RNA–Protein interactions for RNA: ENST00000460264.5

COL5A1-203, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 3

Gene COL5A1, Length 913 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-203ENST00000460264 TBATAQ96M53 351 aa19.02■□□□□ 0.64
COL5A1-203ENST00000460264 LRRC61Q9BV99 259 aa19.02■□□□□ 0.64
COL5A1-203ENST00000460264 NOD2Q9HC29 1040 aa19.02■□□□□ 0.64
COL5A1-203ENST00000460264 SCUBE2Q9NQ36 999 aa19.02■□□□□ 0.64
COL5A1-203ENST00000460264 SPTLC3Q9NUV7 552 aa19.02■□□□□ 0.64
COL5A1-203ENST00000460264 SPASTQ9UBP0 616 aa19.02■□□□□ 0.64
COL5A1-203ENST00000460264 PCDHGC4Q9Y5F7 938 aa19.02■□□□□ 0.64
COL5A1-203ENST00000460264 ITPR1Q14643 2758 aa19.02■□□□□ 0.63
COL5A1-203ENST00000460264 GCATO75600 419 aa19.01■□□□□ 0.63
COL5A1-203ENST00000460264 RECQL5O94762 991 aaPredicted RBP19.01■□□□□ 0.63
COL5A1-203ENST00000460264 PCCBP05166 539 aa19.01■□□□□ 0.63
COL5A1-203ENST00000460264 KRT7P08729 469 aa19.01■□□□□ 0.63
COL5A1-203ENST00000460264 GARSP41250 739 aaKnown RBP19.01■□□□□ 0.63
COL5A1-203ENST00000460264 MAXP61244 160 aa19.01■□□□□ 0.63
COL5A1-203ENST00000460264 GALNT2Q10471 571 aa19.01■□□□□ 0.63
COL5A1-203ENST00000460264 INPP5AQ14642 412 aa19.01■□□□□ 0.63
COL5A1-203ENST00000460264 NFATC4Q14934 902 aa19.01■□□□□ 0.63
COL5A1-203ENST00000460264 PDK2Q15119 407 aa19.01■□□□□ 0.63
COL5A1-203ENST00000460264 DEFB133Q30KQ1 61 aa19.01■□□□□ 0.63
COL5A1-203ENST00000460264 PRRT3Q5FWE3 981 aa19.01■□□□□ 0.63
COL5A1-203ENST00000460264 LIPIQ6XZB0 460 aa19.01■□□□□ 0.63
COL5A1-203ENST00000460264 SLC13A1Q9BZW2 595 aa19.01■□□□□ 0.63
COL5A1-203ENST00000460264 NHEJ1Q9H9Q4 299 aaPredicted RBP19.01■□□□□ 0.63
COL5A1-203ENST00000460264 USP29Q9HBJ7 922 aa19.01■□□□□ 0.63
COL5A1-203ENST00000460264 OR1A2Q9Y585 309 aa19.01■□□□□ 0.63
COL5A1-203ENST00000460264 FAM208BQ5VWN6 2430 aa19.01■□□□□ 0.63
COL5A1-203ENST00000460264 ASXL3Q9C0F0 2248 aa19■□□□□ 0.63
COL5A1-203ENST00000460264 A0A1W2PQ67 120 aa19■□□□□ 0.63
COL5A1-203ENST00000460264 TMEM110-MUSTN1A8MSY1 372 aa19■□□□□ 0.63
COL5A1-203ENST00000460264 TPP1O14773 563 aa19■□□□□ 0.63
COL5A1-203ENST00000460264 GM2AP17900 193 aa19■□□□□ 0.63
COL5A1-203ENST00000460264 E2F1Q01094 437 aa19■□□□□ 0.63
COL5A1-203ENST00000460264 PPARDQ03181 441 aa19■□□□□ 0.63
COL5A1-203ENST00000460264 CYP4F3Q08477 520 aa19■□□□□ 0.63
COL5A1-203ENST00000460264 TRAF2Q12933 501 aa19■□□□□ 0.63
COL5A1-203ENST00000460264 TARDBPQ13148 414 aaKnown RBP eCLIP19■□□□□ 0.63
COL5A1-203ENST00000460264 MTM1Q13496 603 aa19■□□□□ 0.63
COL5A1-203ENST00000460264 RALGPS1Q5JS13 557 aa19■□□□□ 0.63
COL5A1-203ENST00000460264 FAXCQ5TGI0 409 aa19■□□□□ 0.63
COL5A1-203ENST00000460264 MAP7D3Q8IWC1 876 aa19■□□□□ 0.63
COL5A1-203ENST00000460264 TEX26Q8N6G2 289 aa19■□□□□ 0.63
COL5A1-203ENST00000460264 PLA2G15Q8NCC3 412 aa19■□□□□ 0.63
COL5A1-203ENST00000460264 SLC35G2Q8TBE7 412 aa19■□□□□ 0.63
COL5A1-203ENST00000460264 PDCD6IPQ8WUM4 868 aaKnown RBP19■□□□□ 0.63
COL5A1-203ENST00000460264 NXPE2Q96DL1 559 aa19■□□□□ 0.63
COL5A1-203ENST00000460264 CCDC42Q96M95 316 aa19■□□□□ 0.63
COL5A1-203ENST00000460264 APOOQ9BUR5 198 aa19■□□□□ 0.63
COL5A1-203ENST00000460264 NT5MQ9NPB1 228 aa19■□□□□ 0.63
COL5A1-203ENST00000460264 EVA1BQ9NVM1 165 aa19■□□□□ 0.63
COL5A1-203ENST00000460264 B4GALT6Q9UBX8 382 aa19■□□□□ 0.63
COL5A1-203ENST00000460264 COL27A1Q8IZC6 1860 aaPredicted RBP19■□□□□ 0.63
COL5A1-203ENST00000460264 ZFYVE26Q68DK2 2539 aa18.99■□□□□ 0.63
COL5A1-203ENST00000460264 A8MX80 341 aa18.99■□□□□ 0.63
COL5A1-203ENST00000460264 LMO7DNF2Z398 122 aa18.99■□□□□ 0.63
COL5A1-203ENST00000460264 MAP3K6O95382 1288 aa18.99■□□□□ 0.63
COL5A1-203ENST00000460264 CPP00450 1065 aa18.99■□□□□ 0.63
COL5A1-203ENST00000460264 GP1BAP07359 652 aa18.99■□□□□ 0.63
COL5A1-203ENST00000460264 DUSP3P51452 185 aaPredicted RBP18.99■□□□□ 0.63
COL5A1-203ENST00000460264 TBX2Q13207 712 aaPredicted RBP18.99■□□□□ 0.63
COL5A1-203ENST00000460264 C1orf61Q13536 156 aa18.99■□□□□ 0.63
COL5A1-203ENST00000460264 MESDQ14696 234 aa18.99■□□□□ 0.63
COL5A1-203ENST00000460264 ALG11Q2TAA5 492 aa18.99■□□□□ 0.63
COL5A1-203ENST00000460264 CNGA4Q8IV77 575 aa18.99■□□□□ 0.63
COL5A1-203ENST00000460264 CACTIN-AS1Q8N1I8 211 aa18.99■□□□□ 0.63
COL5A1-203ENST00000460264 PQLC3Q8N755 202 aa18.99■□□□□ 0.63
COL5A1-203ENST00000460264 DCBLD1Q8N8Z6 715 aa18.99■□□□□ 0.63
COL5A1-203ENST00000460264 MAML1Q92585 1016 aa18.99■□□□□ 0.63
COL5A1-203ENST00000460264 IL12RB2Q99665 862 aa18.99■□□□□ 0.63
COL5A1-203ENST00000460264 CLPBQ9H078 707 aa18.99■□□□□ 0.63
COL5A1-203ENST00000460264 NCKIPSDQ9NZQ3 722 aa18.99■□□□□ 0.63
COL5A1-203ENST00000460264 SALL4Q9UJQ4 1053 aa18.99■□□□□ 0.63
COL5A1-203ENST00000460264 CLCA2Q9UQC9 943 aa18.99■□□□□ 0.63
COL5A1-203ENST00000460264 ZFHX4Q86UP3 3567 aa18.99■□□□□ 0.63
COL5A1-203ENST00000460264 RP1P56715 2156 aa18.98■□□□□ 0.63
COL5A1-203ENST00000460264 OPA1O60313 960 aa18.98■□□□□ 0.63
COL5A1-203ENST00000460264 MTA2O94776 668 aa18.98■□□□□ 0.63
COL5A1-203ENST00000460264 PGLSO95336 258 aa18.98■□□□□ 0.63
COL5A1-203ENST00000460264 TSHRP16473 764 aa18.98■□□□□ 0.63
COL5A1-203ENST00000460264 HTR1BP28222 390 aa18.98■□□□□ 0.63
COL5A1-203ENST00000460264 BLKP51451 505 aa18.98■□□□□ 0.63
COL5A1-203ENST00000460264 HK3P52790 923 aa18.98■□□□□ 0.63
COL5A1-203ENST00000460264 GBE1Q04446 702 aa18.98■□□□□ 0.63
COL5A1-203ENST00000460264 CNGA3Q16281 694 aa18.98■□□□□ 0.63
COL5A1-203ENST00000460264 ALG1LQ6GMV1 187 aa18.98■□□□□ 0.63
COL5A1-203ENST00000460264 TIGD7Q6NT04 549 aaPredicted RBP18.98■□□□□ 0.63
COL5A1-203ENST00000460264 SARM1Q6SZW1 724 aa18.98■□□□□ 0.63
COL5A1-203ENST00000460264 NYAP1Q6ZVC0 841 aa18.98■□□□□ 0.63
COL5A1-203ENST00000460264 HID1Q8IV36 788 aa18.98■□□□□ 0.63
COL5A1-203ENST00000460264 IFI44Q8TCB0 444 aa18.98■□□□□ 0.63
COL5A1-203ENST00000460264 RAPGEF5Q92565 580 aa18.98■□□□□ 0.63
COL5A1-203ENST00000460264 FATE1Q969F0 183 aa18.98■□□□□ 0.63
COL5A1-203ENST00000460264 TSACCQ96A04 125 aaPredicted RBP18.98■□□□□ 0.63
COL5A1-203ENST00000460264 COQ10AQ96MF6 247 aa18.98■□□□□ 0.63
COL5A1-203ENST00000460264 SEMA3CQ99985 751 aa18.98■□□□□ 0.63
COL5A1-203ENST00000460264 BOCQ9BWV1 1114 aa18.98■□□□□ 0.63
COL5A1-203ENST00000460264 AKR1B15C9JRZ8 316 aaPredicted RBP18.97■□□□□ 0.63
COL5A1-203ENST00000460264 HEXIM1O94992 359 aaKnown RBP18.97■□□□□ 0.63
COL5A1-203ENST00000460264 RASGRP1O95267 797 aa18.97■□□□□ 0.63
COL5A1-203ENST00000460264 ANXA6P08133 673 aa18.97■□□□□ 0.63
COL5A1-203ENST00000460264 CELA2BP08218 269 aaPredicted RBP18.97■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms