RNA–Protein interactions for RNA: ENST00000360093.7

SCN3A-202, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN3A, Length 9,123 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-202ENST00000360093 ZNF229Q9UJW7 825 aa4.88□□□□□ -1.63
SCN3A-202ENST00000360093 C2CD4BA6NLJ0 364 aa4.88□□□□□ -1.63
SCN3A-202ENST00000360093 INPP4BO15327 924 aa4.88□□□□□ -1.63
SCN3A-202ENST00000360093 PHGDHO43175 533 aaKnown RBP4.88□□□□□ -1.63
SCN3A-202ENST00000360093 SPAM1P38567 509 aa4.88□□□□□ -1.63
SCN3A-202ENST00000360093 DAOAP59103 153 aa4.88□□□□□ -1.63
SCN3A-202ENST00000360093 GAD2Q05329 585 aa4.88□□□□□ -1.63
SCN3A-202ENST00000360093 AADACL2Q6P093 401 aa4.88□□□□□ -1.63
SCN3A-202ENST00000360093 NET1Q7Z628 596 aaPredicted RBP4.88□□□□□ -1.63
SCN3A-202ENST00000360093 SRFBP1Q8NEF9 429 aaKnown RBP4.88□□□□□ -1.63
SCN3A-202ENST00000360093 BRI3BPQ8WY22 251 aa4.88□□□□□ -1.63
SCN3A-202ENST00000360093 SMG7Q92540 1137 aaKnown RBP4.88□□□□□ -1.63
SCN3A-202ENST00000360093 SPACA7Q96KW9 195 aa4.88□□□□□ -1.63
SCN3A-202ENST00000360093 ZNF599Q96NL3 588 aa4.88□□□□□ -1.63
SCN3A-202ENST00000360093 EPB41L4BQ9H329 900 aa4.88□□□□□ -1.63
SCN3A-202ENST00000360093 PIH1D1Q9NWS0 290 aaKnown RBP4.88□□□□□ -1.63
SCN3A-202ENST00000360093 FZD10Q9ULW2 581 aa4.88□□□□□ -1.63
SCN3A-202ENST00000360093 VPS4AQ9UN37 437 aa4.88□□□□□ -1.63
SCN3A-202ENST00000360093 GPSM3Q9Y4H4 160 aa4.88□□□□□ -1.63
SCN3A-202ENST00000360093 INSL6Q9Y581 213 aa4.88□□□□□ -1.63
SCN3A-202ENST00000360093 ITGB4P16144 1822 aa4.88□□□□□ -1.63
SCN3A-202ENST00000360093 TPST1O60507 370 aa4.88□□□□□ -1.63
SCN3A-202ENST00000360093 MYBL2P10244 700 aa4.88□□□□□ -1.63
SCN3A-202ENST00000360093 KCNE1P15382 129 aa4.88□□□□□ -1.63
SCN3A-202ENST00000360093 TCF3P15923 654 aa4.88□□□□□ -1.63
SCN3A-202ENST00000360093 PAICSP22234 425 aaKnown RBP4.88□□□□□ -1.63
SCN3A-202ENST00000360093 COPZ1P61923 177 aa4.88□□□□□ -1.63
SCN3A-202ENST00000360093 PRKG2Q13237 762 aa4.88□□□□□ -1.63
SCN3A-202ENST00000360093 TSNQ15631 228 aaKnown RBP4.88□□□□□ -1.63
SCN3A-202ENST00000360093 ZNF792Q3KQV3 632 aa4.88□□□□□ -1.63
SCN3A-202ENST00000360093 RALGPS1Q5JS13 557 aa4.88□□□□□ -1.63
SCN3A-202ENST00000360093 TRIM40Q6P9F5 258 aa4.88□□□□□ -1.63
SCN3A-202ENST00000360093 CHSY3Q70JA7 882 aa4.88□□□□□ -1.63
SCN3A-202ENST00000360093 PHYKPLQ8IUZ5 450 aa4.88□□□□□ -1.63
SCN3A-202ENST00000360093 JOSD2Q8TAC2 188 aa4.88□□□□□ -1.63
SCN3A-202ENST00000360093 ZNF384Q8TF68 577 aa4.88□□□□□ -1.63
SCN3A-202ENST00000360093 FIG4Q92562 907 aa4.88□□□□□ -1.63
SCN3A-202ENST00000360093 PRCCQ92733 491 aaPredicted RBP4.88□□□□□ -1.63
SCN3A-202ENST00000360093 SUSD3Q96L08 255 aa4.88□□□□□ -1.63
SCN3A-202ENST00000360093 C11orf49Q9H6J7 331 aa4.88□□□□□ -1.63
SCN3A-202ENST00000360093 EXOSC4Q9NPD3 245 aaKnown RBP4.88□□□□□ -1.63
SCN3A-202ENST00000360093 SEMA4BQ9NPR2 832 aaPredicted RBP4.88□□□□□ -1.63
SCN3A-202ENST00000360093 SNX15Q9NRS6 342 aa4.88□□□□□ -1.63
SCN3A-202ENST00000360093 MRPS33Q9Y291 106 aaKnown RBP4.88□□□□□ -1.63
SCN3A-202ENST00000360093 NT5C1B-RDH14C9J2C7 533 aa4.88□□□□□ -1.63
SCN3A-202ENST00000360093 HNRNPH1P31943 449 aaKnown RBP4.88□□□□□ -1.63
SCN3A-202ENST00000360093 GPD2P43304 727 aa4.88□□□□□ -1.63
SCN3A-202ENST00000360093 PLIN5Q00G26 463 aa4.88□□□□□ -1.63
SCN3A-202ENST00000360093 CHMP1BQ7LBR1 199 aa4.88□□□□□ -1.63
SCN3A-202ENST00000360093 FAM228AQ86W67 206 aa4.88□□□□□ -1.63
SCN3A-202ENST00000360093 PROSER1Q86XN7 944 aa4.88□□□□□ -1.63
SCN3A-202ENST00000360093 DQX1Q8TE96 717 aaKnown RBP4.88□□□□□ -1.63
SCN3A-202ENST00000360093 SLC44A1Q8WWI5 657 aa4.88□□□□□ -1.63
SCN3A-202ENST00000360093 USP6NLQ92738 828 aa4.88□□□□□ -1.63
SCN3A-202ENST00000360093 ACDQ96AP0 544 aa4.88□□□□□ -1.63
SCN3A-202ENST00000360093 KCTD15Q96SI1 283 aaPredicted RBP4.88□□□□□ -1.63
SCN3A-202ENST00000360093 CAPN10Q9HC96 672 aa4.88□□□□□ -1.63
SCN3A-202ENST00000360093 USE1Q9NZ43 259 aa4.88□□□□□ -1.63
SCN3A-202ENST00000360093 INSIG1O15503 277 aa4.87□□□□□ -1.63
SCN3A-202ENST00000360093 SNX3O60493 162 aa4.87□□□□□ -1.63
SCN3A-202ENST00000360093 ATG7O95352 703 aa4.87□□□□□ -1.63
SCN3A-202ENST00000360093 ASPAP45381 313 aa4.87□□□□□ -1.63
SCN3A-202ENST00000360093 ASMTP46597 345 aa4.87□□□□□ -1.63
SCN3A-202ENST00000360093 C21orf59P57076 290 aa4.87□□□□□ -1.63
SCN3A-202ENST00000360093 FPGSQ05932 587 aa4.87□□□□□ -1.63
SCN3A-202ENST00000360093 TOP3AQ13472 1001 aaPredicted RBP4.87□□□□□ -1.63
SCN3A-202ENST00000360093 RFTN2Q52LD8 501 aaPredicted RBP4.87□□□□□ -1.63
SCN3A-202ENST00000360093 XKR6Q5GH73 641 aa4.87□□□□□ -1.63
SCN3A-202ENST00000360093 RTL3Q8N8U3 475 aaKnown RBP4.87□□□□□ -1.63
SCN3A-202ENST00000360093 FBXL18Q96ME1 805 aa4.87□□□□□ -1.63
SCN3A-202ENST00000360093 REEP1Q9H902 201 aa4.87□□□□□ -1.63
SCN3A-202ENST00000360093 SSU72Q9NP77 194 aaKnown RBP4.87□□□□□ -1.63
SCN3A-202ENST00000360093 DUS2Q9NX74 493 aaKnown RBP4.87□□□□□ -1.63
SCN3A-202ENST00000360093 LIMD1Q9UGP4 676 aa4.87□□□□□ -1.63
SCN3A-202ENST00000360093 ANGPT4Q9Y264 503 aa4.87□□□□□ -1.63
SCN3A-202ENST00000360093 PCDHGB3Q9Y5G1 929 aa4.87□□□□□ -1.63
SCN3A-202ENST00000360093 GLYATL1P3A0A0U1RQE8 302 aa4.87□□□□□ -1.63
SCN3A-202ENST00000360093 RCCD1A6NED2 376 aa4.87□□□□□ -1.63
SCN3A-202ENST00000360093 SLC38A8A6NNN8 435 aa4.87□□□□□ -1.63
SCN3A-202ENST00000360093 SPTLC1O15269 473 aa4.87□□□□□ -1.63
SCN3A-202ENST00000360093 ABCB1P08183 1280 aaPredicted RBP4.87□□□□□ -1.63
SCN3A-202ENST00000360093 UNGP13051 313 aaPredicted RBP4.87□□□□□ -1.63
SCN3A-202ENST00000360093 MARCKSL1P49006 195 aa4.87□□□□□ -1.63
SCN3A-202ENST00000360093 ZNF33AQ06730 810 aa4.87□□□□□ -1.63
SCN3A-202ENST00000360093 TNK2Q07912 1038 aa4.87□□□□□ -1.63
SCN3A-202ENST00000360093 CBX2Q14781 532 aaPredicted RBP4.87□□□□□ -1.63
SCN3A-202ENST00000360093 OR6Y1Q8NGX8 325 aa4.87□□□□□ -1.63
SCN3A-202ENST00000360093 BRSK1Q8TDC3 778 aa4.87□□□□□ -1.63
SCN3A-202ENST00000360093 LINGO1Q96FE5 620 aa4.87□□□□□ -1.63
SCN3A-202ENST00000360093 ITCHQ96J02 903 aa4.87□□□□□ -1.63
SCN3A-202ENST00000360093 HOPXQ9BPY8 73 aaPredicted RBP4.87□□□□□ -1.63
SCN3A-202ENST00000360093 B3GNT5Q9BYG0 378 aa4.87□□□□□ -1.63
SCN3A-202ENST00000360093 PCBD2Q9H0N5 130 aa4.87□□□□□ -1.63
SCN3A-202ENST00000360093 MUC13Q9H3R2 512 aa4.87□□□□□ -1.63
SCN3A-202ENST00000360093 XPNPEP1Q9NQW7 623 aa4.87□□□□□ -1.63
SCN3A-202ENST00000360093 GDAP2Q9NXN4 497 aa4.87□□□□□ -1.63
SCN3A-202ENST00000360093 NOCTQ9UK39 431 aaKnown RBP4.87□□□□□ -1.63
SCN3A-202ENST00000360093 IPO13O94829 963 aaKnown RBP4.87□□□□□ -1.63
SCN3A-202ENST00000360093 TNFAIP8O95379 198 aa4.87□□□□□ -1.63
SCN3A-202ENST00000360093 FAM58BPP0C7Q3 252 aa4.87□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms