RNA–Protein interactions for RNA: ENST00000533801.6

ATP2C1-224, Transcript of ATPase secretory pathway Ca2+ transporting 1, humanhuman

TSL 1 (best) BASIC

Gene ATP2C1, Length 3,690 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C1-224ENST00000533801 ATXN7L2Q5T6C5 722 aaPredicted RBP15.99■□□□□ 0.15
ATP2C1-224ENST00000533801 RNF219Q5W0B1 726 aaPredicted RBP15.99■□□□□ 0.15
ATP2C1-224ENST00000533801 MYLK4Q86YV6 388 aaPredicted RBP15.99■□□□□ 0.15
ATP2C1-224ENST00000533801 BBS5Q8N3I7 341 aa15.99■□□□□ 0.15
ATP2C1-224ENST00000533801 SPDL1Q96EA4 605 aa15.99■□□□□ 0.15
ATP2C1-224ENST00000533801 CASD1Q96PB1 797 aa15.99■□□□□ 0.15
ATP2C1-224ENST00000533801 TNFRSF12AQ9NP84 129 aa15.99■□□□□ 0.15
ATP2C1-224ENST00000533801 UBXN8O00124 270 aa15.99■□□□□ 0.15
ATP2C1-224ENST00000533801 CD3EAPO15446 510 aaKnown RBP15.99■□□□□ 0.15
ATP2C1-224ENST00000533801 BMP1P13497 986 aa15.99■□□□□ 0.15
ATP2C1-224ENST00000533801 CRABP2P29373 138 aa15.99■□□□□ 0.15
ATP2C1-224ENST00000533801 KCNC1P48547 511 aa15.99■□□□□ 0.15
ATP2C1-224ENST00000533801 BFSP2Q13515 415 aa15.99■□□□□ 0.15
ATP2C1-224ENST00000533801 CYLC2Q14093 348 aaPredicted RBP15.99■□□□□ 0.15
ATP2C1-224ENST00000533801 PITRM1Q5JRX3 1037 aa15.99■□□□□ 0.15
ATP2C1-224ENST00000533801 CLEC14AQ86T13 490 aa15.99■□□□□ 0.15
ATP2C1-224ENST00000533801 SPATA24Q86W54 205 aa15.99■□□□□ 0.15
ATP2C1-224ENST00000533801 CALML6Q8TD86 181 aa15.99■□□□□ 0.15
ATP2C1-224ENST00000533801 ERLEC1Q96DZ1 483 aa15.99■□□□□ 0.15
ATP2C1-224ENST00000533801 C1QTNF1Q9BXJ1 281 aa15.99■□□□□ 0.15
ATP2C1-224ENST00000533801 YIPF3Q9GZM5 350 aa15.99■□□□□ 0.15
ATP2C1-224ENST00000533801 SEMA4BQ9NPR2 832 aaPredicted RBP15.99■□□□□ 0.15
ATP2C1-224ENST00000533801 DNAJC28Q9NX36 388 aa15.99■□□□□ 0.15
ATP2C1-224ENST00000533801 UBA2Q9UBT2 640 aaPredicted RBP15.99■□□□□ 0.15
ATP2C1-224ENST00000533801 DNMT3LQ9UJW3 386 aa15.99■□□□□ 0.15
ATP2C1-224ENST00000533801 VPS28Q9UK41 221 aa15.99■□□□□ 0.15
ATP2C1-224ENST00000533801 ANGPTL2Q9UKU9 493 aa15.99■□□□□ 0.15
ATP2C1-224ENST00000533801 TRPM7Q96QT4 1865 aa15.99■□□□□ 0.15
ATP2C1-224ENST00000533801 SYN3O14994 580 aa15.98■□□□□ 0.15
ATP2C1-224ENST00000533801 NDUFS3O75489 264 aa15.98■□□□□ 0.15
ATP2C1-224ENST00000533801 SRP72O76094 671 aaKnown RBP15.98■□□□□ 0.15
ATP2C1-224ENST00000533801 LTA4HP09960 611 aaKnown RBP15.98■□□□□ 0.15
ATP2C1-224ENST00000533801 GNA12Q03113 381 aa15.98■□□□□ 0.15
ATP2C1-224ENST00000533801 KIAA0930Q6ICG6 404 aaPredicted RBP15.98■□□□□ 0.15
ATP2C1-224ENST00000533801 TMEM154Q6P9G4 183 aa15.98■□□□□ 0.15
ATP2C1-224ENST00000533801 RPAINQ86UA6 219 aa15.98■□□□□ 0.15
ATP2C1-224ENST00000533801 C2CD4AQ8NCU7 369 aaPredicted RBP15.98■□□□□ 0.15
ATP2C1-224ENST00000533801 STYXQ8WUJ0 223 aa15.98■□□□□ 0.15
ATP2C1-224ENST00000533801 DRC3Q9H069 523 aa15.98■□□□□ 0.15
ATP2C1-224ENST00000533801 SCUBE2Q9NQ36 999 aa15.98■□□□□ 0.15
ATP2C1-224ENST00000533801 TMEM248Q9NWD8 314 aa15.98■□□□□ 0.15
ATP2C1-224ENST00000533801 MOXD2PA6NHM9 499 aa15.98■□□□□ 0.15
ATP2C1-224ENST00000533801 IQCF5A8MTL0 148 aa15.98■□□□□ 0.15
ATP2C1-224ENST00000533801 RAG1P15918 1043 aa15.98■□□□□ 0.15
ATP2C1-224ENST00000533801 CHRM3P20309 590 aa15.98■□□□□ 0.15
ATP2C1-224ENST00000533801 GPR17Q13304 367 aa15.98■□□□□ 0.15
ATP2C1-224ENST00000533801 SERINC3Q13530 473 aa15.98■□□□□ 0.15
ATP2C1-224ENST00000533801 TMCO4Q5TGY1 634 aa15.98■□□□□ 0.15
ATP2C1-224ENST00000533801 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP15.98■□□□□ 0.15
ATP2C1-224ENST00000533801 UMODL1-AS1Q8N2C9 162 aa15.98■□□□□ 0.15
ATP2C1-224ENST00000533801 PTGR2Q8N8N7 351 aaPredicted RBP15.98■□□□□ 0.15
ATP2C1-224ENST00000533801 SPPL2BQ8TCT7 592 aa15.98■□□□□ 0.15
ATP2C1-224ENST00000533801 KCNA7Q96RP8 456 aa15.98■□□□□ 0.15
ATP2C1-224ENST00000533801 SLC39A3Q9BRY0 314 aa15.98■□□□□ 0.15
ATP2C1-224ENST00000533801 PRKD2Q9BZL6 878 aa15.98■□□□□ 0.15
ATP2C1-224ENST00000533801 FCF1Q9Y324 198 aaKnown RBP15.98■□□□□ 0.15
ATP2C1-224ENST00000533801 OR6C75A6NL08 312 aa15.98■□□□□ 0.15
ATP2C1-224ENST00000533801 A8MT66 165 aa15.98■□□□□ 0.15
ATP2C1-224ENST00000533801 WFS1O76024 890 aa15.98■□□□□ 0.15
ATP2C1-224ENST00000533801 RPLP2P05387 115 aaKnown RBP15.98■□□□□ 0.15
ATP2C1-224ENST00000533801 AOC1P19801 751 aa15.98■□□□□ 0.15
ATP2C1-224ENST00000533801 ECT2LQ008S8 904 aa15.98■□□□□ 0.15
ATP2C1-224ENST00000533801 TRMT5Q32P41 509 aaKnown RBP15.98■□□□□ 0.15
ATP2C1-224ENST00000533801 CILP2Q8IUL8 1156 aa15.98■□□□□ 0.15
ATP2C1-224ENST00000533801 TRPC4APQ8TEL6 797 aa15.98■□□□□ 0.15
ATP2C1-224ENST00000533801 NSUN5Q96P11 429 aaKnown RBP15.98■□□□□ 0.15
ATP2C1-224ENST00000533801 TRIM8Q9BZR9 551 aa15.98■□□□□ 0.15
ATP2C1-224ENST00000533801 ANKRD6Q9Y2G4 727 aa15.98■□□□□ 0.15
ATP2C1-224ENST00000533801 MATN2O00339 956 aa15.97■□□□□ 0.15
ATP2C1-224ENST00000533801 ZNF195O14628 629 aa15.97■□□□□ 0.15
ATP2C1-224ENST00000533801 COCHO43405 550 aa15.97■□□□□ 0.15
ATP2C1-224ENST00000533801 APOA4P06727 396 aa15.97■□□□□ 0.15
ATP2C1-224ENST00000533801 ALDH1A3P47895 512 aa15.97■□□□□ 0.15
ATP2C1-224ENST00000533801 NDST2P52849 883 aa15.97■□□□□ 0.15
ATP2C1-224ENST00000533801 RALGDSQ12967 914 aa15.97■□□□□ 0.15
ATP2C1-224ENST00000533801 HECTD3Q5T447 861 aa15.97■□□□□ 0.15
ATP2C1-224ENST00000533801 CUZD1Q86UP6 607 aa15.97■□□□□ 0.15
ATP2C1-224ENST00000533801 KBTBD2Q8IY47 623 aa15.97■□□□□ 0.15
ATP2C1-224ENST00000533801 ST13P5Q8NFI4 369 aaPredicted RBP15.97■□□□□ 0.15
ATP2C1-224ENST00000533801 GABPB2Q8TAK5 448 aaPredicted RBP15.97■□□□□ 0.15
ATP2C1-224ENST00000533801 MRPL57Q9BQC6 102 aaKnown RBP15.97■□□□□ 0.15
ATP2C1-224ENST00000533801 TREX1Q9NSU2 369 aa15.97■□□□□ 0.15
ATP2C1-224ENST00000533801 TRPM5Q9NZQ8 1165 aa15.97■□□□□ 0.15
ATP2C1-224ENST00000533801 GRID2O43424 1007 aa15.97■□□□□ 0.15
ATP2C1-224ENST00000533801 ACSL4O60488 711 aa15.97■□□□□ 0.15
ATP2C1-224ENST00000533801 MMP2P08253 660 aa15.97■□□□□ 0.15
ATP2C1-224ENST00000533801 PAX7P23759 505 aa15.97■□□□□ 0.15
ATP2C1-224ENST00000533801 ATP5F1P24539 256 aaPredicted RBP15.97■□□□□ 0.15
ATP2C1-224ENST00000533801 SEMA3AQ14563 771 aa15.97■□□□□ 0.15
ATP2C1-224ENST00000533801 LHX8Q68G74 356 aa15.97■□□□□ 0.15
ATP2C1-224ENST00000533801 TRAF7Q6Q0C0 670 aa15.97■□□□□ 0.15
ATP2C1-224ENST00000533801 CYP2R1Q6VVX0 501 aa15.97■□□□□ 0.15
ATP2C1-224ENST00000533801 NPAS4Q8IUM7 802 aa15.97■□□□□ 0.15
ATP2C1-224ENST00000533801 RNF38Q9H0F5 515 aa15.97■□□□□ 0.15
ATP2C1-224ENST00000533801 SLC24A3Q9HC58 644 aa15.97■□□□□ 0.15
ATP2C1-224ENST00000533801 MID1IP1Q9NPA3 183 aa15.97■□□□□ 0.15
ATP2C1-224ENST00000533801 PCDHB9Q9Y5E1 797 aa15.97■□□□□ 0.15
ATP2C1-224ENST00000533801 SPO11Q9Y5K1 396 aa15.97■□□□□ 0.15
ATP2C1-224ENST00000533801 OR1I1O60431 355 aa15.97■□□□□ 0.15
ATP2C1-224ENST00000533801 SEC24AO95486 1093 aa15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms