RNA–Protein interactions for RNA: ENST00000576713.6

NPLOC4-219, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 5

Gene NPLOC4, Length 571 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-219ENST00000576713 HEPHQ9BQS7 1158 aa9.58□□□□□ -0.88
NPLOC4-219ENST00000576713 CEP41Q9BYV8 373 aa9.58□□□□□ -0.88
NPLOC4-219ENST00000576713 ARRDC1-AS1Q9H2J1 176 aa9.58□□□□□ -0.88
NPLOC4-219ENST00000576713 C10orf88Q9H8K7 445 aa9.58□□□□□ -0.88
NPLOC4-219ENST00000576713 FBRSQ9HAH7 460 aa9.58□□□□□ -0.88
NPLOC4-219ENST00000576713 SP110Q9HB58 689 aa9.58□□□□□ -0.88
NPLOC4-219ENST00000576713 DDX56Q9NY93 547 aaKnown RBP9.58□□□□□ -0.88
NPLOC4-219ENST00000576713 PYCARDQ9ULZ3 195 aa9.58□□□□□ -0.88
NPLOC4-219ENST00000576713 HPCAL4Q9UM19 191 aa9.58□□□□□ -0.88
NPLOC4-219ENST00000576713 ITM2BQ9Y287 266 aa9.58□□□□□ -0.88
NPLOC4-219ENST00000576713 HEY1Q9Y5J3 304 aa9.58□□□□□ -0.88
NPLOC4-219ENST00000576713 GVINP1Q7Z2Y8 2422 aa9.58□□□□□ -0.88
NPLOC4-219ENST00000576713 WDFY3Q8IZQ1 3526 aa9.58□□□□□ -0.88
NPLOC4-219ENST00000576713 FAM186AA6NE01 2351 aa9.57□□□□□ -0.88
NPLOC4-219ENST00000576713 ZSCAN5CA6NGD5 496 aaPredicted RBP9.57□□□□□ -0.88
NPLOC4-219ENST00000576713 FAM47DPA6NHR8 397 aa9.57□□□□□ -0.88
NPLOC4-219ENST00000576713 KCNK1O00180 336 aa9.57□□□□□ -0.88
NPLOC4-219ENST00000576713 WNT9AO14904 365 aa9.57□□□□□ -0.88
NPLOC4-219ENST00000576713 CST8O60676 142 aa9.57□□□□□ -0.88
NPLOC4-219ENST00000576713 SEMA4FO95754 770 aa9.57□□□□□ -0.88
NPLOC4-219ENST00000576713 UGT2B4P06133 528 aa9.57□□□□□ -0.88
NPLOC4-219ENST00000576713 CCDC175P0C221 793 aa9.57□□□□□ -0.88
NPLOC4-219ENST00000576713 EPHA1P21709 976 aa9.57□□□□□ -0.88
NPLOC4-219ENST00000576713 C5AR1P21730 350 aa9.57□□□□□ -0.88
NPLOC4-219ENST00000576713 GSTT1P30711 240 aa9.57□□□□□ -0.88
NPLOC4-219ENST00000576713 SERPINB6P35237 376 aa9.57□□□□□ -0.88
NPLOC4-219ENST00000576713 DHPSP49366 369 aaPredicted RBP9.57□□□□□ -0.88
NPLOC4-219ENST00000576713 SEMG2Q02383 582 aa9.57□□□□□ -0.88
NPLOC4-219ENST00000576713 ZBTB16Q05516 673 aa9.57□□□□□ -0.88
NPLOC4-219ENST00000576713 ZBTB17Q13105 803 aa9.57□□□□□ -0.88
NPLOC4-219ENST00000576713 E2F5Q15329 346 aa9.57□□□□□ -0.88
NPLOC4-219ENST00000576713 SF3A2Q15428 464 aaKnown RBP9.57□□□□□ -0.88
NPLOC4-219ENST00000576713 LAIR1Q6GTX8 287 aa9.57□□□□□ -0.88
NPLOC4-219ENST00000576713 NCEH1Q6PIU2 408 aa9.57□□□□□ -0.88
NPLOC4-219ENST00000576713 KDM7AQ6ZMT4 941 aa9.57□□□□□ -0.88
NPLOC4-219ENST00000576713 ZNF662Q6ZS27 426 aa9.57□□□□□ -0.88
NPLOC4-219ENST00000576713 VN1R5Q7Z5H4 357 aa9.57□□□□□ -0.88
NPLOC4-219ENST00000576713 VSIG1Q86XK7 387 aa9.57□□□□□ -0.88
NPLOC4-219ENST00000576713 WFDC8Q8IUA0 241 aa9.57□□□□□ -0.88
NPLOC4-219ENST00000576713 MAP7D3Q8IWC1 876 aa9.57□□□□□ -0.88
NPLOC4-219ENST00000576713 ABCA7Q8IZY2 2146 aa9.57□□□□□ -0.88
NPLOC4-219ENST00000576713 RYBPQ8N488 228 aaPredicted RBP9.57□□□□□ -0.88
NPLOC4-219ENST00000576713 ATPAF2Q8N5M1 289 aa9.57□□□□□ -0.88
NPLOC4-219ENST00000576713 TEX26Q8N6G2 289 aa9.57□□□□□ -0.88
NPLOC4-219ENST00000576713 CNTD1Q8N815 330 aa9.57□□□□□ -0.88
NPLOC4-219ENST00000576713 TMIEQ8NEW7 156 aa9.57□□□□□ -0.88
NPLOC4-219ENST00000576713 EXD1Q8NHP7 514 aa9.57□□□□□ -0.88
NPLOC4-219ENST00000576713 BIRC7Q96CA5 298 aa9.57□□□□□ -0.88
NPLOC4-219ENST00000576713 KLHL32Q96NJ5 620 aa9.57□□□□□ -0.88
NPLOC4-219ENST00000576713 SMIM14Q96QK8 99 aa9.57□□□□□ -0.88
NPLOC4-219ENST00000576713 PSKH2Q96QS6 385 aa9.57□□□□□ -0.88
NPLOC4-219ENST00000576713 CAAP1Q9H8G2 361 aa9.57□□□□□ -0.88
NPLOC4-219ENST00000576713 NUP205Q92621 2012 aa9.56□□□□□ -0.88
NPLOC4-219ENST00000576713 NUMA1Q14980 2115 aa9.56□□□□□ -0.88
NPLOC4-219ENST00000576713 RIF1Q5UIP0 2472 aaKnown RBP9.56□□□□□ -0.88
NPLOC4-219ENST00000576713 BCLAF3A2AJT9 711 aaKnown RBP9.56□□□□□ -0.88
NPLOC4-219ENST00000576713 APOL1O14791 398 aa9.56□□□□□ -0.88
NPLOC4-219ENST00000576713 MATN3O15232 486 aa9.56□□□□□ -0.88
NPLOC4-219ENST00000576713 PLRG1O43660 514 aaKnown RBP9.56□□□□□ -0.88
NPLOC4-219ENST00000576713 RNASEH1O60930 286 aaKnown RBP9.56□□□□□ -0.88
NPLOC4-219ENST00000576713 ZRANB2O95218 330 aaKnown RBP eCLIP9.56□□□□□ -0.88
NPLOC4-219ENST00000576713 PRKCGP05129 697 aa9.56□□□□□ -0.88
NPLOC4-219ENST00000576713 HLA-DQB2P05538 268 aa9.56□□□□□ -0.88
NPLOC4-219ENST00000576713 MPLP40238 635 aa9.56□□□□□ -0.88
NPLOC4-219ENST00000576713 GEMIN4P57678 1058 aaKnown RBP9.56□□□□□ -0.88
NPLOC4-219ENST00000576713 SNRPD1P62314 119 aaKnown RBP9.56□□□□□ -0.88
NPLOC4-219ENST00000576713 CREB5Q02930 508 aa9.56□□□□□ -0.88
NPLOC4-219ENST00000576713 ZNF33AQ06730 810 aa9.56□□□□□ -0.88
NPLOC4-219ENST00000576713 NIPAL4Q0D2K0 466 aa9.56□□□□□ -0.88
NPLOC4-219ENST00000576713 PRKD1Q15139 912 aaPredicted RBP9.56□□□□□ -0.88
NPLOC4-219ENST00000576713 ELF2Q15723 593 aa9.56□□□□□ -0.88
NPLOC4-219ENST00000576713 KCTD19Q17RG1 926 aaPredicted RBP9.56□□□□□ -0.88
NPLOC4-219ENST00000576713 TTC31Q49AM3 519 aaPredicted RBP9.56□□□□□ -0.88
NPLOC4-219ENST00000576713 TFDP3Q5H9I0 405 aa9.56□□□□□ -0.88
NPLOC4-219ENST00000576713 MEI1Q5TIA1 1274 aa9.56□□□□□ -0.88
NPLOC4-219ENST00000576713 LAYNQ6UX15 382 aa9.56□□□□□ -0.88
NPLOC4-219ENST00000576713 GDPD4Q6W3E5 623 aa9.56□□□□□ -0.88
NPLOC4-219ENST00000576713 USP30Q70CQ3 517 aa9.56□□□□□ -0.88
NPLOC4-219ENST00000576713 LPCAT2Q7L5N7 544 aa9.56□□□□□ -0.88
NPLOC4-219ENST00000576713 PEX26Q7Z412 305 aa9.56□□□□□ -0.88
NPLOC4-219ENST00000576713 SRLQ86TD4 932 aa9.56□□□□□ -0.88
NPLOC4-219ENST00000576713 CAMK1DQ8IU85 385 aa9.56□□□□□ -0.88
NPLOC4-219ENST00000576713 CCDC50Q8IVM0 306 aa9.56□□□□□ -0.88
NPLOC4-219ENST00000576713 RCOR2Q8IZ40 523 aa9.56□□□□□ -0.88
NPLOC4-219ENST00000576713 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP9.56□□□□□ -0.88
NPLOC4-219ENST00000576713 RNF10Q8N5U6 811 aaKnown RBP9.56□□□□□ -0.88
NPLOC4-219ENST00000576713 GANCQ8TET4 914 aa9.56□□□□□ -0.88
NPLOC4-219ENST00000576713 CASKIN2Q8WXE0 1202 aa9.56□□□□□ -0.88
NPLOC4-219ENST00000576713 HDAC11Q96DB2 347 aa9.56□□□□□ -0.88
NPLOC4-219ENST00000576713 GDAP1L1Q96MZ0 367 aa9.56□□□□□ -0.88
NPLOC4-219ENST00000576713 ZNF599Q96NL3 588 aa9.56□□□□□ -0.88
NPLOC4-219ENST00000576713 TSGA13Q96PP4 275 aa9.56□□□□□ -0.88
NPLOC4-219ENST00000576713 OMDQ99983 421 aa9.56□□□□□ -0.88
NPLOC4-219ENST00000576713 MGME1Q9BQP7 344 aa9.56□□□□□ -0.88
NPLOC4-219ENST00000576713 OSBPL8Q9BZF1 889 aa9.56□□□□□ -0.88
NPLOC4-219ENST00000576713 BTBD1Q9H0C5 482 aa9.56□□□□□ -0.88
NPLOC4-219ENST00000576713 NOD2Q9HC29 1040 aa9.56□□□□□ -0.88
NPLOC4-219ENST00000576713 VTI1BQ9UEU0 232 aa9.56□□□□□ -0.88
NPLOC4-219ENST00000576713 PILRBQ9UKJ0 227 aa9.56□□□□□ -0.88
NPLOC4-219ENST00000576713 AMFRQ9UKV5 643 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 104.4 ms