RNA–Protein interactions for RNA: ENST00000392455.7

CCDC50-201, Transcript of coiled-coil domain containing 50, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CCDC50, Length 8,429 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50-201ENST00000392455 ZC3H13Q5T200 1668 aaKnown RBP14.8□□□□□ -0.04
CCDC50-201ENST00000392455 PPP1R3GB7ZBB8 358 aa14.8□□□□□ -0.04
CCDC50-201ENST00000392455 CLCN3P51790 818 aa14.8□□□□□ -0.04
CCDC50-201ENST00000392455 FAM131AQ6UXB0 335 aa14.8□□□□□ -0.04
CCDC50-201ENST00000392455 SPACA7Q96KW9 195 aa14.8□□□□□ -0.04
CCDC50-201ENST00000392455 TRNT1Q96Q11 434 aaKnown RBP14.8□□□□□ -0.04
CCDC50-201ENST00000392455 DPEP1P16444 411 aa14.79□□□□□ -0.04
CCDC50-201ENST00000392455 HTR1BP28222 390 aa14.79□□□□□ -0.04
CCDC50-201ENST00000392455 CDKL4Q5MAI5 379 aa14.79□□□□□ -0.04
CCDC50-201ENST00000392455 PAMR1Q6UXH9 720 aa14.79□□□□□ -0.04
CCDC50-201ENST00000392455 CASTOR2A6NHX0 329 aa14.79□□□□□ -0.04
CCDC50-201ENST00000392455 BBIP1A8MTZ0 92 aa14.79□□□□□ -0.04
CCDC50-201ENST00000392455 PECAM1P16284 738 aaPredicted RBP14.79□□□□□ -0.04
CCDC50-201ENST00000392455 CSHL1Q14406 222 aa14.79□□□□□ -0.04
CCDC50-201ENST00000392455 CASKIN2Q8WXE0 1202 aa14.79□□□□□ -0.04
CCDC50-201ENST00000392455 SP140LQ9H930 580 aa14.79□□□□□ -0.04
CCDC50-201ENST00000392455 ACTL7BQ9Y614 415 aa14.79□□□□□ -0.04
CCDC50-201ENST00000392455 GNA12Q03113 381 aa14.79□□□□□ -0.04
CCDC50-201ENST00000392455 FAM76BQ5HYJ3 339 aa14.79□□□□□ -0.04
CCDC50-201ENST00000392455 CWF19L1Q69YN2 538 aaKnown RBP14.79□□□□□ -0.04
CCDC50-201ENST00000392455 AFTPHQ6ULP2 937 aa14.79□□□□□ -0.04
CCDC50-201ENST00000392455 DSELQ8IZU8 1212 aa14.79□□□□□ -0.04
CCDC50-201ENST00000392455 CD248Q9HCU0 757 aa14.79□□□□□ -0.04
CCDC50-201ENST00000392455 RIIAD1A6NNX1 92 aa14.79□□□□□ -0.04
CCDC50-201ENST00000392455 RBM4BQ9BQ04 359 aaKnown RBP14.79□□□□□ -0.04
CCDC50-201ENST00000392455 RBM4Q9BWF3 364 aaKnown RBP14.79□□□□□ -0.04
CCDC50-201ENST00000392455 ATXN3LQ9H3M9 355 aa14.79□□□□□ -0.04
CCDC50-201ENST00000392455 KANTRA0A1W2PQU2 76 aa14.79□□□□□ -0.04
CCDC50-201ENST00000392455 C1QBPQ07021 282 aaKnown RBP14.79□□□□□ -0.04
CCDC50-201ENST00000392455 E2F2Q14209 437 aa14.79□□□□□ -0.04
CCDC50-201ENST00000392455 GPR158Q5T848 1215 aa14.79□□□□□ -0.04
CCDC50-201ENST00000392455 RHBDF1Q96CC6 855 aa14.79□□□□□ -0.04
CCDC50-201ENST00000392455 RABL2AQ9UBK7 228 aaPredicted RBP14.79□□□□□ -0.04
CCDC50-201ENST00000392455 RABL2BQ9UNT1 228 aa14.79□□□□□ -0.04
CCDC50-201ENST00000392455 KRT36O76013 467 aa14.79□□□□□ -0.04
CCDC50-201ENST00000392455 ZNF697Q5TEC3 545 aa14.79□□□□□ -0.04
CCDC50-201ENST00000392455 GTF2IRD2BQ6EKJ0 949 aa14.79□□□□□ -0.04
CCDC50-201ENST00000392455 BORAQ6PGQ7 559 aa14.79□□□□□ -0.04
CCDC50-201ENST00000392455 GTF2IRD2Q86UP8 949 aa14.79□□□□□ -0.04
CCDC50-201ENST00000392455 PCSK9Q8NBP7 692 aaKnown RBP14.79□□□□□ -0.04
CCDC50-201ENST00000392455 PRPF19Q9UMS4 504 aaKnown RBP14.79□□□□□ -0.04
CCDC50-201ENST00000392455 CBX4O00257 560 aa14.79□□□□□ -0.04
CCDC50-201ENST00000392455 SNRPB2P08579 225 aaKnown RBP14.79□□□□□ -0.04
CCDC50-201ENST00000392455 ILDR2Q71H61 639 aa14.79□□□□□ -0.04
CCDC50-201ENST00000392455 PLEKHH3Q7Z736 793 aa14.79□□□□□ -0.04
CCDC50-201ENST00000392455 TBC1D21Q8IYX1 336 aa14.79□□□□□ -0.04
CCDC50-201ENST00000392455 PCDH19Q8TAB3 1148 aa14.79□□□□□ -0.04
CCDC50-201ENST00000392455 LRRC20Q8TCA0 184 aa14.79□□□□□ -0.04
CCDC50-201ENST00000392455 PNPT1Q8TCS8 783 aaKnown RBP14.79□□□□□ -0.04
CCDC50-201ENST00000392455 TOR4AQ9NXH8 423 aa14.79□□□□□ -0.04
CCDC50-201ENST00000392455 MRPS22P82650 360 aaKnown RBP14.78□□□□□ -0.04
CCDC50-201ENST00000392455 MCFD2Q8NI22 146 aa14.78□□□□□ -0.04
CCDC50-201ENST00000392455 CIPCQ9C0C6 399 aa14.78□□□□□ -0.04
CCDC50-201ENST00000392455 C14orf105Q9NVL8 296 aa14.78□□□□□ -0.04
CCDC50-201ENST00000392455 IFT80Q9P2H3 777 aaPredicted RBP14.78□□□□□ -0.04
CCDC50-201ENST00000392455 OR1I1O60431 355 aa14.78□□□□□ -0.04
CCDC50-201ENST00000392455 CCNKO75909 580 aa14.78□□□□□ -0.04
CCDC50-201ENST00000392455 SCNN1BP51168 640 aa14.78□□□□□ -0.04
CCDC50-201ENST00000392455 AP2S1P53680 142 aaPredicted RBP14.78□□□□□ -0.04
CCDC50-201ENST00000392455 PABPC1LQ4VXU2 614 aaKnown RBP14.78□□□□□ -0.04
CCDC50-201ENST00000392455 PTCHD4Q6ZW05 846 aa14.78□□□□□ -0.04
CCDC50-201ENST00000392455 UBE2Q1Q7Z7E8 422 aa14.78□□□□□ -0.04
CCDC50-201ENST00000392455 SLC12A8A0AV02 714 aa14.78□□□□□ -0.04
CCDC50-201ENST00000392455 FOXN3O00409 490 aaPredicted RBP14.78□□□□□ -0.04
CCDC50-201ENST00000392455 GRM3Q14832 879 aa14.78□□□□□ -0.04
CCDC50-201ENST00000392455 ALG10BQ5I7T1 473 aa14.78□□□□□ -0.04
CCDC50-201ENST00000392455 SLC47A2Q86VL8 602 aa14.78□□□□□ -0.04
CCDC50-201ENST00000392455 DNAJB14Q8TBM8 379 aa14.78□□□□□ -0.04
CCDC50-201ENST00000392455 MTG1Q9BT17 334 aaPredicted RBP14.78□□□□□ -0.04
CCDC50-201ENST00000392455 ENY2Q9NPA8 101 aa14.78□□□□□ -0.04
CCDC50-201ENST00000392455 CCDC167Q9P0B6 97 aa14.78□□□□□ -0.04
CCDC50-201ENST00000392455 GULP1Q9UBP9 304 aa14.78□□□□□ -0.04
CCDC50-201ENST00000392455 SRRM3A6NNA2 597 aaPredicted RBP14.78□□□□□ -0.04
CCDC50-201ENST00000392455 HMGCRP04035 888 aa14.78□□□□□ -0.04
CCDC50-201ENST00000392455 DNTTP04053 509 aa14.78□□□□□ -0.04
CCDC50-201ENST00000392455 ZNF37AP17032 561 aaPredicted RBP14.78□□□□□ -0.04
CCDC50-201ENST00000392455 DDX59Q5T1V6 619 aaKnown RBP eCLIP14.78□□□□□ -0.04
CCDC50-201ENST00000392455 RCOR3Q9P2K3 495 aaPredicted RBP14.78□□□□□ -0.04
CCDC50-201ENST00000392455 CNTNAP2Q9UHC6 1331 aa14.78□□□□□ -0.04
CCDC50-201ENST00000392455 SUV39H1O43463 412 aa14.78□□□□□ -0.04
CCDC50-201ENST00000392455 ASMTP46597 345 aa14.78□□□□□ -0.04
CCDC50-201ENST00000392455 ADAMTSL2Q86TH1 951 aa14.78□□□□□ -0.04
CCDC50-201ENST00000392455 PHF12Q96QT6 1004 aa14.78□□□□□ -0.04
CCDC50-201ENST00000392455 JCADQ9P266 1359 aa14.78□□□□□ -0.04
CCDC50-201ENST00000392455 WASHC1A8K0Z3 465 aa14.78□□□□□ -0.04
CCDC50-201ENST00000392455 WASH3PC4AMC7 463 aa14.78□□□□□ -0.04
CCDC50-201ENST00000392455 UBE2Q2LH0YL09 131 aa14.78□□□□□ -0.04
CCDC50-201ENST00000392455 S100PP25815 95 aa14.78□□□□□ -0.04
CCDC50-201ENST00000392455 CEBPGP53567 150 aa14.78□□□□□ -0.04
CCDC50-201ENST00000392455 SEC24CP53992 1094 aa14.78□□□□□ -0.04
CCDC50-201ENST00000392455 ZDHHC20Q5W0Z9 365 aa14.78□□□□□ -0.04
CCDC50-201ENST00000392455 IQSEC1Q6DN90 963 aa14.78□□□□□ -0.04
CCDC50-201ENST00000392455 WASH2PQ6VEQ5 465 aa14.78□□□□□ -0.04
CCDC50-201ENST00000392455 FBXO33Q7Z6M2 555 aa14.78□□□□□ -0.04
CCDC50-201ENST00000392455 MAFIPQ8WZ33 124 aa14.78□□□□□ -0.04
CCDC50-201ENST00000392455 GRIP2Q9C0E4 1043 aa14.78□□□□□ -0.04
CCDC50-201ENST00000392455 CLUHO75153 1309 aa14.78□□□□□ -0.04
CCDC50-201ENST00000392455 DEFB128Q7Z7B8 93 aa14.77□□□□□ -0.04
CCDC50-201ENST00000392455 FCGR1BQ92637 280 aa14.77□□□□□ -0.04
CCDC50-201ENST00000392455 TMEM68Q96MH6 324 aa14.77□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms