RNA–Protein interactions for RNA: ENST00000444511.6

VSX1-206, Transcript of visual system homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene VSX1, Length 1,197 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-206ENST00000444511 ARL10Q8N8L6 244 aa21.16■□□□□ 0.98
VSX1-206ENST00000444511 PCDH19Q8TAB3 1148 aa21.16■□□□□ 0.98
VSX1-206ENST00000444511 ECHDC3Q96DC8 303 aa21.16■□□□□ 0.98
VSX1-206ENST00000444511 ATXN7L3BQ96GX2 97 aa21.16■□□□□ 0.98
VSX1-206ENST00000444511 WDR92Q96MX6 357 aa21.16■□□□□ 0.98
VSX1-206ENST00000444511 CCDC3Q9BQI4 270 aa21.16■□□□□ 0.98
VSX1-206ENST00000444511 SYNDIG1Q9H7V2 258 aa21.16■□□□□ 0.98
VSX1-206ENST00000444511 THSD1Q9NS62 852 aa21.16■□□□□ 0.98
VSX1-206ENST00000444511 SIRPGQ9P1W8 387 aa21.16■□□□□ 0.98
VSX1-206ENST00000444511 SATB2Q9UPW6 733 aa21.16■□□□□ 0.98
VSX1-206ENST00000444511 RECQL5O94762 991 aaPredicted RBP21.15■□□□□ 0.98
VSX1-206ENST00000444511 ELFN1P0C7U0 828 aa21.15■□□□□ 0.98
VSX1-206ENST00000444511 TDRD12Q587J7 1177 aaKnown RBP21.15■□□□□ 0.98
VSX1-206ENST00000444511 GKN2Q86XP6 184 aa21.15■□□□□ 0.98
VSX1-206ENST00000444511 SDR16C5Q8N3Y7 309 aa21.15■□□□□ 0.98
VSX1-206ENST00000444511 HIC2Q96JB3 615 aa21.15■□□□□ 0.98
VSX1-206ENST00000444511 PSKH2Q96QS6 385 aa21.15■□□□□ 0.98
VSX1-206ENST00000444511 ISCUQ9H1K1 167 aa21.15■□□□□ 0.98
VSX1-206ENST00000444511 GPR34Q9UPC5 381 aa21.15■□□□□ 0.98
VSX1-206ENST00000444511 ENTPD2Q9Y5L3 495 aa21.15■□□□□ 0.98
VSX1-206ENST00000444511 LOC400499M0QZD8 3231 aa21.15■□□□□ 0.98
VSX1-206ENST00000444511 CACNB4O00305 520 aaPredicted RBP21.14■□□□□ 0.97
VSX1-206ENST00000444511 TNFP01375 233 aa21.14■□□□□ 0.97
VSX1-206ENST00000444511 IL1R2P27930 398 aa21.14■□□□□ 0.97
VSX1-206ENST00000444511 RBMS1P29558 406 aaKnown RBP21.14■□□□□ 0.97
VSX1-206ENST00000444511 RALGDSQ12967 914 aa21.14■□□□□ 0.97
VSX1-206ENST00000444511 SPIDRQ14159 915 aa21.14■□□□□ 0.97
VSX1-206ENST00000444511 ZNF235Q14590 738 aa21.14■□□□□ 0.97
VSX1-206ENST00000444511 NR1I3Q14994 352 aa21.14■□□□□ 0.97
VSX1-206ENST00000444511 DPYSL2Q16555 572 aa21.14■□□□□ 0.97
VSX1-206ENST00000444511 SMTNL2Q2TAL5 461 aa21.14■□□□□ 0.97
VSX1-206ENST00000444511 BOLA3Q53S33 107 aa21.14■□□□□ 0.97
VSX1-206ENST00000444511 BROXQ5VW32 411 aa21.14■□□□□ 0.97
VSX1-206ENST00000444511 TMCO3Q6UWJ1 677 aa21.14■□□□□ 0.97
VSX1-206ENST00000444511 LIPIQ6XZB0 460 aa21.14■□□□□ 0.97
VSX1-206ENST00000444511 DPPA4Q7L190 304 aa21.14■□□□□ 0.97
VSX1-206ENST00000444511 TP53INP2Q8IXH6 220 aa21.14■□□□□ 0.97
VSX1-206ENST00000444511 KYQ8NBH2 561 aa21.14■□□□□ 0.97
VSX1-206ENST00000444511 PLA2G15Q8NCC3 412 aa21.14■□□□□ 0.97
VSX1-206ENST00000444511 HSPH1Q92598 858 aa21.14■□□□□ 0.97
VSX1-206ENST00000444511 ZNF599Q96NL3 588 aa21.14■□□□□ 0.97
VSX1-206ENST00000444511 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP21.14■□□□□ 0.97
VSX1-206ENST00000444511 ASCL3Q9NQ33 180 aa21.14■□□□□ 0.97
VSX1-206ENST00000444511 STAU2Q9NUL3 570 aaKnown RBP eCLIP21.14■□□□□ 0.97
VSX1-206ENST00000444511 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP21.13■□□□□ 0.97
VSX1-206ENST00000444511 TRAFD1O14545 582 aaPredicted RBP21.13■□□□□ 0.97
VSX1-206ENST00000444511 CXADRP78310 365 aa21.13■□□□□ 0.97
VSX1-206ENST00000444511 SLC10A7Q0GE19 358 aa21.13■□□□□ 0.97
VSX1-206ENST00000444511 IQCB1Q15051 598 aa21.13■□□□□ 0.97
VSX1-206ENST00000444511 FIGNQ5HY92 759 aa21.13■□□□□ 0.97
VSX1-206ENST00000444511 NYAP1Q6ZVC0 841 aa21.13■□□□□ 0.97
VSX1-206ENST00000444511 GPR155Q7Z3F1 870 aa21.13■□□□□ 0.97
VSX1-206ENST00000444511 KCNE4Q8WWG9 221 aa21.13■□□□□ 0.97
VSX1-206ENST00000444511 PDXPQ96GD0 296 aa21.13■□□□□ 0.97
VSX1-206ENST00000444511 A8MX80 341 aa21.12■□□□□ 0.97
VSX1-206ENST00000444511 AMPD1P23109 780 aa21.12■□□□□ 0.97
VSX1-206ENST00000444511 KELP23276 732 aa21.12■□□□□ 0.97
VSX1-206ENST00000444511 KIAA1024LP59773 190 aa21.12■□□□□ 0.97
VSX1-206ENST00000444511 TPM4P67936 248 aa21.12■□□□□ 0.97
VSX1-206ENST00000444511 PIGHQ14442 188 aaPredicted RBP21.12■□□□□ 0.97
VSX1-206ENST00000444511 ACOX1Q15067 660 aa21.12■□□□□ 0.97
VSX1-206ENST00000444511 FOXR1Q6PIV2 292 aa21.12■□□□□ 0.97
VSX1-206ENST00000444511 IGF2-ASQ6U949 168 aa21.12■□□□□ 0.97
VSX1-206ENST00000444511 POLNQ7Z5Q5 900 aa21.12■□□□□ 0.97
VSX1-206ENST00000444511 BBS5Q8N3I7 341 aa21.12■□□□□ 0.97
VSX1-206ENST00000444511 OR56A4Q8NGH8 313 aa21.12■□□□□ 0.97
VSX1-206ENST00000444511 FUBP1Q96AE4 644 aaKnown RBP21.12■□□□□ 0.97
VSX1-206ENST00000444511 CCDC74AQ96AQ1 378 aa21.12■□□□□ 0.97
VSX1-206ENST00000444511 RBM15Q96T37 977 aaKnown RBP eCLIP21.12■□□□□ 0.97
VSX1-206ENST00000444511 PCDHGA8Q9Y5G5 932 aa21.12■□□□□ 0.97
VSX1-206ENST00000444511 BZW2Q9Y6E2 419 aaKnown RBP21.12■□□□□ 0.97
VSX1-206ENST00000444511 DGKBQ9Y6T7 804 aa21.12■□□□□ 0.97
VSX1-206ENST00000444511 BAHCC1Q9P281 2608 aa21.11■□□□□ 0.97
VSX1-206ENST00000444511 A0A1W2PNU3 283 aaPredicted RBP21.11■□□□□ 0.97
VSX1-206ENST00000444511 A0A1W2PQ67 120 aa21.11■□□□□ 0.97
VSX1-206ENST00000444511 TTC24A2A3L6 582 aaPredicted RBP21.11■□□□□ 0.97
VSX1-206ENST00000444511 TMEM202A6NGA9 273 aa21.11■□□□□ 0.97
VSX1-206ENST00000444511 CASC3O15234 703 aaKnown RBP21.11■□□□□ 0.97
VSX1-206ENST00000444511 TCF4P15884 667 aa21.11■□□□□ 0.97
VSX1-206ENST00000444511 HSPA9P38646 679 aaKnown RBP21.11■□□□□ 0.97
VSX1-206ENST00000444511 UCNP55089 124 aa21.11■□□□□ 0.97
VSX1-206ENST00000444511 KCTD16Q68DU8 428 aa21.11■□□□□ 0.97
VSX1-206ENST00000444511 WDR36Q8NI36 951 aaKnown RBP21.11■□□□□ 0.97
VSX1-206ENST00000444511 PDCD6IPQ8WUM4 868 aaKnown RBP21.11■□□□□ 0.97
VSX1-206ENST00000444511 NSMCE1Q8WV22 266 aa21.11■□□□□ 0.97
VSX1-206ENST00000444511 OR1E3Q8WZA6 343 aa21.11■□□□□ 0.97
VSX1-206ENST00000444511 NSMCE3Q96MG7 304 aa21.11■□□□□ 0.97
VSX1-206ENST00000444511 SLC46A1Q96NT5 459 aa21.11■□□□□ 0.97
VSX1-206ENST00000444511 CSPG4P5Q96PW8 444 aa21.11■□□□□ 0.97
VSX1-206ENST00000444511 ETNK2Q9NVF9 386 aa21.11■□□□□ 0.97
VSX1-206ENST00000444511 B4GALT6Q9UBX8 382 aa21.11■□□□□ 0.97
VSX1-206ENST00000444511 PCDHGC4Q9Y5F7 938 aa21.11■□□□□ 0.97
VSX1-206ENST00000444511 TEX51A0A1B0GUA7 166 aa21.1■□□□□ 0.97
VSX1-206ENST00000444511 ATXN7O15265 892 aaPredicted RBP21.1■□□□□ 0.97
VSX1-206ENST00000444511 KLK10O43240 276 aa21.1■□□□□ 0.97
VSX1-206ENST00000444511 SOCS5O75159 536 aa21.1■□□□□ 0.97
VSX1-206ENST00000444511 RARAP10276 462 aa21.1■□□□□ 0.97
VSX1-206ENST00000444511 NFKBIAP25963 317 aa21.1■□□□□ 0.97
VSX1-206ENST00000444511 SERPINB6P35237 376 aa21.1■□□□□ 0.97
VSX1-206ENST00000444511 TMPRSS3P57727 454 aa21.1■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 93.3 ms