RNA–Protein interactions for RNA: ENST00000374512.7

PHF1-201, Transcript of PHD finger protein 1, humanhuman

TSL 1 (best) BASIC

Gene PHF1, Length 2,224 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1-201ENST00000374512 GOLM1Q8NBJ4 401 aa18.03■□□□□ 0.48
PHF1-201ENST00000374512 PCYOX1LQ8NBM8 494 aa18.03■□□□□ 0.48
PHF1-201ENST00000374512 GFM2Q969S9 779 aaKnown RBP18.03■□□□□ 0.48
PHF1-201ENST00000374512 SIK2Q9H0K1 926 aa18.03■□□□□ 0.48
PHF1-201ENST00000374512 UPF3AQ9H1J1 476 aaKnown RBP18.03■□□□□ 0.48
PHF1-201ENST00000374512 SLC25A51Q9H1U9 297 aa18.03■□□□□ 0.48
PHF1-201ENST00000374512 PNPLA3Q9NST1 481 aa18.03■□□□□ 0.48
PHF1-201ENST00000374512 ARMC1Q9NVT9 282 aa18.03■□□□□ 0.48
PHF1-201ENST00000374512 CCDC167Q9P0B6 97 aa18.03■□□□□ 0.48
PHF1-201ENST00000374512 CIDEBQ9UHD4 219 aa18.03■□□□□ 0.48
PHF1-201ENST00000374512 AK5Q9Y6K8 562 aa18.03■□□□□ 0.48
PHF1-201ENST00000374512 C7orf72A4D263 438 aa18.03■□□□□ 0.48
PHF1-201ENST00000374512 PRORSD1PA6NEY8 169 aa18.03■□□□□ 0.48
PHF1-201ENST00000374512 NEMP2A6NFY4 417 aa18.03■□□□□ 0.48
PHF1-201ENST00000374512 TNPO2O14787 897 aaKnown RBP18.03■□□□□ 0.48
PHF1-201ENST00000374512 AKR1A1P14550 325 aa18.03■□□□□ 0.48
PHF1-201ENST00000374512 ATXN3P54252 364 aaPredicted RBP18.03■□□□□ 0.48
PHF1-201ENST00000374512 NFKB2Q00653 900 aa18.03■□□□□ 0.48
PHF1-201ENST00000374512 NRG1Q02297 640 aaPredicted RBP18.03■□□□□ 0.48
PHF1-201ENST00000374512 UPP1Q16831 310 aa18.03■□□□□ 0.48
PHF1-201ENST00000374512 HERC6Q8IVU3 1022 aa18.03■□□□□ 0.48
PHF1-201ENST00000374512 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP18.03■□□□□ 0.48
PHF1-201ENST00000374512 PACRGLQ8N7B6 248 aa18.03■□□□□ 0.48
PHF1-201ENST00000374512 ANKFN1Q8N957 763 aa18.03■□□□□ 0.48
PHF1-201ENST00000374512 HM13Q8TCT9 377 aa18.03■□□□□ 0.48
PHF1-201ENST00000374512 LRTOMTQ8WZ04 291 aa18.03■□□□□ 0.48
PHF1-201ENST00000374512 LZICQ8WZA0 190 aa18.03■□□□□ 0.48
PHF1-201ENST00000374512 ZUFSPQ96AP4 578 aa18.03■□□□□ 0.48
PHF1-201ENST00000374512 ZNF419Q96HQ0 510 aaPredicted RBP18.03■□□□□ 0.48
PHF1-201ENST00000374512 ZCWPW1Q9H0M4 648 aa18.03■□□□□ 0.48
PHF1-201ENST00000374512 PCDHAC1Q9H158 963 aa18.03■□□□□ 0.48
PHF1-201ENST00000374512 VPS45Q9NRW7 570 aa18.03■□□□□ 0.48
PHF1-201ENST00000374512 ABCC13Q9NSE7 274 aa18.03■□□□□ 0.48
PHF1-201ENST00000374512 MTF2Q9Y483 593 aaPredicted RBP18.03■□□□□ 0.48
PHF1-201ENST00000374512 KPNA6O60684 536 aa18.02■□□□□ 0.48
PHF1-201ENST00000374512 PAGE1O75459 146 aa18.02■□□□□ 0.48
PHF1-201ENST00000374512 CCDC166P0CW27 439 aa18.02■□□□□ 0.48
PHF1-201ENST00000374512 BMP2P12643 396 aa18.02■□□□□ 0.48
PHF1-201ENST00000374512 STX1BP61266 288 aa18.02■□□□□ 0.48
PHF1-201ENST00000374512 SEPT6Q14141 434 aa18.02■□□□□ 0.48
PHF1-201ENST00000374512 SPATS1Q496A3 300 aa18.02■□□□□ 0.48
PHF1-201ENST00000374512 PRMT9Q6P2P2 845 aa18.02■□□□□ 0.48
PHF1-201ENST00000374512 LARP4Q71RC2 724 aaKnown RBP eCLIP18.02■□□□□ 0.48
PHF1-201ENST00000374512 SLCO4A1Q96BD0 722 aa18.02■□□□□ 0.48
PHF1-201ENST00000374512 ATP13A1Q9HD20 1204 aa18.02■□□□□ 0.48
PHF1-201ENST00000374512 OSER1Q9NX31 292 aa18.02■□□□□ 0.48
PHF1-201ENST00000374512 MYRFQ9Y2G1 1151 aa18.02■□□□□ 0.48
PHF1-201ENST00000374512 RNF11Q9Y3C5 154 aa18.02■□□□□ 0.48
PHF1-201ENST00000374512 MYLKQ15746 1914 aa18.02■□□□□ 0.48
PHF1-201ENST00000374512 WASH4PA8MWX3 477 aa18.02■□□□□ 0.47
PHF1-201ENST00000374512 SLC7A4O43246 635 aa18.02■□□□□ 0.47
PHF1-201ENST00000374512 SPATA31D3P0C874 917 aa18.02■□□□□ 0.47
PHF1-201ENST00000374512 CDH2P19022 906 aaPredicted RBP18.02■□□□□ 0.47
PHF1-201ENST00000374512 BDNFP23560 247 aa18.02■□□□□ 0.47
PHF1-201ENST00000374512 PAX3P23760 479 aa18.02■□□□□ 0.47
PHF1-201ENST00000374512 WNT3AP56704 352 aa18.02■□□□□ 0.47
PHF1-201ENST00000374512 RBM20Q5T481 1227 aaKnown RBP18.02■□□□□ 0.47
PHF1-201ENST00000374512 PPP4R4Q6NUP7 873 aa18.02■□□□□ 0.47
PHF1-201ENST00000374512 AGMOQ6ZNB7 445 aa18.02■□□□□ 0.47
PHF1-201ENST00000374512 SPATA31D4Q6ZUB0 917 aa18.02■□□□□ 0.47
PHF1-201ENST00000374512 METTL23Q86XA0 190 aa18.02■□□□□ 0.47
PHF1-201ENST00000374512 DHFR2Q86XF0 187 aa18.02■□□□□ 0.47
PHF1-201ENST00000374512 OLFM1Q99784 485 aa18.02■□□□□ 0.47
PHF1-201ENST00000374512 HOPXQ9BPY8 73 aaPredicted RBP18.02■□□□□ 0.47
PHF1-201ENST00000374512 RTP3Q9BQQ7 232 aa18.02■□□□□ 0.47
PHF1-201ENST00000374512 PAAF1Q9BRP4 392 aa18.02■□□□□ 0.47
PHF1-201ENST00000374512 ANKRD60Q9BZ19 345 aa18.02■□□□□ 0.47
PHF1-201ENST00000374512 SMOC2Q9H3U7 446 aa18.02■□□□□ 0.47
PHF1-201ENST00000374512 GSTO2Q9H4Y5 243 aa18.02■□□□□ 0.47
PHF1-201ENST00000374512 VWA7Q9Y334 891 aa18.02■□□□□ 0.47
PHF1-201ENST00000374512 SNX13Q9Y5W8 968 aa18.02■□□□□ 0.47
PHF1-201ENST00000374512 CEPT1Q9Y6K0 416 aa18.02■□□□□ 0.47
PHF1-201ENST00000374512 PCNTO95613 3336 aa18.01■□□□□ 0.47
PHF1-201ENST00000374512 H3BNH8 94 aa18.01■□□□□ 0.47
PHF1-201ENST00000374512 DUSP11O75319 330 aaKnown RBP18.01■□□□□ 0.47
PHF1-201ENST00000374512 TRPA1O75762 1119 aa18.01■□□□□ 0.47
PHF1-201ENST00000374512 HOXB8P17481 243 aaPredicted RBP18.01■□□□□ 0.47
PHF1-201ENST00000374512 KCNA5P22460 613 aa18.01■□□□□ 0.47
PHF1-201ENST00000374512 ALDH3B2P48448 385 aa18.01■□□□□ 0.47
PHF1-201ENST00000374512 SERPINH1P50454 418 aaKnown RBP18.01■□□□□ 0.47
PHF1-201ENST00000374512 NRF1Q16656 503 aa18.01■□□□□ 0.47
PHF1-201ENST00000374512 HECTD2Q5U5R9 776 aa18.01■□□□□ 0.47
PHF1-201ENST00000374512 KDELC1Q6UW63 502 aa18.01■□□□□ 0.47
PHF1-201ENST00000374512 TRIML2Q8N7C3 387 aa18.01■□□□□ 0.47
PHF1-201ENST00000374512 RTL3Q8N8U3 475 aaKnown RBP18.01■□□□□ 0.47
PHF1-201ENST00000374512 CCT7Q99832 543 aa18.01■□□□□ 0.47
PHF1-201ENST00000374512 TRIM15Q9C019 465 aa18.01■□□□□ 0.47
PHF1-201ENST00000374512 CYP4F12Q9HCS2 524 aa18.01■□□□□ 0.47
PHF1-201ENST00000374512 TRMUO75648 421 aaKnown RBP18■□□□□ 0.47
PHF1-201ENST00000374512 WISP3O95389 354 aaPredicted RBP18■□□□□ 0.47
PHF1-201ENST00000374512 CTSHP09668 335 aa18■□□□□ 0.47
PHF1-201ENST00000374512 MAPRE1Q15691 268 aaKnown RBP18■□□□□ 0.47
PHF1-201ENST00000374512 MAP7D1Q3KQU3 841 aa18■□□□□ 0.47
PHF1-201ENST00000374512 C6orf10Q5SRN2 563 aa18■□□□□ 0.47
PHF1-201ENST00000374512 KRT80Q6KB66 452 aa18■□□□□ 0.47
PHF1-201ENST00000374512 AMIGO2Q86SJ2 522 aa18■□□□□ 0.47
PHF1-201ENST00000374512 IFNL1Q8IU54 200 aa18■□□□□ 0.47
PHF1-201ENST00000374512 OR2T34Q8NGX1 318 aa18■□□□□ 0.47
PHF1-201ENST00000374512 OR2T3Q8NH03 318 aa18■□□□□ 0.47
PHF1-201ENST00000374512 FCRL2Q96LA5 508 aaPredicted RBP18■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms