RNA–Protein interactions for RNA: ENST00000224237.9

VIM-201, Transcript of vimentin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VIM, Length 1,868 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-201ENST00000224237 TAF1BQ53T94 588 aaPredicted RBP18.18■□□□□ 0.5
VIM-201ENST00000224237 N4BP2L1Q5TBK1 243 aaPredicted RBP18.18■□□□□ 0.5
VIM-201ENST00000224237 AFTPHQ6ULP2 937 aa18.18■□□□□ 0.5
VIM-201ENST00000224237 RAPH1Q70E73 1250 aa18.18■□□□□ 0.5
VIM-201ENST00000224237 ACVR1CQ8NER5 493 aa18.18■□□□□ 0.5
VIM-201ENST00000224237 OR4L1Q8NH43 312 aa18.18■□□□□ 0.5
VIM-201ENST00000224237 PIH1D2Q8WWB5 315 aa18.18■□□□□ 0.5
VIM-201ENST00000224237 ZFYVE19Q96K21 471 aa18.18■□□□□ 0.5
VIM-201ENST00000224237 ZNF576Q9H609 170 aa18.18■□□□□ 0.5
VIM-201ENST00000224237 SUDS3Q9H7L9 328 aaPredicted RBP18.18■□□□□ 0.5
VIM-201ENST00000224237 MANSC1Q9H8J5 431 aa18.18■□□□□ 0.5
VIM-201ENST00000224237 CATSPERZQ9NTU4 200 aa18.18■□□□□ 0.5
VIM-201ENST00000224237 ANKRD6Q9Y2G4 727 aa18.18■□□□□ 0.5
VIM-201ENST00000224237 OR51F1A6NGY5 319 aa18.18■□□□□ 0.5
VIM-201ENST00000224237 HEPACAM2A8MVW5 462 aa18.18■□□□□ 0.5
VIM-201ENST00000224237 CD3EAPO15446 510 aaKnown RBP18.18■□□□□ 0.5
VIM-201ENST00000224237 STMN1P16949 149 aa18.18■□□□□ 0.5
VIM-201ENST00000224237 HOXB8P17481 243 aaPredicted RBP18.18■□□□□ 0.5
VIM-201ENST00000224237 DGKGP49619 791 aa18.18■□□□□ 0.5
VIM-201ENST00000224237 DLX2Q07687 328 aaPredicted RBP18.18■□□□□ 0.5
VIM-201ENST00000224237 DLG2Q15700 870 aa18.18■□□□□ 0.5
VIM-201ENST00000224237 CNSTQ6PJW8 725 aa18.18■□□□□ 0.5
VIM-201ENST00000224237 PIGWQ7Z7B1 504 aa18.18■□□□□ 0.5
VIM-201ENST00000224237 LCA5Q86VQ0 697 aa18.18■□□□□ 0.5
VIM-201ENST00000224237 TRIM42Q8IWZ5 723 aa18.18■□□□□ 0.5
VIM-201ENST00000224237 PAF1Q8N7H5 531 aa18.18■□□□□ 0.5
VIM-201ENST00000224237 SCG3Q8WXD2 468 aaKnown RBP18.18■□□□□ 0.5
VIM-201ENST00000224237 MYLIPQ8WY64 445 aa18.18■□□□□ 0.5
VIM-201ENST00000224237 GRAMD1AQ96CP6 724 aa18.18■□□□□ 0.5
VIM-201ENST00000224237 PITPNM3Q9BZ71 974 aa18.18■□□□□ 0.5
VIM-201ENST00000224237 TLK1Q9UKI8 766 aa18.18■□□□□ 0.5
VIM-201ENST00000224237 BIRC5O15392 142 aa18.17■□□□□ 0.5
VIM-201ENST00000224237 SLC4A1P02730 911 aa18.17■□□□□ 0.5
VIM-201ENST00000224237 NEFHP12036 1026 aa18.17■□□□□ 0.5
VIM-201ENST00000224237 BMP1P13497 986 aa18.17■□□□□ 0.5
VIM-201ENST00000224237 GKP32189 559 aa18.17■□□□□ 0.5
VIM-201ENST00000224237 RAB10P61026 200 aa18.17■□□□□ 0.5
VIM-201ENST00000224237 POU4F1Q01851 419 aa18.17■□□□□ 0.5
VIM-201ENST00000224237 RAD51Q06609 339 aa18.17■□□□□ 0.5
VIM-201ENST00000224237 DBN1Q16643 649 aa18.17■□□□□ 0.5
VIM-201ENST00000224237 GEN1Q17RS7 908 aa18.17■□□□□ 0.5
VIM-201ENST00000224237 MYLK3Q32MK0 819 aa18.17■□□□□ 0.5
VIM-201ENST00000224237 CCDC153Q494R4 210 aa18.17■□□□□ 0.5
VIM-201ENST00000224237 CARD16Q5EG05 197 aa18.17■□□□□ 0.5
VIM-201ENST00000224237 TMEM215Q68D42 235 aa18.17■□□□□ 0.5
VIM-201ENST00000224237 CLEC14AQ86T13 490 aa18.17■□□□□ 0.5
VIM-201ENST00000224237 SPATS2Q86XZ4 545 aaKnown RBP18.17■□□□□ 0.5
VIM-201ENST00000224237 SLC41A1Q8IVJ1 513 aa18.17■□□□□ 0.5
VIM-201ENST00000224237 CACNA2D3Q8IZS8 1091 aa18.17■□□□□ 0.5
VIM-201ENST00000224237 TTC30BQ8N4P2 665 aa18.17■□□□□ 0.5
VIM-201ENST00000224237 GPATCH11Q8N954 259 aa18.17■□□□□ 0.5
VIM-201ENST00000224237 CCDC63Q8NA47 563 aa18.17■□□□□ 0.5
VIM-201ENST00000224237 WFIKKN2Q8TEU8 576 aa18.17■□□□□ 0.5
VIM-201ENST00000224237 SEC16BQ96JE7 1060 aa18.17■□□□□ 0.5
VIM-201ENST00000224237 ELMO2Q96JJ3 720 aa18.17■□□□□ 0.5
VIM-201ENST00000224237 SMIM14Q96QK8 99 aa18.17■□□□□ 0.5
VIM-201ENST00000224237 CPEB1Q9BZB8 566 aaKnown RBP18.17■□□□□ 0.5
VIM-201ENST00000224237 POLR3BQ9NW08 1133 aaPredicted RBP18.17■□□□□ 0.5
VIM-201ENST00000224237 THG1LQ9NWX6 298 aaKnown RBP18.17■□□□□ 0.5
VIM-201ENST00000224237 MARCH4Q9P2E8 410 aaPredicted RBP18.17■□□□□ 0.5
VIM-201ENST00000224237 SLCO3A1Q9UIG8 710 aa18.17■□□□□ 0.5
VIM-201ENST00000224237 CDH7Q9ULB5 785 aa18.17■□□□□ 0.5
VIM-201ENST00000224237 ERVW-1Q9UQF0 538 aa18.17■□□□□ 0.5
VIM-201ENST00000224237 ZNF711Q9Y462 761 aa18.17■□□□□ 0.5
VIM-201ENST00000224237 DOCK8Q8NF50 2099 aa18.16■□□□□ 0.5
VIM-201ENST00000224237 A0A0J9YYE9 177 aa18.16■□□□□ 0.5
VIM-201ENST00000224237 STX7O15400 261 aaKnown RBP18.16■□□□□ 0.5
VIM-201ENST00000224237 PLIN3O60664 434 aa18.16■□□□□ 0.5
VIM-201ENST00000224237 TRBC1P01850 177 aa18.16■□□□□ 0.5
VIM-201ENST00000224237 SAT1P21673 171 aa18.16■□□□□ 0.5
VIM-201ENST00000224237 CRABP2P29373 138 aa18.16■□□□□ 0.5
VIM-201ENST00000224237 NNMTP40261 264 aa18.16■□□□□ 0.5
VIM-201ENST00000224237 CCNHP51946 323 aaPredicted RBP18.16■□□□□ 0.5
VIM-201ENST00000224237 SLC12A2P55011 1212 aa18.16■□□□□ 0.5
VIM-201ENST00000224237 FAM47EQ6ZV65 393 aa18.16■□□□□ 0.5
VIM-201ENST00000224237 SDCCAG8Q86SQ7 713 aaPredicted RBP18.16■□□□□ 0.5
VIM-201ENST00000224237 PLPP6Q8IY26 295 aa18.16■□□□□ 0.5
VIM-201ENST00000224237 ELAC2Q9BQ52 826 aaKnown RBP18.16■□□□□ 0.5
VIM-201ENST00000224237 PRO3102Q9H379 93 aa18.16■□□□□ 0.5
VIM-201ENST00000224237 EBF3Q9H4W6 596 aa18.16■□□□□ 0.5
VIM-201ENST00000224237 CLEC1BQ9P126 229 aa18.16■□□□□ 0.5
VIM-201ENST00000224237 EMCNQ9ULC0 261 aa18.16■□□□□ 0.5
VIM-201ENST00000224237 CORO1CQ9ULV4 474 aaPredicted RBP18.16■□□□□ 0.5
VIM-201ENST00000224237 PHTF1Q9UMS5 762 aa18.16■□□□□ 0.5
VIM-201ENST00000224237 SLC27A6Q9Y2P4 619 aa18.16■□□□□ 0.5
VIM-201ENST00000224237 H7C0S8 307 aa18.16■□□□□ 0.5
VIM-201ENST00000224237 KLF11O14901 512 aa18.16■□□□□ 0.5
VIM-201ENST00000224237 BNIP3LO60238 219 aa18.16■□□□□ 0.5
VIM-201ENST00000224237 SNX3O60493 162 aa18.16■□□□□ 0.5
VIM-201ENST00000224237 TBX10O75333 385 aa18.16■□□□□ 0.5
VIM-201ENST00000224237 POP4O95707 220 aaKnown RBP18.16■□□□□ 0.5
VIM-201ENST00000224237 S1PR4O95977 384 aa18.16■□□□□ 0.5
VIM-201ENST00000224237 ASLP04424 464 aa18.16■□□□□ 0.5
VIM-201ENST00000224237 CISD3P0C7P0 127 aa18.16■□□□□ 0.5
VIM-201ENST00000224237 ARSAP15289 507 aa18.16■□□□□ 0.5
VIM-201ENST00000224237 FCARP24071 287 aa18.16■□□□□ 0.5
VIM-201ENST00000224237 HMGCLP35914 325 aa18.16■□□□□ 0.5
VIM-201ENST00000224237 VASPP50552 380 aaPredicted RBP18.16■□□□□ 0.5
VIM-201ENST00000224237 PDGFRLQ15198 375 aa18.16■□□□□ 0.5
VIM-201ENST00000224237 TYSND1Q2T9J0 566 aa18.16■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms