RNA–Protein interactions for RNA: ENST00000373019.4

SF3A3-201, Transcript of splicing factor 3a subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3A3, Length 3,673 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-201ENST00000373019 DDX28Q9NUL7 540 aaKnown RBP9.6□□□□□ -0.87
SF3A3-201ENST00000373019 MN1Q10571 1320 aaPredicted RBP9.6□□□□□ -0.87
SF3A3-201ENST00000373019 C12orf71A8MTZ7 269 aa9.6□□□□□ -0.87
SF3A3-201ENST00000373019 KCNJ13O60928 360 aa9.6□□□□□ -0.87
SF3A3-201ENST00000373019 PSMD10O75832 226 aa9.6□□□□□ -0.87
SF3A3-201ENST00000373019 CAPN1P07384 714 aa9.6□□□□□ -0.87
SF3A3-201ENST00000373019 FASP25445 335 aa9.6□□□□□ -0.87
SF3A3-201ENST00000373019 ACVR2AP27037 513 aa9.6□□□□□ -0.87
SF3A3-201ENST00000373019 GNA15P30679 374 aa9.6□□□□□ -0.87
SF3A3-201ENST00000373019 AP2S1P53680 142 aaPredicted RBP9.6□□□□□ -0.87
SF3A3-201ENST00000373019 B2MP61769 119 aa9.6□□□□□ -0.87
SF3A3-201ENST00000373019 LSM3P62310 102 aaKnown RBP9.6□□□□□ -0.87
SF3A3-201ENST00000373019 ROR1Q01973 937 aa9.6□□□□□ -0.87
SF3A3-201ENST00000373019 SNTA1Q13424 505 aa9.6□□□□□ -0.87
SF3A3-201ENST00000373019 PDK2Q15119 407 aa9.6□□□□□ -0.87
SF3A3-201ENST00000373019 SKIV2LQ15477 1246 aaKnown RBP9.6□□□□□ -0.87
SF3A3-201ENST00000373019 DGUOKQ16854 277 aa9.6□□□□□ -0.87
SF3A3-201ENST00000373019 KIZQ2M2Z5 673 aa9.6□□□□□ -0.87
SF3A3-201ENST00000373019 NXNL2Q5VZ03 156 aa9.6□□□□□ -0.87
SF3A3-201ENST00000373019 NXNQ6DKJ4 435 aa9.6□□□□□ -0.87
SF3A3-201ENST00000373019 CYS1Q717R9 158 aa9.6□□□□□ -0.87
SF3A3-201ENST00000373019 SPPL2CQ8IUH8 684 aa9.6□□□□□ -0.87
SF3A3-201ENST00000373019 THNSL1Q8IYQ7 743 aa9.6□□□□□ -0.87
SF3A3-201ENST00000373019 METTL4Q8N3J2 472 aa9.6□□□□□ -0.87
SF3A3-201ENST00000373019 PQLC3Q8N755 202 aa9.6□□□□□ -0.87
SF3A3-201ENST00000373019 GALNT6Q8NCL4 622 aa9.6□□□□□ -0.87
SF3A3-201ENST00000373019 PIK3R3Q92569 461 aa9.6□□□□□ -0.87
SF3A3-201ENST00000373019 UBXN10Q96LJ8 280 aa9.6□□□□□ -0.87
SF3A3-201ENST00000373019 CHRAC1Q9NRG0 131 aa9.6□□□□□ -0.87
SF3A3-201ENST00000373019 ACOXLQ9NUZ1 547 aa9.6□□□□□ -0.87
SF3A3-201ENST00000373019 TBC1D13Q9NVG8 400 aa9.6□□□□□ -0.87
SF3A3-201ENST00000373019 UCKL1Q9NWZ5 548 aa9.6□□□□□ -0.87
SF3A3-201ENST00000373019 TOR4AQ9NXH8 423 aa9.6□□□□□ -0.87
SF3A3-201ENST00000373019 FBXL12Q9NXK8 326 aa9.6□□□□□ -0.87
SF3A3-201ENST00000373019 NPAP1Q9NZP6 1156 aa9.6□□□□□ -0.87
SF3A3-201ENST00000373019 RAP2CQ9Y3L5 183 aa9.6□□□□□ -0.87
SF3A3-201ENST00000373019 ARID2Q68CP9 1835 aa9.6□□□□□ -0.87
SF3A3-201ENST00000373019 IGKV6D-41A0A0C4DH26 115 aa9.6□□□□□ -0.87
SF3A3-201ENST00000373019 DHRS12A0PJE2 317 aa9.6□□□□□ -0.87
SF3A3-201ENST00000373019 CENPXA8MT69 81 aa9.6□□□□□ -0.87
SF3A3-201ENST00000373019 DAB1O75553 588 aa9.6□□□□□ -0.87
SF3A3-201ENST00000373019 BMP1P13497 986 aa9.6□□□□□ -0.87
SF3A3-201ENST00000373019 IL7RP16871 459 aa9.6□□□□□ -0.87
SF3A3-201ENST00000373019 FMO4P31512 558 aa9.6□□□□□ -0.87
SF3A3-201ENST00000373019 YBX1P67809 324 aaKnown RBP9.6□□□□□ -0.87
SF3A3-201ENST00000373019 GTF2BQ00403 316 aa9.6□□□□□ -0.87
SF3A3-201ENST00000373019 FCHO2Q0JRZ9 810 aa9.6□□□□□ -0.87
SF3A3-201ENST00000373019 TARDBPQ13148 414 aaKnown RBP eCLIP9.6□□□□□ -0.87
SF3A3-201ENST00000373019 NOMO1Q15155 1222 aa9.6□□□□□ -0.87
SF3A3-201ENST00000373019 ZNF181Q2M3W8 571 aa9.6□□□□□ -0.87
SF3A3-201ENST00000373019 ZFP69Q49AA0 526 aa9.6□□□□□ -0.87
SF3A3-201ENST00000373019 PAGE2Q7Z2X7 111 aa9.6□□□□□ -0.87
SF3A3-201ENST00000373019 CACTIN-AS1Q8N1I8 211 aa9.6□□□□□ -0.87
SF3A3-201ENST00000373019 PELI3Q8N2H9 469 aa9.6□□□□□ -0.87
SF3A3-201ENST00000373019 BIRC7Q96CA5 298 aa9.6□□□□□ -0.87
SF3A3-201ENST00000373019 SLC39A13Q96H72 371 aa9.6□□□□□ -0.87
SF3A3-201ENST00000373019 ZFYVE19Q96K21 471 aa9.6□□□□□ -0.87
SF3A3-201ENST00000373019 DMRTB1Q96MA1 342 aa9.6□□□□□ -0.87
SF3A3-201ENST00000373019 WDR18Q9BV38 432 aa9.6□□□□□ -0.87
SF3A3-201ENST00000373019 RSAD1Q9HA92 442 aa9.6□□□□□ -0.87
SF3A3-201ENST00000373019 FBXO5Q9UKT4 447 aa9.6□□□□□ -0.87
SF3A3-201ENST00000373019 A8MV72 311 aaPredicted RBP9.59□□□□□ -0.87
SF3A3-201ENST00000373019 TRIM13O60858 407 aa9.59□□□□□ -0.87
SF3A3-201ENST00000373019 SEMA3DO95025 777 aa9.59□□□□□ -0.87
SF3A3-201ENST00000373019 SEC24AO95486 1093 aa9.59□□□□□ -0.87
SF3A3-201ENST00000373019 ARL13AQ5H913 290 aaPredicted RBP9.59□□□□□ -0.87
SF3A3-201ENST00000373019 LAIR2Q6ISS4 152 aa9.59□□□□□ -0.87
SF3A3-201ENST00000373019 C15orf39Q6ZRI6 1047 aa9.59□□□□□ -0.87
SF3A3-201ENST00000373019 STRADAQ7RTN6 431 aa9.59□□□□□ -0.87
SF3A3-201ENST00000373019 VN1R5Q7Z5H4 357 aa9.59□□□□□ -0.87
SF3A3-201ENST00000373019 RFX6Q8HWS3 928 aa9.59□□□□□ -0.87
SF3A3-201ENST00000373019 LRRN4Q8WUT4 740 aa9.59□□□□□ -0.87
SF3A3-201ENST00000373019 MFSD14AQ96MC6 490 aa9.59□□□□□ -0.87
SF3A3-201ENST00000373019 DACH2Q96NX9 599 aa9.59□□□□□ -0.87
SF3A3-201ENST00000373019 MXRA8Q9BRK3 442 aa9.59□□□□□ -0.87
SF3A3-201ENST00000373019 ZNF577Q9BSK1 485 aa9.59□□□□□ -0.87
SF3A3-201ENST00000373019 C1QTNF7Q9BXJ2 289 aa9.59□□□□□ -0.87
SF3A3-201ENST00000373019 FTHL17Q9BXU8 183 aa9.59□□□□□ -0.87
SF3A3-201ENST00000373019 ZNF639Q9UID6 485 aa9.59□□□□□ -0.87
SF3A3-201ENST00000373019 CDYLQ9Y232 598 aa9.59□□□□□ -0.87
SF3A3-201ENST00000373019 RIPK3Q9Y572 518 aa9.59□□□□□ -0.87
SF3A3-201ENST00000373019 ZFC3H1O60293 1989 aaKnown RBP9.59□□□□□ -0.87
SF3A3-201ENST00000373019 A0A1W2PQ72 361 aa9.59□□□□□ -0.87
SF3A3-201ENST00000373019 H0YAE9 185 aa9.59□□□□□ -0.87
SF3A3-201ENST00000373019 M0R3G1 203 aa9.59□□□□□ -0.87
SF3A3-201ENST00000373019 SCO1O75880 301 aa9.59□□□□□ -0.87
SF3A3-201ENST00000373019 GOT2P00505 430 aaKnown RBP9.59□□□□□ -0.87
SF3A3-201ENST00000373019 COL6A1P12109 1028 aa9.59□□□□□ -0.87
SF3A3-201ENST00000373019 IMPDH1P20839 514 aa9.59□□□□□ -0.87
SF3A3-201ENST00000373019 TGFBR1P36897 503 aa9.59□□□□□ -0.87
SF3A3-201ENST00000373019 TMEM270Q6UE05 265 aa9.59□□□□□ -0.87
SF3A3-201ENST00000373019 USP37Q86T82 979 aa9.59□□□□□ -0.87
SF3A3-201ENST00000373019 CLYBLQ8N0X4 340 aa9.59□□□□□ -0.87
SF3A3-201ENST00000373019 LRCH3Q96II8 777 aa9.59□□□□□ -0.87
SF3A3-201ENST00000373019 METTL2AQ96IZ6 378 aaKnown RBP9.59□□□□□ -0.87
SF3A3-201ENST00000373019 RPL10LQ96L21 214 aaKnown RBP9.59□□□□□ -0.87
SF3A3-201ENST00000373019 MYRFLQ96LU7 910 aa9.59□□□□□ -0.87
SF3A3-201ENST00000373019 SDCBP2Q9H190 292 aa9.59□□□□□ -0.87
SF3A3-201ENST00000373019 UPF3AQ9H1J1 476 aaKnown RBP9.59□□□□□ -0.87
SF3A3-201ENST00000373019 ZNF304Q9HCX3 659 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms