RNA–Protein interactions for RNA: ENST00000553904.1

FOXN3-205, Transcript of forkhead box N3, humanhuman

TSL 3

Gene FOXN3, Length 337 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-205ENST00000553904 TBC1D25Q3MII6 688 aa6.55□□□□□ -1.36
FOXN3-205ENST00000553904 LRRC73Q5JTD7 316 aa6.55□□□□□ -1.36
FOXN3-205ENST00000553904 ARMC12Q5T9G4 340 aa6.55□□□□□ -1.36
FOXN3-205ENST00000553904 CDCP2Q5VXM1 449 aa6.55□□□□□ -1.36
FOXN3-205ENST00000553904 HGSNATQ68CP4 663 aa6.55□□□□□ -1.36
FOXN3-205ENST00000553904 LIPIQ6XZB0 460 aa6.55□□□□□ -1.36
FOXN3-205ENST00000553904 USP45Q70EL2 814 aa6.55□□□□□ -1.36
FOXN3-205ENST00000553904 DPPA4Q7L190 304 aa6.55□□□□□ -1.36
FOXN3-205ENST00000553904 TAF8Q7Z7C8 310 aa6.55□□□□□ -1.36
FOXN3-205ENST00000553904 LUZP1Q86V48 1076 aa6.55□□□□□ -1.36
FOXN3-205ENST00000553904 MARCH9Q86YJ5 346 aa6.55□□□□□ -1.36
FOXN3-205ENST00000553904 RAVER1Q8IY67 606 aaKnown RBP6.55□□□□□ -1.36
FOXN3-205ENST00000553904 ATPAF2Q8N5M1 289 aa6.55□□□□□ -1.36
FOXN3-205ENST00000553904 LSM14AQ8ND56 463 aaKnown RBP6.55□□□□□ -1.36
FOXN3-205ENST00000553904 OR8K1Q8NGG5 319 aa6.55□□□□□ -1.36
FOXN3-205ENST00000553904 OR56A4Q8NGH8 313 aa6.55□□□□□ -1.36
FOXN3-205ENST00000553904 TSACCQ96A04 125 aaPredicted RBP6.55□□□□□ -1.36
FOXN3-205ENST00000553904 ECHDC3Q96DC8 303 aa6.55□□□□□ -1.36
FOXN3-205ENST00000553904 SCRN2Q96FV2 425 aa6.55□□□□□ -1.36
FOXN3-205ENST00000553904 TMEM74Q96NL1 305 aa6.55□□□□□ -1.36
FOXN3-205ENST00000553904 CSPG4P5Q96PW8 444 aa6.55□□□□□ -1.36
FOXN3-205ENST00000553904 FUCA2Q9BTY2 467 aa6.55□□□□□ -1.36
FOXN3-205ENST00000553904 NUP85Q9BW27 656 aa6.55□□□□□ -1.36
FOXN3-205ENST00000553904 BOCQ9BWV1 1114 aa6.55□□□□□ -1.36
FOXN3-205ENST00000553904 MAK16Q9BXY0 300 aaKnown RBP6.55□□□□□ -1.36
FOXN3-205ENST00000553904 STRADBQ9C0K7 418 aa6.55□□□□□ -1.36
FOXN3-205ENST00000553904 THAP2Q9H0W7 228 aa6.55□□□□□ -1.36
FOXN3-205ENST00000553904 PHPT1Q9NRX4 125 aaPredicted RBP6.55□□□□□ -1.36
FOXN3-205ENST00000553904 STAU2Q9NUL3 570 aaKnown RBP eCLIP6.55□□□□□ -1.36
FOXN3-205ENST00000553904 AKAP7Q9P0M2 348 aaPredicted RBP6.55□□□□□ -1.36
FOXN3-205ENST00000553904 CTTNBP2NLQ9P2B4 639 aa6.55□□□□□ -1.36
FOXN3-205ENST00000553904 UVRAGQ9P2Y5 699 aa6.55□□□□□ -1.36
FOXN3-205ENST00000553904 KLF15Q9UIH9 416 aa6.55□□□□□ -1.36
FOXN3-205ENST00000553904 GGT7Q9UJ14 662 aa6.55□□□□□ -1.36
FOXN3-205ENST00000553904 MOSPD1Q9UJG1 213 aa6.55□□□□□ -1.36
FOXN3-205ENST00000553904 ANAPC7Q9UJX3 599 aa6.55□□□□□ -1.36
FOXN3-205ENST00000553904 GPR34Q9UPC5 381 aa6.55□□□□□ -1.36
FOXN3-205ENST00000553904 PCDHGA8Q9Y5G5 932 aa6.55□□□□□ -1.36
FOXN3-205ENST00000553904 DGKBQ9Y6T7 804 aa6.55□□□□□ -1.36
FOXN3-205ENST00000553904 A0A087X0T9 212 aa6.54□□□□□ -1.36
FOXN3-205ENST00000553904 TK2O00142 265 aa6.54□□□□□ -1.36
FOXN3-205ENST00000553904 TRAFD1O14545 582 aaPredicted RBP6.54□□□□□ -1.36
FOXN3-205ENST00000553904 MATN3O15232 486 aa6.54□□□□□ -1.36
FOXN3-205ENST00000553904 HTRA2O43464 458 aaPredicted RBP6.54□□□□□ -1.36
FOXN3-205ENST00000553904 BRINP1O60477 761 aa6.54□□□□□ -1.36
FOXN3-205ENST00000553904 MAFKO60675 156 aa6.54□□□□□ -1.36
FOXN3-205ENST00000553904 DXOO77932 396 aaKnown RBP6.54□□□□□ -1.36
FOXN3-205ENST00000553904 CPP00450 1065 aa6.54□□□□□ -1.36
FOXN3-205ENST00000553904 PCCBP05166 539 aa6.54□□□□□ -1.36
FOXN3-205ENST00000553904 FAM228BP0C875 321 aa6.54□□□□□ -1.36
FOXN3-205ENST00000553904 PNLIPP16233 465 aa6.54□□□□□ -1.36
FOXN3-205ENST00000553904 GLB1P16278 677 aa6.54□□□□□ -1.36
FOXN3-205ENST00000553904 ITIH2P19823 946 aa6.54□□□□□ -1.36
FOXN3-205ENST00000553904 MX2P20592 715 aa6.54□□□□□ -1.36
FOXN3-205ENST00000553904 TGM2P21980 687 aa6.54□□□□□ -1.36
FOXN3-205ENST00000553904 CCNCP24863 283 aa6.54□□□□□ -1.36
FOXN3-205ENST00000553904 IL1R2P27930 398 aa6.54□□□□□ -1.36
FOXN3-205ENST00000553904 HNRNPH3P31942 346 aaKnown RBP6.54□□□□□ -1.36
FOXN3-205ENST00000553904 CASP14P31944 242 aa6.54□□□□□ -1.36
FOXN3-205ENST00000553904 VIPR1P32241 457 aa6.54□□□□□ -1.36
FOXN3-205ENST00000553904 MMP12P39900 470 aa6.54□□□□□ -1.36
FOXN3-205ENST00000553904 EPHB1P54762 984 aa6.54□□□□□ -1.36
FOXN3-205ENST00000553904 PCBP4P57723 403 aaKnown RBP6.54□□□□□ -1.36
FOXN3-205ENST00000553904 KIAA1024LP59773 190 aa6.54□□□□□ -1.36
FOXN3-205ENST00000553904 GABREP78334 506 aa6.54□□□□□ -1.36
FOXN3-205ENST00000553904 SMTNL2Q2TAL5 461 aa6.54□□□□□ -1.36
FOXN3-205ENST00000553904 SPECC1LQ69YQ0 1117 aa6.54□□□□□ -1.36
FOXN3-205ENST00000553904 PNCKQ6P2M8 343 aa6.54□□□□□ -1.36
FOXN3-205ENST00000553904 GUSBP11Q6P575 273 aa6.54□□□□□ -1.36
FOXN3-205ENST00000553904 OGFOD3Q6PK18 319 aa6.54□□□□□ -1.36
FOXN3-205ENST00000553904 IGF2-ASQ6U949 168 aa6.54□□□□□ -1.36
FOXN3-205ENST00000553904 BZW1Q7L1Q6 419 aaKnown RBP6.54□□□□□ -1.36
FOXN3-205ENST00000553904 GPR155Q7Z3F1 870 aa6.54□□□□□ -1.36
FOXN3-205ENST00000553904 NLRP8Q86W28 1048 aa6.54□□□□□ -1.36
FOXN3-205ENST00000553904 ARHGAP12Q8IWW6 846 aa6.54□□□□□ -1.36
FOXN3-205ENST00000553904 ARL10Q8N8L6 244 aa6.54□□□□□ -1.36
FOXN3-205ENST00000553904 NETO2Q8NC67 525 aa6.54□□□□□ -1.36
FOXN3-205ENST00000553904 FAM46DQ8NEK8 389 aa6.54□□□□□ -1.36
FOXN3-205ENST00000553904 WDR36Q8NI36 951 aaKnown RBP6.54□□□□□ -1.36
FOXN3-205ENST00000553904 KIAA1524Q8TCG1 905 aa6.54□□□□□ -1.36
FOXN3-205ENST00000553904 TMEM159Q96B96 161 aa6.54□□□□□ -1.36
FOXN3-205ENST00000553904 ZNF830Q96NB3 372 aaPredicted RBP6.54□□□□□ -1.36
FOXN3-205ENST00000553904 SLC46A1Q96NT5 459 aa6.54□□□□□ -1.36
FOXN3-205ENST00000553904 PEBP4Q96S96 227 aa6.54□□□□□ -1.36
FOXN3-205ENST00000553904 RBM15Q96T37 977 aaKnown RBP eCLIP6.54□□□□□ -1.368e-13■■□□□ 13.1
FOXN3-205ENST00000553904 LGMNQ99538 433 aa6.54□□□□□ -1.36
FOXN3-205ENST00000553904 CCDC3Q9BQI4 270 aa6.54□□□□□ -1.36
FOXN3-205ENST00000553904 MGME1Q9BQP7 344 aa6.54□□□□□ -1.36
FOXN3-205ENST00000553904 LRRC61Q9BV99 259 aa6.54□□□□□ -1.36
FOXN3-205ENST00000553904 GSDMCQ9BYG8 508 aa6.54□□□□□ -1.36
FOXN3-205ENST00000553904 POLR1EQ9GZS1 481 aaKnown RBP6.54□□□□□ -1.36
FOXN3-205ENST00000553904 DPEP2Q9H4A9 486 aa6.54□□□□□ -1.36
FOXN3-205ENST00000553904 WDR26Q9H7D7 661 aa6.54□□□□□ -1.36
FOXN3-205ENST00000553904 PCDH18Q9HCL0 1135 aa6.54□□□□□ -1.36
FOXN3-205ENST00000553904 EIF2AK3Q9NZJ5 1116 aaKnown RBP6.54□□□□□ -1.36
FOXN3-205ENST00000553904 IFNKQ9P0W0 207 aa6.54□□□□□ -1.36
FOXN3-205ENST00000553904 COQ6Q9Y2Z9 468 aa6.54□□□□□ -1.36
FOXN3-205ENST00000553904 OR1A2Q9Y585 309 aa6.54□□□□□ -1.36
FOXN3-205ENST00000553904 PCDHGC4Q9Y5F7 938 aa6.54□□□□□ -1.36
FOXN3-205ENST00000553904 CACNA1EQ15878 2313 aa6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms