RNA–Protein interactions for RNA: ENST00000450940.5

USP40-207, Transcript of ubiquitin specific peptidase 40, humanhuman

TSL 3

Gene USP40, Length 670 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP40-207ENST00000450940 INPP5AQ14642 412 aa19.49■□□□□ 0.71
USP40-207ENST00000450940 MARC1Q5VT66 337 aa19.49■□□□□ 0.71
USP40-207ENST00000450940 RBFAQ8N0V3 343 aa19.49■□□□□ 0.71
USP40-207ENST00000450940 CBARPQ8N350 705 aaPredicted RBP19.49■□□□□ 0.71
USP40-207ENST00000450940 BBS5Q8N3I7 341 aa19.49■□□□□ 0.71
USP40-207ENST00000450940 LMX1AQ8TE12 382 aa19.49■□□□□ 0.71
USP40-207ENST00000450940 FATE1Q969F0 183 aa19.49■□□□□ 0.71
USP40-207ENST00000450940 FAF2Q96CS3 445 aa19.49■□□□□ 0.71
USP40-207ENST00000450940 CHP1Q99653 195 aa19.49■□□□□ 0.71
USP40-207ENST00000450940 ZNF670Q9BS34 389 aa19.49■□□□□ 0.71
USP40-207ENST00000450940 APOOQ9BUR5 198 aa19.49■□□□□ 0.71
USP40-207ENST00000450940 NOD2Q9HC29 1040 aa19.49■□□□□ 0.71
USP40-207ENST00000450940 EVA1BQ9NVM1 165 aa19.49■□□□□ 0.71
USP40-207ENST00000450940 APOBEC3BQ9UH17 382 aaKnown RBP19.49■□□□□ 0.71
USP40-207ENST00000450940 PCDHGC4Q9Y5F7 938 aa19.49■□□□□ 0.71
USP40-207ENST00000450940 ITPR1Q14643 2758 aa19.49■□□□□ 0.71
USP40-207ENST00000450940 TTC24A2A3L6 582 aaPredicted RBP19.48■□□□□ 0.71
USP40-207ENST00000450940 MFAP3LO75121 409 aa19.48■□□□□ 0.71
USP40-207ENST00000450940 RECQL5O94762 991 aaPredicted RBP19.48■□□□□ 0.71
USP40-207ENST00000450940 KRT7P08729 469 aa19.48■□□□□ 0.71
USP40-207ENST00000450940 MMP13P45452 471 aa19.48■□□□□ 0.71
USP40-207ENST00000450940 PPARDQ03181 441 aa19.48■□□□□ 0.71
USP40-207ENST00000450940 NFATC4Q14934 902 aa19.48■□□□□ 0.71
USP40-207ENST00000450940 RTP5Q14D33 572 aa19.48■□□□□ 0.71
USP40-207ENST00000450940 TSR1Q2NL82 804 aaKnown RBP19.48■□□□□ 0.71
USP40-207ENST00000450940 ANKRD20A8PQ5CZ79 823 aa19.48■□□□□ 0.71
USP40-207ENST00000450940 PRRT3Q5FWE3 981 aa19.48■□□□□ 0.71
USP40-207ENST00000450940 CDCP2Q5VXM1 449 aa19.48■□□□□ 0.71
USP40-207ENST00000450940 NCBP2-AS2Q69YL0 99 aa19.48■□□□□ 0.71
USP40-207ENST00000450940 MAP7D3Q8IWC1 876 aa19.48■□□□□ 0.71
USP40-207ENST00000450940 KCTD6Q8NC69 237 aa19.48■□□□□ 0.71
USP40-207ENST00000450940 NSMCE1Q8WV22 266 aa19.48■□□□□ 0.71
USP40-207ENST00000450940 MAML1Q92585 1016 aa19.48■□□□□ 0.71
USP40-207ENST00000450940 TSGA13Q96PP4 275 aa19.48■□□□□ 0.71
USP40-207ENST00000450940 IL12RB2Q99665 862 aa19.48■□□□□ 0.71
USP40-207ENST00000450940 LRRC61Q9BV99 259 aa19.48■□□□□ 0.71
USP40-207ENST00000450940 BOCQ9BWV1 1114 aa19.48■□□□□ 0.71
USP40-207ENST00000450940 SLC13A1Q9BZW2 595 aa19.48■□□□□ 0.71
USP40-207ENST00000450940 NRSN2Q9GZP1 204 aa19.48■□□□□ 0.71
USP40-207ENST00000450940 CLPBQ9H078 707 aa19.48■□□□□ 0.71
USP40-207ENST00000450940 DEF6Q9H4E7 631 aa19.48■□□□□ 0.71
USP40-207ENST00000450940 SCUBE2Q9NQ36 999 aa19.48■□□□□ 0.71
USP40-207ENST00000450940 FAM208BQ5VWN6 2430 aa19.48■□□□□ 0.71
USP40-207ENST00000450940 URB1O60287 2271 aaKnown RBP19.48■□□□□ 0.71
USP40-207ENST00000450940 ZFHX4Q86UP3 3567 aa19.47■□□□□ 0.71
USP40-207ENST00000450940 MFSD11O43934 449 aa19.47■□□□□ 0.71
USP40-207ENST00000450940 AKR1B10O60218 316 aa19.47■□□□□ 0.71
USP40-207ENST00000450940 OPA1O60313 960 aa19.47■□□□□ 0.71
USP40-207ENST00000450940 MTA2O94776 668 aa19.47■□□□□ 0.71
USP40-207ENST00000450940 HOXC4P09017 264 aaPredicted RBP19.47■□□□□ 0.71
USP40-207ENST00000450940 TPM1P09493 284 aa19.47■□□□□ 0.71
USP40-207ENST00000450940 ELFN1P0C7U0 828 aa19.47■□□□□ 0.71
USP40-207ENST00000450940 MYF5P13349 255 aa19.47■□□□□ 0.71
USP40-207ENST00000450940 TRIM23P36406 574 aa19.47■□□□□ 0.71
USP40-207ENST00000450940 GARSP41250 739 aaKnown RBP19.47■□□□□ 0.71
USP40-207ENST00000450940 BLKP51451 505 aa19.47■□□□□ 0.71
USP40-207ENST00000450940 HK3P52790 923 aa19.47■□□□□ 0.71
USP40-207ENST00000450940 TBX2Q13207 712 aaPredicted RBP19.47■□□□□ 0.71
USP40-207ENST00000450940 DEFB133Q30KQ1 61 aa19.47■□□□□ 0.71
USP40-207ENST00000450940 FAXCQ5TGI0 409 aa19.47■□□□□ 0.71
USP40-207ENST00000450940 ALG1LQ6GMV1 187 aa19.47■□□□□ 0.71
USP40-207ENST00000450940 SDR16C5Q8N3Y7 309 aa19.47■□□□□ 0.71
USP40-207ENST00000450940 FSTL5Q8N475 847 aaPredicted RBP19.47■□□□□ 0.71
USP40-207ENST00000450940 NXPE2Q96DL1 559 aa19.47■□□□□ 0.71
USP40-207ENST00000450940 COQ10AQ96MF6 247 aa19.47■□□□□ 0.71
USP40-207ENST00000450940 NHEJ1Q9H9Q4 299 aaPredicted RBP19.47■□□□□ 0.71
USP40-207ENST00000450940 B4GALT6Q9UBX8 382 aa19.47■□□□□ 0.71
USP40-207ENST00000450940 PHTF1Q9UMS5 762 aa19.47■□□□□ 0.71
USP40-207ENST00000450940 CLCA2Q9UQC9 943 aa19.47■□□□□ 0.71
USP40-207ENST00000450940 PPIL1Q9Y3C6 166 aa19.47■□□□□ 0.71
USP40-207ENST00000450940 COL27A1Q8IZC6 1860 aaPredicted RBP19.47■□□□□ 0.71
USP40-207ENST00000450940 NBEAQ8NFP9 2946 aa19.47■□□□□ 0.71
USP40-207ENST00000450940 ADAMTS20P59510 1910 aa19.47■□□□□ 0.71
USP40-207ENST00000450940 RP1P56715 2156 aa19.46■□□□□ 0.71
USP40-207ENST00000450940 EME2A4GXA9 379 aaPredicted RBP19.46■□□□□ 0.71
USP40-207ENST00000450940 YY2O15391 372 aa19.46■□□□□ 0.71
USP40-207ENST00000450940 MT-CO3P00414 261 aa19.46■□□□□ 0.71
USP40-207ENST00000450940 TSHRP16473 764 aa19.46■□□□□ 0.71
USP40-207ENST00000450940 CCNCP24863 283 aa19.46■□□□□ 0.71
USP40-207ENST00000450940 HTR1BP28222 390 aa19.46■□□□□ 0.71
USP40-207ENST00000450940 ADKP55263 362 aaKnown RBP19.46■□□□□ 0.71
USP40-207ENST00000450940 KIAA1024LP59773 190 aa19.46■□□□□ 0.71
USP40-207ENST00000450940 MAXP61244 160 aa19.46■□□□□ 0.71
USP40-207ENST00000450940 TRAF2Q12933 501 aa19.46■□□□□ 0.71
USP40-207ENST00000450940 ALG11Q2TAA5 492 aa19.46■□□□□ 0.71
USP40-207ENST00000450940 LVRNQ6Q4G3 990 aa19.46■□□□□ 0.71
USP40-207ENST00000450940 PQLC3Q8N755 202 aa19.46■□□□□ 0.71
USP40-207ENST00000450940 PLA2G15Q8NCC3 412 aa19.46■□□□□ 0.71
USP40-207ENST00000450940 RNF214Q8ND24 703 aa19.46■□□□□ 0.71
USP40-207ENST00000450940 ATL2Q8NHH9 583 aa19.46■□□□□ 0.71
USP40-207ENST00000450940 SLC35G2Q8TBE7 412 aa19.46■□□□□ 0.71
USP40-207ENST00000450940 CCDC42Q96M95 316 aa19.46■□□□□ 0.71
USP40-207ENST00000450940 KCTD5Q9NXV2 234 aa19.46■□□□□ 0.71
USP40-207ENST00000450940 AMACRQ9UHK6 382 aa19.46■□□□□ 0.71
USP40-207ENST00000450940 OR1A2Q9Y585 309 aa19.46■□□□□ 0.71
USP40-207ENST00000450940 ZNF487B1APH4 448 aa19.45■□□□□ 0.7
USP40-207ENST00000450940 MATN3O15232 486 aa19.45■□□□□ 0.7
USP40-207ENST00000450940 RASGRP1O95267 797 aa19.45■□□□□ 0.7
USP40-207ENST00000450940 PGLSO95336 258 aa19.45■□□□□ 0.7
USP40-207ENST00000450940 CPP00450 1065 aa19.45■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms