RNA–Protein interactions for RNA: ENST00000612369.4

VCX3A-203, Transcript of variable charge X-linked 3A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VCX3A, Length 812 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3A-203ENST00000612369 GOLGA4Q13439 2230 aaKnown RBP18.34■□□□□ 0.53
VCX3A-203ENST00000612369 TMEM110-MUSTN1A8MSY1 372 aa18.34■□□□□ 0.53
VCX3A-203ENST00000612369 TRAFD1O14545 582 aaPredicted RBP18.34■□□□□ 0.53
VCX3A-203ENST00000612369 MUSKO15146 869 aa18.34■□□□□ 0.53
VCX3A-203ENST00000612369 PEX11BO96011 259 aa18.34■□□□□ 0.53
VCX3A-203ENST00000612369 CKMT1AP12532 417 aa18.34■□□□□ 0.53
VCX3A-203ENST00000612369 C6P13671 934 aa18.34■□□□□ 0.53
VCX3A-203ENST00000612369 JUPP14923 745 aa18.34■□□□□ 0.53
VCX3A-203ENST00000612369 JUNDP17535 347 aa18.34■□□□□ 0.53
VCX3A-203ENST00000612369 IL4RP24394 825 aa18.34■□□□□ 0.53
VCX3A-203ENST00000612369 LIG3P49916 1009 aa18.34■□□□□ 0.53
VCX3A-203ENST00000612369 DUSP3P51452 185 aaPredicted RBP18.34■□□□□ 0.53
VCX3A-203ENST00000612369 CAMK2BQ13554 666 aa18.34■□□□□ 0.53
VCX3A-203ENST00000612369 PDK2Q15119 407 aa18.34■□□□□ 0.53
VCX3A-203ENST00000612369 MAP7D3Q8IWC1 876 aa18.34■□□□□ 0.53
VCX3A-203ENST00000612369 PDCD7Q8N8D1 485 aaKnown RBP18.34■□□□□ 0.53
VCX3A-203ENST00000612369 ZNF548Q8NEK5 533 aaPredicted RBP18.34■□□□□ 0.53
VCX3A-203ENST00000612369 RFFLQ8WZ73 363 aa18.34■□□□□ 0.53
VCX3A-203ENST00000612369 MBNL1Q9NR56 388 aaKnown RBP18.34■□□□□ 0.53
VCX3A-203ENST00000612369 NCKIPSDQ9NZQ3 722 aa18.34■□□□□ 0.53
VCX3A-203ENST00000612369 SPASTQ9UBP0 616 aa18.34■□□□□ 0.53
VCX3A-203ENST00000612369 SRRM3A6NNA2 597 aaPredicted RBP18.33■□□□□ 0.52
VCX3A-203ENST00000612369 TPP1O14773 563 aa18.33■□□□□ 0.52
VCX3A-203ENST00000612369 FFAR2O15552 330 aa18.33■□□□□ 0.52
VCX3A-203ENST00000612369 AQP9O43315 295 aa18.33■□□□□ 0.52
VCX3A-203ENST00000612369 AKR1B10O60218 316 aa18.33■□□□□ 0.52
VCX3A-203ENST00000612369 LZTS3O60299 673 aaPredicted RBP18.33■□□□□ 0.52
VCX3A-203ENST00000612369 SOCS5O75159 536 aa18.33■□□□□ 0.52
VCX3A-203ENST00000612369 KRT7P08729 469 aa18.33■□□□□ 0.52
VCX3A-203ENST00000612369 TMEM253P0C7T8 217 aa18.33■□□□□ 0.52
VCX3A-203ENST00000612369 CR2P20023 1033 aa18.33■□□□□ 0.52
VCX3A-203ENST00000612369 NFKBIAP25963 317 aa18.33■□□□□ 0.52
VCX3A-203ENST00000612369 MAN1A1P33908 653 aa18.33■□□□□ 0.52
VCX3A-203ENST00000612369 ARSEP51690 589 aa18.33■□□□□ 0.52
VCX3A-203ENST00000612369 EIF2B5Q13144 721 aaKnown RBP18.33■□□□□ 0.52
VCX3A-203ENST00000612369 TPRG1LQ5T0D9 272 aa18.33■□□□□ 0.52
VCX3A-203ENST00000612369 MARC1Q5VT66 337 aa18.33■□□□□ 0.52
VCX3A-203ENST00000612369 MACC1Q6ZN28 852 aa18.33■□□□□ 0.52
VCX3A-203ENST00000612369 ZSWIM9Q86XI8 627 aa18.33■□□□□ 0.52
VCX3A-203ENST00000612369 PAF1Q8N7H5 531 aa18.33■□□□□ 0.52
VCX3A-203ENST00000612369 NUDCD1Q96RS6 583 aa18.33■□□□□ 0.52
VCX3A-203ENST00000612369 ZNF670Q9BS34 389 aa18.33■□□□□ 0.52
VCX3A-203ENST00000612369 ABHD10Q9NUJ1 306 aa18.33■□□□□ 0.52
VCX3A-203ENST00000612369 ANKRD36A6QL64 1941 aa18.33■□□□□ 0.52
VCX3A-203ENST00000612369 DMXL2Q8TDJ6 3036 aa18.32■□□□□ 0.52
VCX3A-203ENST00000612369 FAM149AA5PLN7 773 aa18.32■□□□□ 0.52
VCX3A-203ENST00000612369 TRABD2BA6NFA1 517 aa18.32■□□□□ 0.52
VCX3A-203ENST00000612369 K7ESM1 405 aa18.32■□□□□ 0.52
VCX3A-203ENST00000612369 BLKP51451 505 aa18.32■□□□□ 0.52
VCX3A-203ENST00000612369 DPYSL3Q14195 570 aa18.32■□□□□ 0.52
VCX3A-203ENST00000612369 IRF4Q15306 451 aa18.32■□□□□ 0.52
VCX3A-203ENST00000612369 WSCD2Q2TBF2 565 aa18.32■□□□□ 0.52
VCX3A-203ENST00000612369 ZCCHC8Q6NZY4 707 aaKnown RBP18.32■□□□□ 0.52
VCX3A-203ENST00000612369 DPPA4Q7L190 304 aa18.32■□□□□ 0.52
VCX3A-203ENST00000612369 KCTD6Q8NC69 237 aa18.32■□□□□ 0.52
VCX3A-203ENST00000612369 ATL2Q8NHH9 583 aa18.32■□□□□ 0.52
VCX3A-203ENST00000612369 APOLD1Q96LR9 279 aa18.32■□□□□ 0.52
VCX3A-203ENST00000612369 CCDC42Q96M95 316 aa18.32■□□□□ 0.52
VCX3A-203ENST00000612369 MGME1Q9BQP7 344 aa18.32■□□□□ 0.52
VCX3A-203ENST00000612369 PACSIN1Q9BY11 444 aa18.32■□□□□ 0.52
VCX3A-203ENST00000612369 KLF15Q9UIH9 416 aa18.32■□□□□ 0.52
VCX3A-203ENST00000612369 SALL4Q9UJQ4 1053 aa18.32■□□□□ 0.52
VCX3A-203ENST00000612369 COQ6Q9Y2Z9 468 aa18.32■□□□□ 0.52
VCX3A-203ENST00000612369 FREM2Q5SZK8 3169 aa18.32■□□□□ 0.52
VCX3A-203ENST00000612369 HTRA2O43464 458 aaPredicted RBP18.31■□□□□ 0.52
VCX3A-203ENST00000612369 MFAP3LO75121 409 aa18.31■□□□□ 0.52
VCX3A-203ENST00000612369 GP1BAP07359 652 aa18.31■□□□□ 0.52
VCX3A-203ENST00000612369 CD48P09326 243 aa18.31■□□□□ 0.52
VCX3A-203ENST00000612369 HTR1BP28222 390 aa18.31■□□□□ 0.52
VCX3A-203ENST00000612369 MMP13P45452 471 aa18.31■□□□□ 0.52
VCX3A-203ENST00000612369 MTM1Q13496 603 aa18.31■□□□□ 0.52
VCX3A-203ENST00000612369 PAFAH1B3Q15102 231 aaKnown RBP18.31■□□□□ 0.52
VCX3A-203ENST00000612369 HES3Q5TGS1 186 aa18.31■□□□□ 0.52
VCX3A-203ENST00000612369 LIPIQ6XZB0 460 aa18.31■□□□□ 0.52
VCX3A-203ENST00000612369 CNGA4Q8IV77 575 aa18.31■□□□□ 0.52
VCX3A-203ENST00000612369 PHACTR4Q8IZ21 702 aa18.31■□□□□ 0.52
VCX3A-203ENST00000612369 RNF214Q8ND24 703 aa18.31■□□□□ 0.52
VCX3A-203ENST00000612369 LMX1AQ8TE12 382 aa18.31■□□□□ 0.52
VCX3A-203ENST00000612369 IL12RB2Q99665 862 aa18.31■□□□□ 0.52
VCX3A-203ENST00000612369 SLC13A1Q9BZW2 595 aa18.31■□□□□ 0.52
VCX3A-203ENST00000612369 SCUBE2Q9NQ36 999 aa18.31■□□□□ 0.52
VCX3A-203ENST00000612369 KCTD5Q9NXV2 234 aa18.31■□□□□ 0.52
VCX3A-203ENST00000612369 APOBEC3BQ9UH17 382 aaKnown RBP18.31■□□□□ 0.52
VCX3A-203ENST00000612369 ZZEF1O43149 2961 aa18.31■□□□□ 0.52
VCX3A-203ENST00000612369 LRRK1Q38SD2 2015 aa18.3■□□□□ 0.52
VCX3A-203ENST00000612369 TAF4O00268 1085 aa18.3■□□□□ 0.52
VCX3A-203ENST00000612369 NEBLO76041 1014 aa18.3■□□□□ 0.52
VCX3A-203ENST00000612369 ELFN1P0C7U0 828 aa18.3■□□□□ 0.52
VCX3A-203ENST00000612369 ARHGAP25P42331 645 aa18.3■□□□□ 0.52
VCX3A-203ENST00000612369 PPARDQ03181 441 aa18.3■□□□□ 0.52
VCX3A-203ENST00000612369 RALGDSQ12967 914 aa18.3■□□□□ 0.52
VCX3A-203ENST00000612369 MMRN1Q13201 1228 aa18.3■□□□□ 0.52
VCX3A-203ENST00000612369 INPP5AQ14642 412 aa18.3■□□□□ 0.52
VCX3A-203ENST00000612369 ATP13A4Q4VNC1 1196 aa18.3■□□□□ 0.52
VCX3A-203ENST00000612369 ANKRD20A8PQ5CZ79 823 aa18.3■□□□□ 0.52
VCX3A-203ENST00000612369 FAXCQ5TGI0 409 aa18.3■□□□□ 0.52
VCX3A-203ENST00000612369 TIGD7Q6NT04 549 aaPredicted RBP18.3■□□□□ 0.52
VCX3A-203ENST00000612369 MARCH9Q86YJ5 346 aa18.3■□□□□ 0.52
VCX3A-203ENST00000612369 RHOT2Q8IXI1 618 aa18.3■□□□□ 0.52
VCX3A-203ENST00000612369 SDR16C5Q8N3Y7 309 aa18.3■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms