RNA–Protein interactions for RNA: ENST00000446833.1

SDCCAG3-206, Transcript of Serologically defined colon cancer antigen 3, humanhuman

TSL 3

Gene SDCCAG3, Length 459 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCCAG3-206ENST00000446833 CASC3O15234 703 aaKnown RBP17.29■□□□□ 0.36
SDCCAG3-206ENST00000446833 PALMO75781 387 aa17.29■□□□□ 0.36
SDCCAG3-206ENST00000446833 PCCBP05166 539 aa17.29■□□□□ 0.36
SDCCAG3-206ENST00000446833 RPLP0P05388 317 aaKnown RBP17.29■□□□□ 0.36
SDCCAG3-206ENST00000446833 PNLIPP16233 465 aa17.29■□□□□ 0.36
SDCCAG3-206ENST00000446833 FERP16591 822 aa17.29■□□□□ 0.36
SDCCAG3-206ENST00000446833 KELP23276 732 aa17.29■□□□□ 0.36
SDCCAG3-206ENST00000446833 CCKBRP32239 447 aa17.29■□□□□ 0.36
SDCCAG3-206ENST00000446833 PAPOLAP51003 745 aaKnown RBP17.29■□□□□ 0.36
SDCCAG3-206ENST00000446833 INHBCP55103 352 aa17.29■□□□□ 0.36
SDCCAG3-206ENST00000446833 KIAA1024LP59773 190 aa17.29■□□□□ 0.36
SDCCAG3-206ENST00000446833 CCL7P80098 99 aa17.29■□□□□ 0.36
SDCCAG3-206ENST00000446833 MYL5Q02045 173 aa17.29■□□□□ 0.36
SDCCAG3-206ENST00000446833 RFTN1Q14699 578 aaPredicted RBP17.29■□□□□ 0.36
SDCCAG3-206ENST00000446833 ERMARDQ5T6L9 678 aa17.29■□□□□ 0.36
SDCCAG3-206ENST00000446833 OGFOD3Q6PK18 319 aa17.29■□□□□ 0.36
SDCCAG3-206ENST00000446833 RAB11FIP2Q7L804 512 aa17.29■□□□□ 0.36
SDCCAG3-206ENST00000446833 GPR156Q8NFN8 814 aa17.29■□□□□ 0.36
SDCCAG3-206ENST00000446833 ECHDC3Q96DC8 303 aa17.29■□□□□ 0.36
SDCCAG3-206ENST00000446833 CELF6Q96J87 481 aaKnown RBP17.29■□□□□ 0.36
SDCCAG3-206ENST00000446833 CCNL2Q96S94 520 aaPredicted RBP17.29■□□□□ 0.36
SDCCAG3-206ENST00000446833 SLC39A8Q9C0K1 460 aa17.29■□□□□ 0.36
SDCCAG3-206ENST00000446833 LRRN3Q9H3W5 708 aa17.29■□□□□ 0.36
SDCCAG3-206ENST00000446833 EPB41L5Q9HCM4 733 aa17.29■□□□□ 0.36
SDCCAG3-206ENST00000446833 LMBRD1Q9NUN5 540 aa17.29■□□□□ 0.36
SDCCAG3-206ENST00000446833 PARVAQ9NVD7 372 aa17.29■□□□□ 0.36
SDCCAG3-206ENST00000446833 ANO10Q9NW15 660 aa17.29■□□□□ 0.36
SDCCAG3-206ENST00000446833 APPL1Q9UKG1 709 aa17.29■□□□□ 0.36
SDCCAG3-206ENST00000446833 ACSL6Q9UKU0 697 aa17.29■□□□□ 0.36
SDCCAG3-206ENST00000446833 AP4E1Q9UPM8 1137 aa17.29■□□□□ 0.36
SDCCAG3-206ENST00000446833 LRRK1Q38SD2 2015 aa17.29■□□□□ 0.36
SDCCAG3-206ENST00000446833 A0A1W2PQM1 296 aa17.28■□□□□ 0.36
SDCCAG3-206ENST00000446833 J3QKU1 62 aa17.28■□□□□ 0.36
SDCCAG3-206ENST00000446833 RECQL5O94762 991 aaPredicted RBP17.28■□□□□ 0.36
SDCCAG3-206ENST00000446833 GLB1P16278 677 aa17.28■□□□□ 0.36
SDCCAG3-206ENST00000446833 CDK11BP21127 795 aaKnown RBP17.28■□□□□ 0.36
SDCCAG3-206ENST00000446833 UGT1A5P35504 534 aa17.28■□□□□ 0.36
SDCCAG3-206ENST00000446833 TRIM23P36406 574 aa17.28■□□□□ 0.36
SDCCAG3-206ENST00000446833 ZNF135P52742 658 aaPredicted RBP17.28■□□□□ 0.36
SDCCAG3-206ENST00000446833 OGDHQ02218 1023 aa17.28■□□□□ 0.36
SDCCAG3-206ENST00000446833 BCL2L1Q07817 233 aa17.28■□□□□ 0.36
SDCCAG3-206ENST00000446833 MAMLD1Q13495 774 aa17.28■□□□□ 0.36
SDCCAG3-206ENST00000446833 AFMIDQ63HM1 303 aa17.28■□□□□ 0.36
SDCCAG3-206ENST00000446833 B3GNT8Q7Z7M8 397 aa17.28■□□□□ 0.36
SDCCAG3-206ENST00000446833 ZSWIM9Q86XI8 627 aa17.28■□□□□ 0.36
SDCCAG3-206ENST00000446833 TSEN2Q8NCE0 465 aaKnown RBP17.28■□□□□ 0.36
SDCCAG3-206ENST00000446833 OR56A4Q8NGH8 313 aa17.28■□□□□ 0.36
SDCCAG3-206ENST00000446833 TMEM159Q96B96 161 aa17.28■□□□□ 0.36
SDCCAG3-206ENST00000446833 MED8Q96G25 268 aa17.28■□□□□ 0.36
SDCCAG3-206ENST00000446833 ATXN7L1Q9ULK2 861 aaPredicted RBP17.28■□□□□ 0.36
SDCCAG3-206ENST00000446833 MYO6Q9UM54 1294 aa17.28■□□□□ 0.36
SDCCAG3-206ENST00000446833 TLN1Q9Y490 2541 aaKnown RBP17.28■□□□□ 0.36
SDCCAG3-206ENST00000446833 MYO18BQ8IUG5 2567 aa17.28■□□□□ 0.36
SDCCAG3-206ENST00000446833 DAPK3O43293 454 aa17.27■□□□□ 0.36
SDCCAG3-206ENST00000446833 ZIC2O95409 532 aaPredicted RBP17.27■□□□□ 0.36
SDCCAG3-206ENST00000446833 ELFN1P0C7U0 828 aa17.27■□□□□ 0.36
SDCCAG3-206ENST00000446833 PSMA2P25787 234 aa17.27■□□□□ 0.36
SDCCAG3-206ENST00000446833 SLC5A2P31639 672 aa17.27■□□□□ 0.36
SDCCAG3-206ENST00000446833 RGRP47804 291 aa17.27■□□□□ 0.36
SDCCAG3-206ENST00000446833 RALGDSQ12967 914 aa17.27■□□□□ 0.36
SDCCAG3-206ENST00000446833 TCEA2Q15560 299 aa17.27■□□□□ 0.36
SDCCAG3-206ENST00000446833 CERCAMQ5T4B2 595 aa17.27■□□□□ 0.36
SDCCAG3-206ENST00000446833 SASS6Q6UVJ0 657 aa17.27■□□□□ 0.36
SDCCAG3-206ENST00000446833 LIPIQ6XZB0 460 aa17.27■□□□□ 0.36
SDCCAG3-206ENST00000446833 RFX8Q6ZV50 586 aa17.27■□□□□ 0.36
SDCCAG3-206ENST00000446833 DPPA4Q7L190 304 aa17.27■□□□□ 0.36
SDCCAG3-206ENST00000446833 IRF2BP2Q7Z5L9 587 aa17.27■□□□□ 0.36
SDCCAG3-206ENST00000446833 CCNJLQ8IV13 435 aa17.27■□□□□ 0.36
SDCCAG3-206ENST00000446833 PSTKQ8IV42 348 aaKnown RBP17.27■□□□□ 0.36
SDCCAG3-206ENST00000446833 PLA2G15Q8NCC3 412 aa17.27■□□□□ 0.36
SDCCAG3-206ENST00000446833 OR1E3Q8WZA6 343 aa17.27■□□□□ 0.36
SDCCAG3-206ENST00000446833 SPOCK2Q92563 424 aa17.27■□□□□ 0.36
SDCCAG3-206ENST00000446833 FUBP1Q96AE4 644 aaKnown RBP17.27■□□□□ 0.36
SDCCAG3-206ENST00000446833 PDXPQ96GD0 296 aa17.27■□□□□ 0.36
SDCCAG3-206ENST00000446833 CINPQ9BW66 212 aaPredicted RBP17.27■□□□□ 0.36
SDCCAG3-206ENST00000446833 DHX35Q9H5Z1 703 aaKnown RBP17.27■□□□□ 0.36
SDCCAG3-206ENST00000446833 LRP4O75096 1905 aa17.26■□□□□ 0.35
SDCCAG3-206ENST00000446833 TMEM202A6NGA9 273 aa17.26■□□□□ 0.35
SDCCAG3-206ENST00000446833 B8ZZF3 427 aa17.26■□□□□ 0.35
SDCCAG3-206ENST00000446833 PDE2AO00408 941 aaPredicted RBP17.26■□□□□ 0.35
SDCCAG3-206ENST00000446833 TRAFD1O14545 582 aaPredicted RBP17.26■□□□□ 0.35
SDCCAG3-206ENST00000446833 NVLO15381 856 aaKnown RBP17.26■□□□□ 0.35
SDCCAG3-206ENST00000446833 RNF8O76064 485 aa17.26■□□□□ 0.35
SDCCAG3-206ENST00000446833 PRKCGP05129 697 aa17.26■□□□□ 0.35
SDCCAG3-206ENST00000446833 TNFAIP3P21580 790 aa17.26■□□□□ 0.35
SDCCAG3-206ENST00000446833 HCAR3P49019 387 aa17.26■□□□□ 0.35
SDCCAG3-206ENST00000446833 RENBPP51606 427 aa17.26■□□□□ 0.35
SDCCAG3-206ENST00000446833 AP1S1P61966 158 aa17.26■□□□□ 0.35
SDCCAG3-206ENST00000446833 IL10RBQ08334 325 aa17.26■□□□□ 0.35
SDCCAG3-206ENST00000446833 LY6DQ14210 128 aa17.26■□□□□ 0.35
SDCCAG3-206ENST00000446833 ZSCAN23Q3MJ62 389 aa17.26■□□□□ 0.35
SDCCAG3-206ENST00000446833 PLEKHA7Q6IQ23 1121 aa17.26■□□□□ 0.35
SDCCAG3-206ENST00000446833 TAF8Q7Z7C8 310 aa17.26■□□□□ 0.35
SDCCAG3-206ENST00000446833 ARHGAP12Q8IWW6 846 aa17.26■□□□□ 0.35
SDCCAG3-206ENST00000446833 LZTR1Q8N653 840 aa17.26■□□□□ 0.35
SDCCAG3-206ENST00000446833 FAM46DQ8NEK8 389 aa17.26■□□□□ 0.35
SDCCAG3-206ENST00000446833 FNIP1Q8TF40 1166 aa17.26■□□□□ 0.35
SDCCAG3-206ENST00000446833 SYT11Q9BT88 431 aa17.26■□□□□ 0.35
SDCCAG3-206ENST00000446833 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP17.26■□□□□ 0.35
SDCCAG3-206ENST00000446833 FOXP3Q9BZS1 431 aa17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms