RNA–Protein interactions for RNA: ENST00000329231.8

ATPAF1-201, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2 BASIC

Gene ATPAF1, Length 1,241 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-201ENST00000329231 CCNI2Q6ZMN8 369 aaPredicted RBP27.69■■■□□ 2.02
ATPAF1-201ENST00000329231 BZW1Q7L1Q6 419 aaKnown RBP27.69■■■□□ 2.02
ATPAF1-201ENST00000329231 DAAM2Q86T65 1068 aa27.69■■■□□ 2.02
ATPAF1-201ENST00000329231 ARRDC2Q8TBH0 407 aa27.69■■■□□ 2.02
ATPAF1-201ENST00000329231 LMX1AQ8TE12 382 aa27.69■■■□□ 2.02
ATPAF1-201ENST00000329231 TBATAQ96M53 351 aa27.69■■■□□ 2.02
ATPAF1-201ENST00000329231 COQ10AQ96MF6 247 aa27.69■■■□□ 2.02
ATPAF1-201ENST00000329231 OLFM3Q96PB7 478 aa27.69■■■□□ 2.02
ATPAF1-201ENST00000329231 MCCC1Q96RQ3 725 aaPredicted RBP27.69■■■□□ 2.02
ATPAF1-201ENST00000329231 BAG1Q99933 345 aaPredicted RBP27.69■■■□□ 2.02
ATPAF1-201ENST00000329231 OR1A2Q9Y585 309 aa27.69■■■□□ 2.02
ATPAF1-201ENST00000329231 TDRD6O60522 2096 aaKnown RBP27.69■■■□□ 2.02
ATPAF1-201ENST00000329231 CEP295Q9C0D2 2601 aa27.68■■■□□ 2.02
ATPAF1-201ENST00000329231 GOLGA6L6A8MZA4 724 aa27.68■■■□□ 2.02
ATPAF1-201ENST00000329231 K7ESM1 405 aa27.68■■■□□ 2.02
ATPAF1-201ENST00000329231 FZD6O60353 706 aa27.68■■■□□ 2.02
ATPAF1-201ENST00000329231 PROS1P07225 676 aa27.68■■■□□ 2.02
ATPAF1-201ENST00000329231 PDHA1P08559 390 aa27.68■■■□□ 2.02
ATPAF1-201ENST00000329231 GM2AP17900 193 aa27.68■■■□□ 2.02
ATPAF1-201ENST00000329231 ACP1P24666 158 aa27.68■■■□□ 2.02
ATPAF1-201ENST00000329231 NR2C2P49116 596 aa27.68■■■□□ 2.02
ATPAF1-201ENST00000329231 DAB2P98082 770 aa27.68■■■□□ 2.02
ATPAF1-201ENST00000329231 ARHGEF7Q14155 803 aa27.68■■■□□ 2.02
ATPAF1-201ENST00000329231 SMAD1Q15797 465 aaKnown RBP27.68■■■□□ 2.02
ATPAF1-201ENST00000329231 TAZQ16635 292 aa27.68■■■□□ 2.02
ATPAF1-201ENST00000329231 NPNTQ6UXI9 565 aa27.68■■■□□ 2.02
ATPAF1-201ENST00000329231 RAD9BQ6WBX8 426 aa27.68■■■□□ 2.02
ATPAF1-201ENST00000329231 KATNAL2Q8IYT4 538 aa27.68■■■□□ 2.02
ATPAF1-201ENST00000329231 RCOR2Q8IZ40 523 aa27.68■■■□□ 2.02
ATPAF1-201ENST00000329231 IL12RB2Q99665 862 aa27.68■■■□□ 2.02
ATPAF1-201ENST00000329231 NPIPB15A6NHN6 443 aaPredicted RBP27.67■■■□□ 2.02
ATPAF1-201ENST00000329231 PSMD11O00231 422 aa27.67■■■□□ 2.02
ATPAF1-201ENST00000329231 ZRANB2O95218 330 aaKnown RBP eCLIP27.67■■■□□ 2.02
ATPAF1-201ENST00000329231 EPHB1P54762 984 aa27.67■■■□□ 2.02
ATPAF1-201ENST00000329231 NAP1L1P55209 391 aaKnown RBP27.67■■■□□ 2.02
ATPAF1-201ENST00000329231 NIPAL4Q0D2K0 466 aa27.67■■■□□ 2.02
ATPAF1-201ENST00000329231 PRRT3Q5FWE3 981 aa27.67■■■□□ 2.02
ATPAF1-201ENST00000329231 ENPP7Q6UWV6 458 aa27.67■■■□□ 2.02
ATPAF1-201ENST00000329231 SPOCD1Q6ZMY3 1216 aa27.67■■■□□ 2.02
ATPAF1-201ENST00000329231 RBFAQ8N0V3 343 aa27.67■■■□□ 2.02
ATPAF1-201ENST00000329231 FAM181AQ8N9Y4 354 aa27.67■■■□□ 2.02
ATPAF1-201ENST00000329231 PLA2G15Q8NCC3 412 aa27.67■■■□□ 2.02
ATPAF1-201ENST00000329231 NUS1Q96E22 293 aa27.67■■■□□ 2.02
ATPAF1-201ENST00000329231 TDRD1Q9BXT4 1180 aaKnown RBP27.67■■■□□ 2.02
ATPAF1-201ENST00000329231 EVA1BQ9NVM1 165 aa27.67■■■□□ 2.02
ATPAF1-201ENST00000329231 SALL4Q9UJQ4 1053 aa27.67■■■□□ 2.02
ATPAF1-201ENST00000329231 PNMA8BQ9ULN7 279 aaPredicted RBP27.67■■■□□ 2.02
ATPAF1-201ENST00000329231 TMEM8BA6NDV4 472 aa27.66■■■□□ 2.02
ATPAF1-201ENST00000329231 RCCD1A6NED2 376 aa27.66■■■□□ 2.02
ATPAF1-201ENST00000329231 BTNL10A8MVZ5 291 aa27.66■■■□□ 2.02
ATPAF1-201ENST00000329231 CACNB4O00305 520 aaPredicted RBP27.66■■■□□ 2.02
ATPAF1-201ENST00000329231 TPP1O14773 563 aa27.66■■■□□ 2.02
ATPAF1-201ENST00000329231 CTPS1P17812 591 aa27.66■■■□□ 2.02
ATPAF1-201ENST00000329231 RPL26P61254 145 aaKnown RBP27.66■■■□□ 2.02
ATPAF1-201ENST00000329231 TFDP3Q5H9I0 405 aa27.66■■■□□ 2.02
ATPAF1-201ENST00000329231 DENND2CQ68D51 928 aa27.66■■■□□ 2.02
ATPAF1-201ENST00000329231 ESRP1Q6NXG1 681 aaKnown RBP27.66■■■□□ 2.02
ATPAF1-201ENST00000329231 TMPRSS12Q86WS5 348 aa27.66■■■□□ 2.02
ATPAF1-201ENST00000329231 CBARPQ8N350 705 aaPredicted RBP27.66■■■□□ 2.02
ATPAF1-201ENST00000329231 RBM41Q96IZ5 413 aaKnown RBP27.66■■■□□ 2.02
ATPAF1-201ENST00000329231 APOLD1Q96LR9 279 aa27.66■■■□□ 2.02
ATPAF1-201ENST00000329231 WDR92Q96MX6 357 aa27.66■■■□□ 2.02
ATPAF1-201ENST00000329231 TCEAL2Q9H3H9 227 aaPredicted RBP27.66■■■□□ 2.02
ATPAF1-201ENST00000329231 USP29Q9HBJ7 922 aa27.66■■■□□ 2.02
ATPAF1-201ENST00000329231 RPL26L1Q9UNX3 145 aaKnown RBP27.66■■■□□ 2.02
ATPAF1-201ENST00000329231 CHKBQ9Y259 395 aa27.66■■■□□ 2.02
ATPAF1-201ENST00000329231 REXO2Q9Y3B8 237 aaKnown RBP27.66■■■□□ 2.02
ATPAF1-201ENST00000329231 CST8O60676 142 aa27.65■■■□□ 2.02
ATPAF1-201ENST00000329231 RASGRP1O95267 797 aa27.65■■■□□ 2.02
ATPAF1-201ENST00000329231 HOXC4P09017 264 aaPredicted RBP27.65■■■□□ 2.02
ATPAF1-201ENST00000329231 CKMT1AP12532 417 aa27.65■■■□□ 2.02
ATPAF1-201ENST00000329231 TGM2P21980 687 aa27.65■■■□□ 2.02
ATPAF1-201ENST00000329231 LHCGRP22888 699 aa27.65■■■□□ 2.02
ATPAF1-201ENST00000329231 HNF1BP35680 557 aa27.65■■■□□ 2.02
ATPAF1-201ENST00000329231 TRIM23P36406 574 aa27.65■■■□□ 2.02
ATPAF1-201ENST00000329231 HK3P52790 923 aa27.65■■■□□ 2.02
ATPAF1-201ENST00000329231 KIAA1024LP59773 190 aa27.65■■■□□ 2.02
ATPAF1-201ENST00000329231 ZBTB17Q13105 803 aa27.65■■■□□ 2.02
ATPAF1-201ENST00000329231 IHHQ14623 411 aa27.65■■■□□ 2.02
ATPAF1-201ENST00000329231 ST3GAL2Q16842 350 aa27.65■■■□□ 2.02
ATPAF1-201ENST00000329231 KAZNQ674X7 775 aa27.65■■■□□ 2.02
ATPAF1-201ENST00000329231 ZCCHC8Q6NZY4 707 aaKnown RBP27.65■■■□□ 2.02
ATPAF1-201ENST00000329231 PNCKQ6P2M8 343 aa27.65■■■□□ 2.02
ATPAF1-201ENST00000329231 HID1Q8IV36 788 aa27.65■■■□□ 2.02
ATPAF1-201ENST00000329231 CNTD1Q8N815 330 aa27.65■■■□□ 2.02
ATPAF1-201ENST00000329231 EXD1Q8NHP7 514 aa27.65■■■□□ 2.02
ATPAF1-201ENST00000329231 LRRC61Q9BV99 259 aa27.65■■■□□ 2.02
ATPAF1-201ENST00000329231 SEPT10Q9P0V9 454 aa27.65■■■□□ 2.02
ATPAF1-201ENST00000329231 KLQ9UEF7 1012 aa27.65■■■□□ 2.02
ATPAF1-201ENST00000329231 DNPEPQ9ULA0 475 aa27.65■■■□□ 2.02
ATPAF1-201ENST00000329231 A0A0J9YYE9 177 aa27.64■■■□□ 2.02
ATPAF1-201ENST00000329231 TRBC1P01850 177 aa27.64■■■□□ 2.02
ATPAF1-201ENST00000329231 ALPIP09923 528 aa27.64■■■□□ 2.02
ATPAF1-201ENST00000329231 KELP23276 732 aa27.64■■■□□ 2.02
ATPAF1-201ENST00000329231 DUSP3P51452 185 aaPredicted RBP27.64■■■□□ 2.02
ATPAF1-201ENST00000329231 VAV2P52735 878 aa27.64■■■□□ 2.02
ATPAF1-201ENST00000329231 SRP54P61011 504 aaKnown RBP27.64■■■□□ 2.02
ATPAF1-201ENST00000329231 ALG11Q2TAA5 492 aa27.64■■■□□ 2.02
ATPAF1-201ENST00000329231 HSD11B1LQ7Z5J1 315 aa27.64■■■□□ 2.02
ATPAF1-201ENST00000329231 TSPAN33Q86UF1 283 aa27.64■■■□□ 2.02
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms