22
PTCH1-201ENST00000331920 SAMD7Q7Z3H4 446 aa16.43■□□□□ 0.22
PTCH1-201ENST00000331920 HDDC3Q8N4P3 179 aa16.43■□□□□ 0.22
PTCH1-201ENST00000331920 IMP3Q9NV31 184 aaKnown RBP16.43■□□□□ 0.22
PTCH1-201ENST00000331920 IFT52Q9Y366 437 aa16.43■□□□□ 0.22
PTCH1-201ENST00000331920 WDR62O43379 1518 aa16.43■□□□□ 0.22
PTCH1-201ENST00000331920 AMHP03971 560 aa16.43■□□□□ 0.22
PTCH1-201ENST00000331920 IL1R1P14778 569 aa16.43■□□□□ 0.22
PTCH1-201ENST00000331920 CAPZA1P52907 286 aa16.43■□□□□ 0.22
PTCH1-201ENST00000331920 LAMTOR4Q0VGL1 99 aa16.43■□□□□ 0.22
PTCH1-201ENST00000331920 TYSND1Q2T9J0 566 aa16.43■□□□□ 0.22
PTCH1-201ENST00000331920 CDC42EP5Q6NZY7 148 aa16.43■□□□□ 0.22
PTCH1-201ENST00000331920 AARSD1Q9BTE6 412 aaKnown RBP16.43■□□□□ 0.22
PTCH1-201ENST00000331920 SUV39H1O43463 412 aa16.43■□□□□ 0.22
PTCH1-201ENST00000331920 GAS2O43903 313 aaKnown RBP16.43■□□□□ 0.22
PTCH1-201ENST00000331920 TBL1XO60907 577 aa16.43■□□□□ 0.22
PTCH1-201ENST00000331920 NADKO95544 446 aaPredicted RBP16.43■□□□□ 0.22
PTCH1-201ENST00000331920 TNFAIP8L3Q5GJ75 292 aa16.43■□□□□ 0.22
PTCH1-201ENST00000331920 FAM84BQ96KN1 310 aaPredicted RBP16.43■□□□□ 0.22
PTCH1-201ENST00000331920 SLC27A6Q9Y2P4 619 aa16.43■□□□□ 0.22
PTCH1-201ENST00000331920 HBS1LQ9Y450 684 aaKnown RBP16.43■□□□□ 0.22
PTCH1-201ENST00000331920 FOSL1P15407 271 aa16.43■□□□□ 0.22
PTCH1-201ENST00000331920 GRIA4P48058 902 aa16.43■□□□□ 0.22
PTCH1-201ENST00000331920 RCAN1P53805 252 aa16.43■□□□□ 0.22
PTCH1-201ENST00000331920 MTX3Q5HYI7 312 aa16.43■□□□□ 0.22
PTCH1-201ENST00000331920 SP8Q8IXZ3 490 aa16.43■□□□□ 0.22
PTCH1-201ENST00000331920 LRRC20Q8TCA0 184 aa16.43■□□□□ 0.22
PTCH1-201ENST00000331920 UXTQ9UBK9 157 aaPredicted RBP16.43■□□□□ 0.22
PTCH1-201ENST00000331920 C15orf41Q9Y2V0 281 aa16.43■□□□□ 0.22
PTCH1-201ENST00000331920 MAPKBP1O60336 1514 aa16.42■□□□□ 0.22
PTCH1-201ENST00000331920 A0A0G2JPF8 293 aa16.42■□□□□ 0.22
PTCH1-201ENST00000331920 HNRNPCL3B7ZW38 293 aa16.42■□□□□ 0.22
PTCH1-201ENST00000331920 HNRNPCL4P0DMR1 293 aa16.42■□□□□ 0.22
PTCH1-201ENST00000331920 NT5EP21589 574 aa16.42■□□□□ 0.22
PTCH1-201ENST00000331920 MTHFRP42898 656 aa16.42■□□□□ 0.22
PTCH1-201ENST00000331920 GTF2A2P52657 109 aa16.42■□□□□ 0.22
PTCH1-201ENST00000331920 SNRPD1P62314 119 aaKnown RBP16.42■□□□□ 0.22
PTCH1-201ENST00000331920 C9orf64Q5T6V5 341 aa16.42■□□□□ 0.22
PTCH1-201ENST00000331920 ZCCHC12Q6PEW1 402 aa16.42■□□□□ 0.22
PTCH1-201ENST00000331920 MGME1Q9BQP7 344 aa16.42■□□□□ 0.22
PTCH1-201ENST00000331920 MMADHCQ9H3L0 296 aaPredicted RBP16.42■□□□□ 0.22
PTCH1-201ENST00000331920 SEMA3GQ9NS98 782 aa16.42■□□□□ 0.22
PTCH1-201ENST00000331920 SLC37A4O43826 429 aa16.42■□□□□ 0.22
PTCH1-201ENST00000331920 SNAP91O60641 907 aa16.42■□□□□ 0.22
PTCH1-201ENST00000331920 TULP3O75386 442 aa16.42■□□□□ 0.22
PTCH1-201ENST00000331920 HGFP14210 728 aa16.42■□□□□ 0.22
PTCH1-201ENST00000331920 PRKCHP24723 683 aa16.42■□□□□ 0.22
PTCH1-201ENST00000331920 CPSF6Q16630 551 aaKnown RBP eCLIP16.42■□□□□ 0.22
PTCH1-201ENST00000331920 LY6KQ17RY6 165 aa16.42■□□□□ 0.22
PTCH1-201ENST00000331920 SPDYCQ5MJ68 293 aa16.42■□□□□ 0.22
PTCH1-201ENST00000331920 QSOX2Q6ZRP7 698 aa16.42■□□□□ 0.22
PTCH1-201ENST00000331920 COMTD1Q86VU5 262 aa16.42■□□□□ 0.22
PTCH1-201ENST00000331920 WDR12Q9GZL7 423 aaKnown RBP16.42■□□□□ 0.22
PTCH1-201ENST00000331920 ADGBQ8N7X0 1667 aa16.42■□□□□ 0.22
PTCH1-201ENST00000331920 TRAV19A0A0A6YYK7 116 aa16.42■□□□□ 0.22
PTCH1-201ENST00000331920 PER1O15534 1290 aaPredicted RBP16.42■□□□□ 0.22
PTCH1-201ENST00000331920 AP5Z1O43299 807 aa16.42■□□□□ 0.22
PTCH1-201ENST00000331920 PSMB4P28070 264 aa16.42■□□□□ 0.22
PTCH1-201ENST00000331920 MSX1P28360 303 aa16.42■□□□□ 0.22
PTCH1-201ENST00000331920 MSX2P35548 267 aaPredicted RBP16.42■□□□□ 0.22
PTCH1-201ENST00000331920 PTPN11Q06124 597 aaPredicted RBP16.42■□□□□ 0.22
PTCH1-201ENST00000331920 SLC9A4Q6AI14 798 aa16.42■□□□□ 0.22
PTCH1-201ENST00000331920 SLC5A5Q92911 643 aa16.42■□□□□ 0.22
PTCH1-201ENST00000331920 RAPGEFL1Q9UHV5 662 aa16.42■□□□□ 0.22
PTCH1-201ENST00000331920 ZNF180Q9UJW8 692 aa16.42■□□□□ 0.22
PTCH1-201ENST00000331920 ATF6P18850 670 aa16.42■□□□□ 0.22
PTCH1-201ENST00000331920 ZNF155Q12901 538 aaPredicted RBP16.42■□□□□ 0.22
PTCH1-201ENST00000331920 STXBP5Q5T5C0 1151 aa16.42■□□□□ 0.22
PTCH1-201ENST00000331920 GALNT18Q6P9A2 607 aa16.42■□□□□ 0.22
PTCH1-201ENST00000331920 TMED8Q6PL24 325 aaPredicted RBP16.42■□□□□ 0.22
PTCH1-201ENST00000331920 SNTG1Q9NSN8 517 aa16.42■□□□□ 0.22
PTCH1-201ENST00000331920 MAU2Q9Y6X3 613 aa16.42■□□□□ 0.22
PTCH1-201ENST00000331920 POLR1AO95602 1720 aaPredicted RBP16.42■□□□□ 0.22
PTCH1-201ENST00000331920 GNB5O14775 395 aa16.42■□□□□ 0.22
PTCH1-201ENST00000331920 FUT4P22083 530 aa16.42■□□□□ 0.22
PTCH1-201ENST00000331920 ZNF484Q5JVG2 852 aa16.42■□□□□ 0.22
PTCH1-201ENST00000331920 RBM23Q86U06 439 aaKnown RBP16.42■□□□□ 0.22
PTCH1-201ENST00000331920 SYN2Q92777 582 aaPredicted RBP16.42■□□□□ 0.22
PTCH1-201ENST00000331920 TBC1D10AQ9BXI6 508 aa16.42■□□□□ 0.22
PTCH1-201ENST00000331920 AP3S2P59780 193 aa16.42■□□□□ 0.22
PTCH1-201ENST00000331920 CHST15Q7LFX5 561 aaPredicted RBP16.42■□□□□ 0.22
PTCH1-201ENST00000331920 GPALPP1Q8IXQ4 340 aa16.42■□□□□ 0.22
PTCH1-201ENST00000331920 MPP5Q8N3R9 675 aa16.42■□□□□ 0.22
PTCH1-201ENST00000331920 ZBTB8BQ8NAP8 495 aaPredicted RBP16.42■□□□□ 0.22
PTCH1-201ENST00000331920 STAG3L4Q8TBR4 150 aa16.42■□□□□ 0.22
PTCH1-201ENST00000331920 STK32AQ8WU08 396 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms