RNA–Protein interactions for RNA: ENST00000461507.5

FDPS-204, Transcript of farnesyl diphosphate synthase, human

TSL 2

Gene FDPS, Length 1,022 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FDPS-204	ENST00000461507	PEX26	Q7Z412	305 aa		12.82	□□□□□ -0.36
FDPS-204	ENST00000461507	SRL	Q86TD4	932 aa		12.82	□□□□□ -0.36
FDPS-204	ENST00000461507	TTC7B	Q86TV6	843 aa		12.82	□□□□□ -0.36
FDPS-204	ENST00000461507	PQLC3	Q8N755	202 aa		12.82	□□□□□ -0.36
FDPS-204	ENST00000461507	FAM71B	Q8TC56	605 aa		12.82	□□□□□ -0.36
FDPS-204	ENST00000461507	NXPE2	Q96DL1	559 aa		12.82	□□□□□ -0.36
FDPS-204	ENST00000461507	RBM41	Q96IZ5	413 aa	Known RBP	12.82	□□□□□ -0.36
FDPS-204	ENST00000461507	CALR3	Q96L12	384 aa	Known RBP	12.82	□□□□□ -0.36
FDPS-204	ENST00000461507	BMF	Q96LC9	184 aa		12.82	□□□□□ -0.36
FDPS-204	ENST00000461507	ZNF599	Q96NL3	588 aa		12.82	□□□□□ -0.36
FDPS-204	ENST00000461507	LENG8	Q96PV6	779 aa	Predicted RBP	12.82	□□□□□ -0.36
FDPS-204	ENST00000461507	TSGA10	Q9BZW7	698 aa		12.82	□□□□□ -0.36
FDPS-204	ENST00000461507	ATP13A3	Q9H7F0	1226 aa		12.82	□□□□□ -0.36
FDPS-204	ENST00000461507	HAUS2	Q9NVX0	235 aa		12.82	□□□□□ -0.36
FDPS-204	ENST00000461507	AMFR	Q9UKV5	643 aa		12.82	□□□□□ -0.36
FDPS-204	ENST00000461507	ITM2B	Q9Y287	266 aa		12.82	□□□□□ -0.36
FDPS-204	ENST00000461507	RAX	Q9Y2V3	346 aa		12.82	□□□□□ -0.36
FDPS-204	ENST00000461507	LRRK1	Q38SD2	2015 aa		12.82	□□□□□ -0.36
FDPS-204	ENST00000461507	CELSR3	Q9NYQ7	3312 aa		12.81	□□□□□ -0.36
FDPS-204	ENST00000461507		A0A087WV48	116 aa		12.81	□□□□□ -0.36
FDPS-204	ENST00000461507	GRID2IP	A4D2P6	1211 aa		12.81	□□□□□ -0.36
FDPS-204	ENST00000461507	BTNL10	A8MVZ5	291 aa		12.81	□□□□□ -0.36
FDPS-204	ENST00000461507	PPP1R12A	O14974	1030 aa	Predicted RBP	12.81	□□□□□ -0.36
FDPS-204	ENST00000461507	AREL1	O15033	823 aa		12.81	□□□□□ -0.36
FDPS-204	ENST00000461507	PJA2	O43164	708 aa		12.81	□□□□□ -0.36
FDPS-204	ENST00000461507	SIGLEC6	O43699	453 aa		12.81	□□□□□ -0.36
FDPS-204	ENST00000461507	KRT86	O43790	486 aa		12.81	□□□□□ -0.36
FDPS-204	ENST00000461507	MAFK	O60675	156 aa		12.81	□□□□□ -0.36
FDPS-204	ENST00000461507	CCDC175	P0C221	793 aa		12.81	□□□□□ -0.36
FDPS-204	ENST00000461507	CTNNA2	P26232	953 aa		12.81	□□□□□ -0.36
FDPS-204	ENST00000461507	CETN2	P41208	172 aa		12.81	□□□□□ -0.36
FDPS-204	ENST00000461507	CYP4F3	Q08477	520 aa		12.81	□□□□□ -0.36
FDPS-204	ENST00000461507	GALNT2	Q10471	571 aa		12.81	□□□□□ -0.36
FDPS-204	ENST00000461507	TFDP2	Q14188	446 aa		12.81	□□□□□ -0.36
FDPS-204	ENST00000461507	GRM3	Q14832	879 aa		12.81	□□□□□ -0.36
FDPS-204	ENST00000461507	CCDC157	Q569K6	752 aa		12.81	□□□□□ -0.36
FDPS-204	ENST00000461507	SPOCD1	Q6ZMY3	1216 aa		12.81	□□□□□ -0.36
FDPS-204	ENST00000461507	B4GALNT4	Q76KP1	1039 aa		12.81	□□□□□ -0.36
FDPS-204	ENST00000461507	CAMK1D	Q8IU85	385 aa		12.81	□□□□□ -0.36
FDPS-204	ENST00000461507	LRRC8A	Q8IWT6	810 aa		12.81	□□□□□ -0.36
FDPS-204	ENST00000461507	SYCE1	Q8N0S2	351 aa		12.81	□□□□□ -0.36
FDPS-204	ENST00000461507	KRT35	Q92764	455 aa		12.81	□□□□□ -0.36
FDPS-204	ENST00000461507	FAF2	Q96CS3	445 aa		12.81	□□□□□ -0.36
FDPS-204	ENST00000461507	FEM1C	Q96JP0	617 aa		12.81	□□□□□ -0.36
FDPS-204	ENST00000461507	HEMGN	Q9BXL5	484 aa		12.81	□□□□□ -0.36
FDPS-204	ENST00000461507	SLC17A9	Q9BYT1	436 aa		12.81	□□□□□ -0.36
FDPS-204	ENST00000461507	NRSN2	Q9GZP1	204 aa		12.81	□□□□□ -0.36
FDPS-204	ENST00000461507	LZTFL1	Q9NQ48	299 aa		12.81	□□□□□ -0.36
FDPS-204	ENST00000461507	DTL	Q9NZJ0	730 aa		12.81	□□□□□ -0.36
FDPS-204	ENST00000461507	PACSIN2	Q9UNF0	486 aa	Predicted RBP	12.81	□□□□□ -0.36
FDPS-204	ENST00000461507	IGSF10	Q6WRI0	2623 aa		12.81	□□□□□ -0.36
FDPS-204	ENST00000461507	PTPRQ	Q9UMZ3	2332 aa		12.8	□□□□□ -0.36
FDPS-204	ENST00000461507	LRP4	O75096	1905 aa		12.8	□□□□□ -0.36
FDPS-204	ENST00000461507	SPTY2D1-AS1	A0A0U1RR47	76 aa		12.8	□□□□□ -0.36
FDPS-204	ENST00000461507	POM121B	A6NF01	834 aa		12.8	□□□□□ -0.36
FDPS-204	ENST00000461507	C3orf70	A6NLC5	250 aa	Predicted RBP	12.8	□□□□□ -0.36
FDPS-204	ENST00000461507	MUSK	O15146	869 aa		12.8	□□□□□ -0.36
FDPS-204	ENST00000461507	RAD51B	O15315	384 aa		12.8	□□□□□ -0.36
FDPS-204	ENST00000461507	LZTS3	O60299	673 aa	Predicted RBP	12.8	□□□□□ -0.36
FDPS-204	ENST00000461507	CST8	O60676	142 aa		12.8	□□□□□ -0.36
FDPS-204	ENST00000461507	PRKCG	P05129	697 aa		12.8	□□□□□ -0.36
FDPS-204	ENST00000461507	NME1	P15531	152 aa	Known RBP	12.8	□□□□□ -0.36
FDPS-204	ENST00000461507	HSPA9	P38646	679 aa	Known RBP	12.8	□□□□□ -0.36
FDPS-204	ENST00000461507	RABIF	P47224	123 aa		12.8	□□□□□ -0.36
FDPS-204	ENST00000461507	CLDN6	P56747	220 aa		12.8	□□□□□ -0.36
FDPS-204	ENST00000461507	CLDN2	P57739	230 aa		12.8	□□□□□ -0.36
FDPS-204	ENST00000461507	PFN3	P60673	137 aa		12.8	□□□□□ -0.36
FDPS-204	ENST00000461507	FZD2	Q14332	565 aa		12.8	□□□□□ -0.36
FDPS-204	ENST00000461507	RTP5	Q14D33	572 aa		12.8	□□□□□ -0.36
FDPS-204	ENST00000461507	TFDP3	Q5H9I0	405 aa		12.8	□□□□□ -0.36
FDPS-204	ENST00000461507		Q6ZSR6	202 aa		12.8	□□□□□ -0.36
FDPS-204	ENST00000461507	LRRC49	Q8IUZ0	686 aa		12.8	□□□□□ -0.36
FDPS-204	ENST00000461507	CCDC13	Q8IYE1	715 aa		12.8	□□□□□ -0.36
FDPS-204	ENST00000461507	KATNAL2	Q8IYT4	538 aa		12.8	□□□□□ -0.36
FDPS-204	ENST00000461507	RCOR2	Q8IZ40	523 aa		12.8	□□□□□ -0.36
FDPS-204	ENST00000461507	UBL4B	Q8N7F7	174 aa		12.8	□□□□□ -0.36
FDPS-204	ENST00000461507	PLD5	Q8N7P1	536 aa		12.8	□□□□□ -0.36
FDPS-204	ENST00000461507	DCBLD1	Q8N8Z6	715 aa		12.8	□□□□□ -0.36
FDPS-204	ENST00000461507	FAM181A	Q8N9Y4	354 aa		12.8	□□□□□ -0.36
FDPS-204	ENST00000461507	CXorf40A	Q8TE69	158 aa		12.8	□□□□□ -0.36
FDPS-204	ENST00000461507	LGMN	Q99538	433 aa		12.8	□□□□□ -0.36
FDPS-204	ENST00000461507	WRAP53	Q9BUR4	548 aa	Known RBP	12.8	□□□□□ -0.36
FDPS-204	ENST00000461507	SUV39H2	Q9H5I1	410 aa		12.8	□□□□□ -0.36
FDPS-204	ENST00000461507	USP29	Q9HBJ7	922 aa		12.8	□□□□□ -0.36
FDPS-204	ENST00000461507	RBM22	Q9NW64	420 aa	Known RBP eCLIP	12.8	□□□□□ -0.36
FDPS-204	ENST00000461507	UCKL1	Q9NWZ5	548 aa		12.8	□□□□□ -0.36
FDPS-204	ENST00000461507	NLGN3	Q9NZ94	848 aa		12.8	□□□□□ -0.36
FDPS-204	ENST00000461507	DKK3	Q9UBP4	350 aa		12.8	□□□□□ -0.36
FDPS-204	ENST00000461507	ADGRG1	Q9Y653	693 aa		12.8	□□□□□ -0.36
FDPS-204	ENST00000461507	ANKRD36	A6QL64	1941 aa		12.8	□□□□□ -0.36
FDPS-204	ENST00000461507	SHROOM3	Q8TF72	1996 aa		12.8	□□□□□ -0.36
FDPS-204	ENST00000461507	LY6G6E	A0A0G2JKS1	128 aa		12.79	□□□□□ -0.36
FDPS-204	ENST00000461507	TSPAN11	A1L157	253 aa		12.79	□□□□□ -0.36
FDPS-204	ENST00000461507	CCDC66	A2RUB6	948 aa		12.79	□□□□□ -0.36
FDPS-204	ENST00000461507	KCNK1	O00180	336 aa		12.79	□□□□□ -0.36
FDPS-204	ENST00000461507	RIOK3	O14730	519 aa	Known RBP	12.79	□□□□□ -0.36
FDPS-204	ENST00000461507	CSF2	P04141	144 aa		12.79	□□□□□ -0.36
FDPS-204	ENST00000461507	CKMT1A	P12532	417 aa		12.79	□□□□□ -0.36
FDPS-204	ENST00000461507	JUP	P14923	745 aa		12.79	□□□□□ -0.36
FDPS-204	ENST00000461507	CTNNA1	P35221	906 aa	Known RBP	12.79	□□□□□ -0.36

Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms