RNA–Protein interactions for RNA: ENST00000369462.5

BRCC3-204, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

TSL 1 (best) BASIC

Gene BRCC3, Length 2,846 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-204ENST00000369462 A0A1W2PQ67 120 aa10.99□□□□□ -0.65
BRCC3-204ENST00000369462 C1QTNF3-AMACRE9PGA6 284 aa10.99□□□□□ -0.65
BRCC3-204ENST00000369462 AURKAO14965 403 aa10.99□□□□□ -0.65
BRCC3-204ENST00000369462 BUD23O43709 281 aaKnown RBP10.99□□□□□ -0.65
BRCC3-204ENST00000369462 SLC4A1P02730 911 aa10.99□□□□□ -0.65
BRCC3-204ENST00000369462 COL9A1P20849 921 aa10.99□□□□□ -0.65
BRCC3-204ENST00000369462 ADRA1DP25100 572 aa10.99□□□□□ -0.65
BRCC3-204ENST00000369462 EOGTQ5NDL2 527 aa10.99□□□□□ -0.65
BRCC3-204ENST00000369462 C3orf62Q6ZUJ4 267 aa10.99□□□□□ -0.65
BRCC3-204ENST00000369462 TRMT10CQ7L0Y3 403 aaKnown RBP10.99□□□□□ -0.65
BRCC3-204ENST00000369462 PPHLN1Q8NEY8 458 aaKnown RBP10.99□□□□□ -0.65
BRCC3-204ENST00000369462 FLCNQ8NFG4 579 aa10.99□□□□□ -0.65
BRCC3-204ENST00000369462 UHMK1Q8TAS1 419 aaKnown RBP10.99□□□□□ -0.65
BRCC3-204ENST00000369462 BRSK1Q8TDC3 778 aa10.99□□□□□ -0.65
BRCC3-204ENST00000369462 MFSD3Q96ES6 412 aa10.99□□□□□ -0.65
BRCC3-204ENST00000369462 NELL2Q99435 816 aa10.99□□□□□ -0.65
BRCC3-204ENST00000369462 NAT9Q9BTE0 207 aa10.99□□□□□ -0.65
BRCC3-204ENST00000369462 RSPH9Q9H1X1 276 aaPredicted RBP10.99□□□□□ -0.65
BRCC3-204ENST00000369462 VPS37BQ9H9H4 285 aa10.99□□□□□ -0.65
BRCC3-204ENST00000369462 TBC1D17Q9HA65 648 aa10.99□□□□□ -0.65
BRCC3-204ENST00000369462 DYRK4Q9NR20 520 aa10.99□□□□□ -0.65
BRCC3-204ENST00000369462 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP10.99□□□□□ -0.65
BRCC3-204ENST00000369462 MMP17Q9ULZ9 603 aa10.99□□□□□ -0.65
BRCC3-204ENST00000369462 ARL5AQ9Y689 179 aa10.99□□□□□ -0.65
BRCC3-204ENST00000369462 RPS6KL1Q9Y6S9 549 aa10.99□□□□□ -0.65
BRCC3-204ENST00000369462 MAGEB16A2A368 324 aa10.99□□□□□ -0.65
BRCC3-204ENST00000369462 PLK4O00444 970 aa10.99□□□□□ -0.65
BRCC3-204ENST00000369462 TIMP2P16035 220 aa10.99□□□□□ -0.65
BRCC3-204ENST00000369462 XPAP23025 273 aaPredicted RBP10.99□□□□□ -0.65
BRCC3-204ENST00000369462 HNF1BP35680 557 aa10.99□□□□□ -0.65
BRCC3-204ENST00000369462 HSD17B3P37058 310 aa10.99□□□□□ -0.65
BRCC3-204ENST00000369462 COPAP53621 1224 aa10.99□□□□□ -0.65
BRCC3-204ENST00000369462 FZD5Q13467 585 aa10.99□□□□□ -0.65
BRCC3-204ENST00000369462 LRRC32Q14392 662 aa10.99□□□□□ -0.65
BRCC3-204ENST00000369462 SLC29A2Q14542 456 aa10.99□□□□□ -0.65
BRCC3-204ENST00000369462 CST6Q15828 149 aa10.99□□□□□ -0.65
BRCC3-204ENST00000369462 UAP1Q16222 522 aaPredicted RBP10.99□□□□□ -0.65
BRCC3-204ENST00000369462 HSF5Q4G112 596 aaPredicted RBP10.99□□□□□ -0.65
BRCC3-204ENST00000369462 TJAP1Q5JTD0 557 aa10.99□□□□□ -0.65
BRCC3-204ENST00000369462 FAM46CQ5VWP2 391 aa10.99□□□□□ -0.65
BRCC3-204ENST00000369462 TMEM92Q6UXU6 159 aa10.99□□□□□ -0.65
BRCC3-204ENST00000369462 PARS2Q7L3T8 475 aaKnown RBP10.99□□□□□ -0.65
BRCC3-204ENST00000369462 GLT6D1Q7Z4J2 308 aa10.99□□□□□ -0.65
BRCC3-204ENST00000369462 TMPRSS6Q8IU80 811 aa10.99□□□□□ -0.65
BRCC3-204ENST00000369462 NDUFAF2Q8N183 169 aa10.99□□□□□ -0.65
BRCC3-204ENST00000369462 MDGA1Q8NFP4 955 aa10.99□□□□□ -0.65
BRCC3-204ENST00000369462 OR2T3Q8NH03 318 aa10.99□□□□□ -0.65
BRCC3-204ENST00000369462 ARRDC3Q96B67 414 aa10.99□□□□□ -0.65
BRCC3-204ENST00000369462 SCRN2Q96FV2 425 aa10.99□□□□□ -0.65
BRCC3-204ENST00000369462 PPP1R16AQ96I34 528 aa10.99□□□□□ -0.65
BRCC3-204ENST00000369462 KIFC1Q9BW19 673 aa10.99□□□□□ -0.65
BRCC3-204ENST00000369462 SLC6A17Q9H1V8 727 aa10.99□□□□□ -0.65
BRCC3-204ENST00000369462 DKK3Q9UBP4 350 aa10.99□□□□□ -0.65
BRCC3-204ENST00000369462 SOX13Q9UN79 622 aa10.99□□□□□ -0.65
BRCC3-204ENST00000369462 TCAF1Q9Y4C2 921 aa10.99□□□□□ -0.65
BRCC3-204ENST00000369462 CKAP5Q14008 2032 aa10.99□□□□□ -0.65
BRCC3-204ENST00000369462 HEATR9A2RTY3 570 aa10.99□□□□□ -0.65
BRCC3-204ENST00000369462 MID1O15344 667 aa10.99□□□□□ -0.65
BRCC3-204ENST00000369462 RIPK2O43353 540 aa10.99□□□□□ -0.65
BRCC3-204ENST00000369462 POLBP06746 335 aa10.99□□□□□ -0.65
BRCC3-204ENST00000369462 PGAM1P18669 254 aa10.99□□□□□ -0.65
BRCC3-204ENST00000369462 ITGB7P26010 798 aa10.99□□□□□ -0.65
BRCC3-204ENST00000369462 GPX6P59796 221 aa10.99□□□□□ -0.65
BRCC3-204ENST00000369462 FAM193AP78312 1265 aa10.99□□□□□ -0.65
BRCC3-204ENST00000369462 ZXDAP98168 799 aa10.99□□□□□ -0.65
BRCC3-204ENST00000369462 FBXL19Q6PCT2 694 aa10.99□□□□□ -0.65
BRCC3-204ENST00000369462 UNC5AQ6ZN44 842 aa10.99□□□□□ -0.65
BRCC3-204ENST00000369462 USP45Q70EL2 814 aa10.99□□□□□ -0.65
BRCC3-204ENST00000369462 TMEM135Q86UB9 458 aa10.99□□□□□ -0.65
BRCC3-204ENST00000369462 CCNJLQ8IV13 435 aa10.99□□□□□ -0.65
BRCC3-204ENST00000369462 PHF6Q8IWS0 365 aaKnown RBP eCLIP10.99□□□□□ -0.65
BRCC3-204ENST00000369462 SYNPOQ8N3V7 929 aa10.99□□□□□ -0.65
BRCC3-204ENST00000369462 MREGQ8N565 214 aa10.99□□□□□ -0.65
BRCC3-204ENST00000369462 TTC25Q96NG3 672 aa10.99□□□□□ -0.65
BRCC3-204ENST00000369462 EPB41L4BQ9H329 900 aa10.99□□□□□ -0.65
BRCC3-204ENST00000369462 PLAC1Q9HBJ0 212 aa10.99□□□□□ -0.65
BRCC3-204ENST00000369462 MAGEE1Q9HCI5 957 aa10.99□□□□□ -0.65
BRCC3-204ENST00000369462 KCTD3Q9Y597 815 aa10.99□□□□□ -0.65
BRCC3-204ENST00000369462 BPTFQ12830 3046 aa10.98□□□□□ -0.65
BRCC3-204ENST00000369462 C1orf232A0A0U1RR37 186 aa10.98□□□□□ -0.65
BRCC3-204ENST00000369462 FAM237BA0A1B0GVD1 139 aa10.98□□□□□ -0.65
BRCC3-204ENST00000369462 TSPAN11A1L157 253 aa10.98□□□□□ -0.65
BRCC3-204ENST00000369462 NPIPB15A6NHN6 443 aaPredicted RBP10.98□□□□□ -0.65
BRCC3-204ENST00000369462 UPK3BL1B0FP48 263 aa10.98□□□□□ -0.65
BRCC3-204ENST00000369462 UPK3BL2E5RIL1 263 aa10.98□□□□□ -0.65
BRCC3-204ENST00000369462 LDB2O43679 373 aa10.98□□□□□ -0.65
BRCC3-204ENST00000369462 NMBRP28336 390 aa10.98□□□□□ -0.65
BRCC3-204ENST00000369462 GAS6Q14393 721 aa10.98□□□□□ -0.65
BRCC3-204ENST00000369462 PTPRCAPQ14761 206 aa10.98□□□□□ -0.65
BRCC3-204ENST00000369462 CRY1Q16526 586 aa10.98□□□□□ -0.65
BRCC3-204ENST00000369462 ZNF776Q68DI1 518 aaPredicted RBP10.98□□□□□ -0.65
BRCC3-204ENST00000369462 HCAR2Q8TDS4 363 aa10.98□□□□□ -0.65
BRCC3-204ENST00000369462 ZNF669Q96BR6 464 aaPredicted RBP10.98□□□□□ -0.65
BRCC3-204ENST00000369462 FCRL3Q96P31 734 aaPredicted RBP10.98□□□□□ -0.65
BRCC3-204ENST00000369462 GPR63Q9BZJ6 419 aa10.98□□□□□ -0.65
BRCC3-204ENST00000369462 CD248Q9HCU0 757 aa10.98□□□□□ -0.65
BRCC3-204ENST00000369462 PCDH12Q9NPG4 1184 aa10.98□□□□□ -0.65
BRCC3-204ENST00000369462 HACD3Q9P035 362 aa10.98□□□□□ -0.65
BRCC3-204ENST00000369462 SLC2A6Q9UGQ3 507 aa10.98□□□□□ -0.65
BRCC3-204ENST00000369462 PPIL1Q9Y3C6 166 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 98.2 ms