RNA–Protein interactions for RNA: ENST00000563207.1

USB1-208, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 5

Gene USB1, Length 464 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-208ENST00000563207 DYRK4Q9NR20 520 aa15.82■□□□□ 0.12
USB1-208ENST00000563207 HAUS2Q9NVX0 235 aa15.82■□□□□ 0.12
USB1-208ENST00000563207 MFHAS1Q9Y4C4 1052 aa15.82■□□□□ 0.12
USB1-208ENST00000563207 J3KR12 359 aa15.81■□□□□ 0.12
USB1-208ENST00000563207 APOC4-APOC2K7ER74 178 aa15.81■□□□□ 0.12
USB1-208ENST00000563207 PPP1R12AO14974 1030 aaPredicted RBP15.81■□□□□ 0.12
USB1-208ENST00000563207 FFAR2O15552 330 aa15.81■□□□□ 0.12
USB1-208ENST00000563207 RFPL3O75679 317 aa15.81■□□□□ 0.12
USB1-208ENST00000563207 GSRP00390 522 aa15.81■□□□□ 0.12
USB1-208ENST00000563207 APOC2P02655 101 aa15.81■□□□□ 0.12
USB1-208ENST00000563207 KRT10P13645 584 aa15.81■□□□□ 0.12
USB1-208ENST00000563207 HNRNPA2B1P22626 353 aaKnown RBP15.81■□□□□ 0.12
USB1-208ENST00000563207 DGKAP23743 735 aa15.81■□□□□ 0.12
USB1-208ENST00000563207 RENBPP51606 427 aa15.81■□□□□ 0.12
USB1-208ENST00000563207 SNRPD1P62314 119 aaKnown RBP15.81■□□□□ 0.12
USB1-208ENST00000563207 GBE1Q04446 702 aa15.81■□□□□ 0.12
USB1-208ENST00000563207 TARDBPQ13148 414 aaKnown RBP eCLIP15.81■□□□□ 0.12
USB1-208ENST00000563207 PROX2Q3B8N5 592 aa15.81■□□□□ 0.12
USB1-208ENST00000563207 FBXL19Q6PCT2 694 aa15.81■□□□□ 0.12
USB1-208ENST00000563207 Q6ZSR6 202 aa15.81■□□□□ 0.12
USB1-208ENST00000563207 RYBPQ8N488 228 aaPredicted RBP15.81■□□□□ 0.12
USB1-208ENST00000563207 P3H4Q92791 437 aa15.81■□□□□ 0.12
USB1-208ENST00000563207 OLFM3Q96PB7 478 aa15.81■□□□□ 0.12
USB1-208ENST00000563207 SLC17A9Q9BYT1 436 aa15.81■□□□□ 0.12
USB1-208ENST00000563207 AMACRQ9UHK6 382 aa15.81■□□□□ 0.12
USB1-208ENST00000563207 TPX2Q9ULW0 747 aaKnown RBP15.81■□□□□ 0.12
USB1-208ENST00000563207 HEY1Q9Y5J3 304 aa15.81■□□□□ 0.12
USB1-208ENST00000563207 IGLON5A6NGN9 336 aa15.8■□□□□ 0.12
USB1-208ENST00000563207 KRIT1O00522 736 aa15.8■□□□□ 0.12
USB1-208ENST00000563207 MATN3O15232 486 aa15.8■□□□□ 0.12
USB1-208ENST00000563207 ZNF189O75820 626 aaPredicted RBP15.8■□□□□ 0.12
USB1-208ENST00000563207 TMCC1O94876 653 aa15.8■□□□□ 0.12
USB1-208ENST00000563207 JUPP14923 745 aa15.8■□□□□ 0.12
USB1-208ENST00000563207 ITGB7P26010 798 aa15.8■□□□□ 0.12
USB1-208ENST00000563207 HSPA9P38646 679 aaKnown RBP15.8■□□□□ 0.12
USB1-208ENST00000563207 NEK3P51956 506 aa15.8■□□□□ 0.12
USB1-208ENST00000563207 PPIDQ08752 370 aaKnown RBP15.8■□□□□ 0.12
USB1-208ENST00000563207 NSUN2Q08J23 767 aaKnown RBP eCLIP15.8■□□□□ 0.12
USB1-208ENST00000563207 OVGP1Q12889 678 aa15.8■□□□□ 0.12
USB1-208ENST00000563207 SLC10A2Q12908 348 aaPredicted RBP15.8■□□□□ 0.12
USB1-208ENST00000563207 ZNF569Q5MCW4 686 aa15.8■□□□□ 0.12
USB1-208ENST00000563207 SEL1L2Q5TEA6 688 aa15.8■□□□□ 0.12
USB1-208ENST00000563207 HES3Q5TGS1 186 aa15.8■□□□□ 0.12
USB1-208ENST00000563207 NEK5Q6P3R8 708 aa15.8■□□□□ 0.12
USB1-208ENST00000563207 ABI3BPQ7Z7G0 1075 aa15.8■□□□□ 0.12
USB1-208ENST00000563207 TP53INP2Q8IXH6 220 aa15.8■□□□□ 0.12
USB1-208ENST00000563207 TTC13Q8NBP0 860 aa15.8■□□□□ 0.12
USB1-208ENST00000563207 TRIM44Q96DX7 344 aaPredicted RBP15.8■□□□□ 0.12
USB1-208ENST00000563207 LRIG1Q96JA1 1093 aa15.8■□□□□ 0.12
USB1-208ENST00000563207 TLR10Q9BXR5 811 aa15.8■□□□□ 0.12
USB1-208ENST00000563207 SEPT3Q9UH03 358 aa15.8■□□□□ 0.12
USB1-208ENST00000563207 KLF15Q9UIH9 416 aa15.8■□□□□ 0.12
USB1-208ENST00000563207 PCDHGA1Q9Y5H4 931 aa15.8■□□□□ 0.12
USB1-208ENST00000563207 FAM208BQ5VWN6 2430 aa15.79■□□□□ 0.12
USB1-208ENST00000563207 APC2O95996 2303 aa15.79■□□□□ 0.12
USB1-208ENST00000563207 USP27XA6NNY8 438 aa15.79■□□□□ 0.12
USB1-208ENST00000563207 HACD1B0YJ81 288 aa15.79■□□□□ 0.12
USB1-208ENST00000563207 YKT6O15498 198 aa15.79■□□□□ 0.12
USB1-208ENST00000563207 INSIG1O15503 277 aa15.79■□□□□ 0.12
USB1-208ENST00000563207 NEBLO76041 1014 aa15.79■□□□□ 0.12
USB1-208ENST00000563207 IGSF6O95976 241 aa15.79■□□□□ 0.12
USB1-208ENST00000563207 UGT2B4P06133 528 aa15.79■□□□□ 0.12
USB1-208ENST00000563207 CKMT2P17540 419 aa15.79■□□□□ 0.12
USB1-208ENST00000563207 AKT2P31751 481 aa15.79■□□□□ 0.12
USB1-208ENST00000563207 NUDT1P36639 197 aa15.79■□□□□ 0.12
USB1-208ENST00000563207 CSNK1DP48730 415 aa15.79■□□□□ 0.12
USB1-208ENST00000563207 DYNLT1P63172 113 aa15.79■□□□□ 0.12
USB1-208ENST00000563207 RAD51Q06609 339 aa15.79■□□□□ 0.12
USB1-208ENST00000563207 XRCC4Q13426 336 aa15.79■□□□□ 0.12
USB1-208ENST00000563207 FZD2Q14332 565 aa15.79■□□□□ 0.12
USB1-208ENST00000563207 LBRQ14739 615 aaKnown RBP15.79■□□□□ 0.12
USB1-208ENST00000563207 GRM3Q14832 879 aa15.79■□□□□ 0.12
USB1-208ENST00000563207 CYTH1Q15438 398 aa15.79■□□□□ 0.12
USB1-208ENST00000563207 CCDC181Q5TID7 509 aa15.79■□□□□ 0.12
USB1-208ENST00000563207 MARC1Q5VT66 337 aa15.79■□□□□ 0.12
USB1-208ENST00000563207 ARHGAP36Q6ZRI8 547 aa15.79■□□□□ 0.12
USB1-208ENST00000563207 PTAR1Q7Z6K3 402 aaPredicted RBP15.79■□□□□ 0.12
USB1-208ENST00000563207 TMPRSS12Q86WS5 348 aa15.79■□□□□ 0.12
USB1-208ENST00000563207 OXR1Q8N573 874 aa15.79■□□□□ 0.12
USB1-208ENST00000563207 TEX26Q8N6G2 289 aa15.79■□□□□ 0.12
USB1-208ENST00000563207 CCNYQ8ND76 341 aa15.79■□□□□ 0.12
USB1-208ENST00000563207 OR2AP1Q8NGE2 309 aa15.79■□□□□ 0.12
USB1-208ENST00000563207 GDAP1L1Q96MZ0 367 aa15.79■□□□□ 0.12
USB1-208ENST00000563207 KLHL32Q96NJ5 620 aa15.79■□□□□ 0.12
USB1-208ENST00000563207 PSKH2Q96QS6 385 aa15.79■□□□□ 0.12
USB1-208ENST00000563207 KLF6Q99612 283 aaPredicted RBP15.79■□□□□ 0.12
USB1-208ENST00000563207 HEMGNQ9BXL5 484 aa15.79■□□□□ 0.12
USB1-208ENST00000563207 PNMA8BQ9ULN7 279 aaPredicted RBP15.79■□□□□ 0.12
USB1-208ENST00000563207 LRRK1Q38SD2 2015 aa15.78■□□□□ 0.12
USB1-208ENST00000563207 LY6G6EA0A0G2JKS1 128 aa15.78■□□□□ 0.12
USB1-208ENST00000563207 C16orf96A6NNT2 1141 aa15.78■□□□□ 0.12
USB1-208ENST00000563207 CASC3O15234 703 aaKnown RBP15.78■□□□□ 0.12
USB1-208ENST00000563207 MTSS1O43312 755 aa15.78■□□□□ 0.12
USB1-208ENST00000563207 MAGEC1O60732 1142 aa15.78■□□□□ 0.12
USB1-208ENST00000563207 PIAS2O75928 621 aa15.78■□□□□ 0.12
USB1-208ENST00000563207 POP4O95707 220 aaKnown RBP15.78■□□□□ 0.12
USB1-208ENST00000563207 PEX11BO96011 259 aa15.78■□□□□ 0.12
USB1-208ENST00000563207 RHOAP61586 193 aa15.78■□□□□ 0.12
USB1-208ENST00000563207 INSM1Q01101 510 aaPredicted RBP15.78■□□□□ 0.12
USB1-208ENST00000563207 ADCY2Q08462 1091 aa15.78■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms