RNA–Protein interactions for RNA: ENST00000334690.10

TRAPPC11-201, Transcript of trafficking protein particle complex 11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC11, Length 4,552 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-201ENST00000334690 ARMC4Q5T2S8 1044 aa17.15■□□□□ 0.34
TRAPPC11-201ENST00000334690 BROXQ5VW32 411 aa17.15■□□□□ 0.34
TRAPPC11-201ENST00000334690 TYW3Q6IPR3 259 aaKnown RBP17.15■□□□□ 0.34
TRAPPC11-201ENST00000334690 SPESP1Q6UW49 350 aa17.15■□□□□ 0.34
TRAPPC11-201ENST00000334690 ARHGAP22Q7Z5H3 698 aa17.15■□□□□ 0.34
TRAPPC11-201ENST00000334690 BANPQ8N9N5 519 aa17.15■□□□□ 0.34
TRAPPC11-201ENST00000334690 PCDH19Q8TAB3 1148 aa17.15■□□□□ 0.34
TRAPPC11-201ENST00000334690 EXOC2Q96KP1 924 aa17.15■□□□□ 0.34
TRAPPC11-201ENST00000334690 C1orf50Q9BV19 199 aa17.15■□□□□ 0.34
TRAPPC11-201ENST00000334690 CAPN10Q9HC96 672 aa17.15■□□□□ 0.34
TRAPPC11-201ENST00000334690 CLIC5Q9NZA1 410 aa17.15■□□□□ 0.34
TRAPPC11-201ENST00000334690 ADAM30Q9UKF2 790 aa17.15■□□□□ 0.34
TRAPPC11-201ENST00000334690 PCDHB9Q9Y5E1 797 aa17.15■□□□□ 0.34
TRAPPC11-201ENST00000334690 ABCC6O95255 1503 aa17.15■□□□□ 0.34
TRAPPC11-201ENST00000334690 SOWAHBA6NEL2 793 aa17.15■□□□□ 0.34
TRAPPC11-201ENST00000334690 SGTAO43765 313 aa17.15■□□□□ 0.34
TRAPPC11-201ENST00000334690 UQCRBP14927 111 aa17.15■□□□□ 0.34
TRAPPC11-201ENST00000334690 CREB1P16220 341 aa17.15■□□□□ 0.34
TRAPPC11-201ENST00000334690 RHOQP17081 205 aa17.15■□□□□ 0.34
TRAPPC11-201ENST00000334690 USP41Q3LFD5 358 aa17.15■□□□□ 0.34
TRAPPC11-201ENST00000334690 PARP15Q460N3 678 aa17.15■□□□□ 0.34
TRAPPC11-201ENST00000334690 FGD3Q5JSP0 725 aa17.15■□□□□ 0.34
TRAPPC11-201ENST00000334690 BNIPLQ7Z465 357 aa17.15■□□□□ 0.34
TRAPPC11-201ENST00000334690 GPR180Q86V85 440 aa17.15■□□□□ 0.34
TRAPPC11-201ENST00000334690 TRAPPC5Q8IUR0 188 aa17.15■□□□□ 0.34
TRAPPC11-201ENST00000334690 AGO3Q9H9G7 860 aaKnown RBP17.15■□□□□ 0.34
TRAPPC11-201ENST00000334690 S100A14Q9HCY8 104 aa17.15■□□□□ 0.34
TRAPPC11-201ENST00000334690 MRPL17Q9NRX2 175 aaKnown RBP17.15■□□□□ 0.34
TRAPPC11-201ENST00000334690 FFAR3O14843 346 aa17.15■□□□□ 0.34
TRAPPC11-201ENST00000334690 GPR42O15529 346 aa17.15■□□□□ 0.34
TRAPPC11-201ENST00000334690 CLDN11O75508 207 aa17.15■□□□□ 0.34
TRAPPC11-201ENST00000334690 GRK4P32298 578 aa17.15■□□□□ 0.34
TRAPPC11-201ENST00000334690 LILRA4P59901 499 aa17.15■□□□□ 0.34
TRAPPC11-201ENST00000334690 TAF5Q15542 800 aa17.15■□□□□ 0.34
TRAPPC11-201ENST00000334690 PHKG1Q16816 387 aa17.15■□□□□ 0.34
TRAPPC11-201ENST00000334690 SPANXN2Q5MJ10 180 aa17.15■□□□□ 0.34
TRAPPC11-201ENST00000334690 AMIGO2Q86SJ2 522 aa17.15■□□□□ 0.34
TRAPPC11-201ENST00000334690 OR8H2Q8N162 312 aa17.15■□□□□ 0.34
TRAPPC11-201ENST00000334690 ZNF567Q8N184 647 aa17.15■□□□□ 0.34
TRAPPC11-201ENST00000334690 DENND2DQ9H6A0 471 aaPredicted RBP17.15■□□□□ 0.34
TRAPPC11-201ENST00000334690 TMEM39AQ9NV64 488 aa17.15■□□□□ 0.34
TRAPPC11-201ENST00000334690 THG1LQ9NWX6 298 aaKnown RBP17.15■□□□□ 0.34
TRAPPC11-201ENST00000334690 COPG1Q9Y678 874 aaKnown RBP17.15■□□□□ 0.34
TRAPPC11-201ENST00000334690 GUCY1B2O75343 617 aa17.14■□□□□ 0.34
TRAPPC11-201ENST00000334690 INAQ16352 499 aa17.14■□□□□ 0.34
TRAPPC11-201ENST00000334690 RFX4Q33E94 735 aa17.14■□□□□ 0.34
TRAPPC11-201ENST00000334690 FBXL19Q6PCT2 694 aa17.14■□□□□ 0.34
TRAPPC11-201ENST00000334690 KRT73Q86Y46 540 aa17.14■□□□□ 0.34
TRAPPC11-201ENST00000334690 CMASQ8NFW8 434 aaPredicted RBP17.14■□□□□ 0.34
TRAPPC11-201ENST00000334690 ELMO1Q92556 727 aa17.14■□□□□ 0.34
TRAPPC11-201ENST00000334690 LINGO1Q96FE5 620 aa17.14■□□□□ 0.34
TRAPPC11-201ENST00000334690 BBS4Q96RK4 519 aa17.14■□□□□ 0.34
TRAPPC11-201ENST00000334690 COPS8Q99627 209 aa17.14■□□□□ 0.34
TRAPPC11-201ENST00000334690 ZDHHC6Q9H6R6 413 aa17.14■□□□□ 0.34
TRAPPC11-201ENST00000334690 ZFP14Q9HCL3 533 aa17.14■□□□□ 0.34
TRAPPC11-201ENST00000334690 EIF2B3Q9NR50 452 aaKnown RBP17.14■□□□□ 0.34
TRAPPC11-201ENST00000334690 DAPK2Q9UIK4 370 aa17.14■□□□□ 0.34
TRAPPC11-201ENST00000334690 DYRK3O43781 588 aa17.14■□□□□ 0.33
TRAPPC11-201ENST00000334690 LRIG2O94898 1065 aa17.14■□□□□ 0.33
TRAPPC11-201ENST00000334690 VNN1O95497 513 aa17.14■□□□□ 0.33
TRAPPC11-201ENST00000334690 RPL3P39023 403 aaKnown RBP17.14■□□□□ 0.33
TRAPPC11-201ENST00000334690 TSNQ15631 228 aaKnown RBP17.14■□□□□ 0.33
TRAPPC11-201ENST00000334690 ARL13AQ5H913 290 aaPredicted RBP17.14■□□□□ 0.33
TRAPPC11-201ENST00000334690 SDHAF4Q5VUM1 108 aa17.14■□□□□ 0.33
TRAPPC11-201ENST00000334690 GCNT7Q6ZNI0 430 aa17.14■□□□□ 0.33
TRAPPC11-201ENST00000334690 C10orf53Q8N6V4 93 aa17.14■□□□□ 0.33
TRAPPC11-201ENST00000334690 CNTD1Q8N815 330 aa17.14■□□□□ 0.33
TRAPPC11-201ENST00000334690 MFSD3Q96ES6 412 aa17.14■□□□□ 0.33
TRAPPC11-201ENST00000334690 SLC27A5Q9Y2P5 690 aa17.14■□□□□ 0.33
TRAPPC11-201ENST00000334690 FOXO6A8MYZ6 492 aa17.14■□□□□ 0.33
TRAPPC11-201ENST00000334690 PRMT5O14744 637 aaPredicted RBP17.14■□□□□ 0.33
TRAPPC11-201ENST00000334690 MGRN1O60291 552 aa17.14■□□□□ 0.33
TRAPPC11-201ENST00000334690 SLC22A3O75751 556 aa17.14■□□□□ 0.33
TRAPPC11-201ENST00000334690 ADARP55265 1226 aaKnown RBP17.14■□□□□ 0.33
TRAPPC11-201ENST00000334690 SGCGQ13326 291 aa17.14■□□□□ 0.33
TRAPPC11-201ENST00000334690 PLCL1Q15111 1095 aa17.14■□□□□ 0.33
TRAPPC11-201ENST00000334690 LINC00854A0A1B0GVQ3 168 aa17.14■□□□□ 0.33
TRAPPC11-201ENST00000334690 USP2O75604 605 aaPredicted RBP17.14■□□□□ 0.33
TRAPPC11-201ENST00000334690 NTRK1P04629 796 aa17.14■□□□□ 0.33
TRAPPC11-201ENST00000334690 CLTBP09497 229 aa17.14■□□□□ 0.33
TRAPPC11-201ENST00000334690 IFNGR2P38484 337 aa17.14■□□□□ 0.33
TRAPPC11-201ENST00000334690 GPD2P43304 727 aa17.14■□□□□ 0.33
TRAPPC11-201ENST00000334690 GSSP48637 474 aa17.14■□□□□ 0.33
TRAPPC11-201ENST00000334690 SCIMPQ6UWF3 145 aa17.14■□□□□ 0.33
TRAPPC11-201ENST00000334690 ISLR2Q6UXK2 745 aa17.14■□□□□ 0.33
TRAPPC11-201ENST00000334690 DGCR6LQ9BY27 220 aa17.14■□□□□ 0.33
TRAPPC11-201ENST00000334690 EPB41L4BQ9H329 900 aa17.14■□□□□ 0.33
TRAPPC11-201ENST00000334690 C12orf65Q9H3J6 166 aaKnown RBP17.14■□□□□ 0.33
TRAPPC11-201ENST00000334690 POLR1BQ9H9Y6 1135 aa17.14■□□□□ 0.33
TRAPPC11-201ENST00000334690 BPIFA1Q9NP55 256 aa17.14■□□□□ 0.33
TRAPPC11-201ENST00000334690 C8orf4Q9NR00 106 aa17.14■□□□□ 0.33
TRAPPC11-201ENST00000334690 TRAV19A0A0A6YYK7 116 aa17.13■□□□□ 0.33
TRAPPC11-201ENST00000334690 ATP1A4Q13733 1029 aa17.13■□□□□ 0.33
TRAPPC11-201ENST00000334690 GALNT3Q14435 633 aa17.13■□□□□ 0.33
TRAPPC11-201ENST00000334690 TIGD2Q4W5G0 525 aa17.13■□□□□ 0.33
TRAPPC11-201ENST00000334690 HECTD2Q5U5R9 776 aa17.13■□□□□ 0.33
TRAPPC11-201ENST00000334690 TBC1D21Q8IYX1 336 aa17.13■□□□□ 0.33
TRAPPC11-201ENST00000334690 ANKDD1BA6NHY2 528 aa17.13■□□□□ 0.33
TRAPPC11-201ENST00000334690 DHX15O43143 795 aaKnown RBP17.13■□□□□ 0.33
TRAPPC11-201ENST00000334690 TBL1XO60907 577 aa17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms