RNA–Protein interactions for RNA: ENST00000518743.1

HMGB1P23-201, Transcript of high mobility group box 1 pseudogene 23, humanhuman

BASIC

Gene HMGB1P23, Length 568 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P23-201ENST00000518743 DUSP12Q9UNI6 340 aa4.99□□□□□ -1.61
HMGB1P23-201ENST00000518743 NUDCQ9Y266 331 aa4.99□□□□□ -1.61
HMGB1P23-201ENST00000518743 SPG11Q96JI7 2443 aa4.99□□□□□ -1.61
HMGB1P23-201ENST00000518743 TLN1Q9Y490 2541 aaKnown RBP4.99□□□□□ -1.61
HMGB1P23-201ENST00000518743 PATJQ8NI35 1801 aa4.99□□□□□ -1.61
HMGB1P23-201ENST00000518743 GREB1Q4ZG55 1949 aa4.99□□□□□ -1.61
HMGB1P23-201ENST00000518743 SPTBN1Q01082 2364 aaKnown RBP4.98□□□□□ -1.61
HMGB1P23-201ENST00000518743 CCDC187A0A096LP49 1063 aa4.98□□□□□ -1.61
HMGB1P23-201ENST00000518743 FAM170AA1A519 330 aa4.98□□□□□ -1.61
HMGB1P23-201ENST00000518743 C5orf67F2Z3F1 127 aa4.98□□□□□ -1.61
HMGB1P23-201ENST00000518743 CTAGE5O15320 804 aa4.98□□□□□ -1.61
HMGB1P23-201ENST00000518743 NARSO43776 548 aaKnown RBP4.98□□□□□ -1.61
HMGB1P23-201ENST00000518743 DHX16O60231 1041 aaKnown RBP4.98□□□□□ -1.61
HMGB1P23-201ENST00000518743 DOK2O60496 412 aa4.98□□□□□ -1.61
HMGB1P23-201ENST00000518743 PTP4A3O75365 173 aa4.98□□□□□ -1.61
HMGB1P23-201ENST00000518743 TJP3O95049 919 aa4.98□□□□□ -1.61
HMGB1P23-201ENST00000518743 MMP3P08254 477 aa4.98□□□□□ -1.61
HMGB1P23-201ENST00000518743 PPP3CBP16298 524 aa4.98□□□□□ -1.61
HMGB1P23-201ENST00000518743 CDH2P19022 906 aaPredicted RBP4.98□□□□□ -1.61
HMGB1P23-201ENST00000518743 EPHA8P29322 1005 aaPredicted RBP4.98□□□□□ -1.61
HMGB1P23-201ENST00000518743 KRT20P35900 424 aa4.98□□□□□ -1.61
HMGB1P23-201ENST00000518743 MLH1P40692 756 aa4.98□□□□□ -1.61
HMGB1P23-201ENST00000518743 SCNN1GP51170 649 aa4.98□□□□□ -1.61
HMGB1P23-201ENST00000518743 RPL7AP62424 266 aaKnown RBP4.98□□□□□ -1.61
HMGB1P23-201ENST00000518743 NEXNQ0ZGT2 675 aa4.98□□□□□ -1.61
HMGB1P23-201ENST00000518743 CHAF1BQ13112 559 aa4.98□□□□□ -1.61
HMGB1P23-201ENST00000518743 RESTQ13127 1097 aa4.98□□□□□ -1.61
HMGB1P23-201ENST00000518743 ALKBH1Q13686 389 aaKnown RBP4.98□□□□□ -1.61
HMGB1P23-201ENST00000518743 COG2Q14746 738 aa4.98□□□□□ -1.61
HMGB1P23-201ENST00000518743 TBCCQ15814 346 aa4.98□□□□□ -1.61
HMGB1P23-201ENST00000518743 LY6KQ17RY6 165 aa4.98□□□□□ -1.61
HMGB1P23-201ENST00000518743 KRT24Q2M2I5 525 aa4.98□□□□□ -1.61
HMGB1P23-201ENST00000518743 SHROOM1Q2M3G4 852 aaPredicted RBP4.98□□□□□ -1.61
HMGB1P23-201ENST00000518743 BEAN1Q3B7T3 259 aa4.98□□□□□ -1.61
HMGB1P23-201ENST00000518743 ZNF766Q5HY98 468 aa4.98□□□□□ -1.61
HMGB1P23-201ENST00000518743 SNX30Q5VWJ9 437 aa4.98□□□□□ -1.61
HMGB1P23-201ENST00000518743 ANKRD54Q6NXT1 300 aa4.98□□□□□ -1.61
HMGB1P23-201ENST00000518743 PDXDC1Q6P996 788 aa4.98□□□□□ -1.61
HMGB1P23-201ENST00000518743 CYP20A1Q6UW02 462 aa4.98□□□□□ -1.61
HMGB1P23-201ENST00000518743 H1FNTQ75WM6 255 aaPredicted RBP4.98□□□□□ -1.61
HMGB1P23-201ENST00000518743 LNX2Q8N448 690 aa4.98□□□□□ -1.61
HMGB1P23-201ENST00000518743 POU5F2Q8N7G0 328 aa4.98□□□□□ -1.61
HMGB1P23-201ENST00000518743 ZBTB44Q8NCP5 570 aa4.98□□□□□ -1.61
HMGB1P23-201ENST00000518743 CAGE1Q8TC20 777 aa4.98□□□□□ -1.61
HMGB1P23-201ENST00000518743 METTL6Q8TCB7 284 aa4.98□□□□□ -1.61
HMGB1P23-201ENST00000518743 CREB3L4Q8TEY5 395 aa4.98□□□□□ -1.61
HMGB1P23-201ENST00000518743 XAGE5Q8WWM1 108 aa4.98□□□□□ -1.61
HMGB1P23-201ENST00000518743 POMGNT1Q8WZA1 660 aa4.98□□□□□ -1.61
HMGB1P23-201ENST00000518743 PTCD3Q96EY7 689 aaKnown RBP4.98□□□□□ -1.61
HMGB1P23-201ENST00000518743 TTC14Q96N46 770 aa4.98□□□□□ -1.61
HMGB1P23-201ENST00000518743 LENG8Q96PV6 779 aaPredicted RBP4.98□□□□□ -1.61
HMGB1P23-201ENST00000518743 RANBP17Q9H2T7 1088 aaKnown RBP4.98□□□□□ -1.61
HMGB1P23-201ENST00000518743 RMI1Q9H9A7 625 aa4.98□□□□□ -1.61
HMGB1P23-201ENST00000518743 HCFC1R1Q9NWW0 138 aa4.98□□□□□ -1.61
HMGB1P23-201ENST00000518743 AMFRQ9UKV5 643 aa4.98□□□□□ -1.61
HMGB1P23-201ENST00000518743 AHCTF1Q8WYP5 2266 aa4.98□□□□□ -1.61
HMGB1P23-201ENST00000518743 C11orf97A0A1B0GVM6 126 aaPredicted RBP4.97□□□□□ -1.61
HMGB1P23-201ENST00000518743 A0A1W2PRQ8 180 aa4.97□□□□□ -1.61
HMGB1P23-201ENST00000518743 AGAP5A6NIR3 686 aa4.97□□□□□ -1.61
HMGB1P23-201ENST00000518743 AHRRA9YTQ3 701 aa4.97□□□□□ -1.61
HMGB1P23-201ENST00000518743 TEX22C9J3V5 150 aa4.97□□□□□ -1.61
HMGB1P23-201ENST00000518743 ZNF623O75123 536 aa4.97□□□□□ -1.61
HMGB1P23-201ENST00000518743 SEC14L2O76054 403 aa4.97□□□□□ -1.61
HMGB1P23-201ENST00000518743 SLC25A27O95847 323 aa4.97□□□□□ -1.61
HMGB1P23-201ENST00000518743 C8AP07357 584 aa4.97□□□□□ -1.61
HMGB1P23-201ENST00000518743 CYP21A2P08686 494 aa4.97□□□□□ -1.61
HMGB1P23-201ENST00000518743 TMIGD3P0DMS9 266 aaPredicted RBP4.97□□□□□ -1.61
HMGB1P23-201ENST00000518743 GP1BBP13224 206 aa4.97□□□□□ -1.61
HMGB1P23-201ENST00000518743 COX7A2P14406 83 aa4.97□□□□□ -1.61
HMGB1P23-201ENST00000518743 LAG3P18627 525 aa4.97□□□□□ -1.61
HMGB1P23-201ENST00000518743 ABCD1P33897 745 aa4.97□□□□□ -1.61
HMGB1P23-201ENST00000518743 PSMB10P40306 273 aa4.97□□□□□ -1.61
HMGB1P23-201ENST00000518743 BTDP43251 543 aa4.97□□□□□ -1.61
HMGB1P23-201ENST00000518743 PDE1AP54750 535 aa4.97□□□□□ -1.61
HMGB1P23-201ENST00000518743 TAS2R50P59544 299 aa4.97□□□□□ -1.61
HMGB1P23-201ENST00000518743 CFHR1Q03591 330 aa4.97□□□□□ -1.61
HMGB1P23-201ENST00000518743 GOLGA8DPQ0D2H9 430 aa4.97□□□□□ -1.61
HMGB1P23-201ENST00000518743 EPS8Q12929 822 aa4.97□□□□□ -1.61
HMGB1P23-201ENST00000518743 PTPRRQ15256 657 aa4.97□□□□□ -1.61
HMGB1P23-201ENST00000518743 TBCEQ15813 527 aaPredicted RBP4.97□□□□□ -1.61
HMGB1P23-201ENST00000518743 ZNF124Q15973 351 aa4.97□□□□□ -1.61
HMGB1P23-201ENST00000518743 PTGISQ16647 500 aa4.97□□□□□ -1.61
HMGB1P23-201ENST00000518743 CCDC57Q2TAC2 916 aa4.97□□□□□ -1.61
HMGB1P23-201ENST00000518743 SLC22A25Q6T423 547 aa4.97□□□□□ -1.61
HMGB1P23-201ENST00000518743 PARS2Q7L3T8 475 aaKnown RBP4.97□□□□□ -1.61
HMGB1P23-201ENST00000518743 PXKQ7Z7A4 578 aa4.97□□□□□ -1.61
HMGB1P23-201ENST00000518743 DZIP1Q86YF9 867 aaKnown RBP4.97□□□□□ -1.61
HMGB1P23-201ENST00000518743 SFTPA1Q8IWL2 248 aa4.97□□□□□ -1.61
HMGB1P23-201ENST00000518743 CPEB3Q8NE35 698 aaKnown RBP4.97□□□□□ -1.61
HMGB1P23-201ENST00000518743 VN1R2Q8NFZ6 395 aa4.97□□□□□ -1.61
HMGB1P23-201ENST00000518743 NACC2Q96BF6 587 aa4.97□□□□□ -1.61
HMGB1P23-201ENST00000518743 R3HDM4Q96D70 268 aa4.97□□□□□ -1.61
HMGB1P23-201ENST00000518743 KIF1BPQ96EK5 621 aa4.97□□□□□ -1.61
HMGB1P23-201ENST00000518743 MYEOVQ96EZ4 313 aa4.97□□□□□ -1.61
HMGB1P23-201ENST00000518743 MCRS1Q96EZ8 462 aa4.97□□□□□ -1.61
HMGB1P23-201ENST00000518743 PBKQ96KB5 322 aa4.97□□□□□ -1.61
HMGB1P23-201ENST00000518743 C12orf42Q96LP6 360 aa4.97□□□□□ -1.61
HMGB1P23-201ENST00000518743 CFAP53Q96M91 514 aa4.97□□□□□ -1.61
HMGB1P23-201ENST00000518743 NPLQ9BXD5 320 aaPredicted RBP4.97□□□□□ -1.61
HMGB1P23-201ENST00000518743 S1PR5Q9H228 398 aa4.97□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms