RNA–Protein interactions for RNA: ENST00000580540.1

SREBF1-219, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 4

Gene SREBF1, Length 540 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-219ENST00000580540 GALNT2Q10471 571 aa16.74■□□□□ 0.27
SREBF1-219ENST00000580540 FZD2Q14332 565 aa16.74■□□□□ 0.27
SREBF1-219ENST00000580540 LRRC14Q15048 493 aa16.74■□□□□ 0.27
SREBF1-219ENST00000580540 IRF4Q15306 451 aa16.74■□□□□ 0.27
SREBF1-219ENST00000580540 IFI16Q16666 785 aaKnown RBP16.74■□□□□ 0.27
SREBF1-219ENST00000580540 HS1BP3Q53T59 392 aa16.74■□□□□ 0.27
SREBF1-219ENST00000580540 TPRG1LQ5T0D9 272 aa16.74■□□□□ 0.27
SREBF1-219ENST00000580540 KANSL1Q7Z3B3 1105 aa16.74■□□□□ 0.27
SREBF1-219ENST00000580540 SLC25A45Q8N413 288 aa16.74■□□□□ 0.27
SREBF1-219ENST00000580540 PQLC3Q8N755 202 aa16.74■□□□□ 0.27
SREBF1-219ENST00000580540 TP53I13Q8NBR0 393 aaPredicted RBP16.74■□□□□ 0.27
SREBF1-219ENST00000580540 CCNYQ8ND76 341 aa16.74■□□□□ 0.27
SREBF1-219ENST00000580540 ECHDC3Q96DC8 303 aa16.74■□□□□ 0.27
SREBF1-219ENST00000580540 MRFAP1L1Q96HT8 127 aa16.74■□□□□ 0.27
SREBF1-219ENST00000580540 TFR2Q9UP52 801 aa16.74■□□□□ 0.27
SREBF1-219ENST00000580540 NEUROG3Q9Y4Z2 214 aa16.74■□□□□ 0.27
SREBF1-219ENST00000580540 ANKRD36A6QL64 1941 aa16.74■□□□□ 0.27
SREBF1-219ENST00000580540 CHD8Q9HCK8 2581 aa16.74■□□□□ 0.27
SREBF1-219ENST00000580540 SPTY2D1-AS1A0A0U1RR47 76 aa16.73■□□□□ 0.27
SREBF1-219ENST00000580540 C1QTNF9BB2RNN3 333 aa16.73■□□□□ 0.27
SREBF1-219ENST00000580540 TRAFD1O14545 582 aaPredicted RBP16.73■□□□□ 0.27
SREBF1-219ENST00000580540 PIAS2O75928 621 aa16.73■□□□□ 0.27
SREBF1-219ENST00000580540 C1QTNF9P0C862 333 aa16.73■□□□□ 0.27
SREBF1-219ENST00000580540 COMTP21964 271 aa16.73■□□□□ 0.27
SREBF1-219ENST00000580540 CYLC1P35663 651 aaPredicted RBP16.73■□□□□ 0.27
SREBF1-219ENST00000580540 MMP12P39900 470 aa16.73■□□□□ 0.27
SREBF1-219ENST00000580540 PFN3P60673 137 aa16.73■□□□□ 0.27
SREBF1-219ENST00000580540 PTK2BQ14289 1009 aa16.73■□□□□ 0.27
SREBF1-219ENST00000580540 TIGD7Q6NT04 549 aaPredicted RBP16.73■□□□□ 0.27
SREBF1-219ENST00000580540 PARGQ86W56 976 aa16.73■□□□□ 0.27
SREBF1-219ENST00000580540 RNF25Q96BH1 459 aaPredicted RBP16.73■□□□□ 0.27
SREBF1-219ENST00000580540 FAF2Q96CS3 445 aa16.73■□□□□ 0.27
SREBF1-219ENST00000580540 ZNF830Q96NB3 372 aaPredicted RBP16.73■□□□□ 0.27
SREBF1-219ENST00000580540 RNF157Q96PX1 679 aa16.73■□□□□ 0.27
SREBF1-219ENST00000580540 SEMA3CQ99985 751 aa16.73■□□□□ 0.27
SREBF1-219ENST00000580540 MGME1Q9BQP7 344 aa16.73■□□□□ 0.27
SREBF1-219ENST00000580540 MSRB2Q9Y3D2 182 aa16.73■□□□□ 0.27
SREBF1-219ENST00000580540 PCDHA13Q9Y5I0 950 aa16.73■□□□□ 0.27
SREBF1-219ENST00000580540 HEY1Q9Y5J3 304 aa16.73■□□□□ 0.27
SREBF1-219ENST00000580540 H3BM21 787 aa16.72■□□□□ 0.27
SREBF1-219ENST00000580540 TRIM38O00635 465 aa16.72■□□□□ 0.27
SREBF1-219ENST00000580540 SIGLEC6O43699 453 aa16.72■□□□□ 0.27
SREBF1-219ENST00000580540 CPP00450 1065 aa16.72■□□□□ 0.27
SREBF1-219ENST00000580540 PCCBP05166 539 aa16.72■□□□□ 0.27
SREBF1-219ENST00000580540 ELFN1P0C7U0 828 aa16.72■□□□□ 0.27
SREBF1-219ENST00000580540 JUNDP17535 347 aa16.72■□□□□ 0.27
SREBF1-219ENST00000580540 CR2P20023 1033 aa16.72■□□□□ 0.27
SREBF1-219ENST00000580540 MX2P20592 715 aa16.72■□□□□ 0.27
SREBF1-219ENST00000580540 CCNCP24863 283 aa16.72■□□□□ 0.27
SREBF1-219ENST00000580540 SLC1A1P43005 524 aa16.72■□□□□ 0.27
SREBF1-219ENST00000580540 HNRNPKP61978 463 aaKnown RBP eCLIP16.72■□□□□ 0.275e-10■■■□□ 17.9
SREBF1-219ENST00000580540 SLC10A2Q12908 348 aaPredicted RBP16.72■□□□□ 0.27
SREBF1-219ENST00000580540 TRAF2Q12933 501 aa16.72■□□□□ 0.27
SREBF1-219ENST00000580540 WSCD2Q2TBF2 565 aa16.72■□□□□ 0.27
SREBF1-219ENST00000580540 DENND2CQ68D51 928 aa16.72■□□□□ 0.27
SREBF1-219ENST00000580540 DHRS13Q6UX07 377 aa16.72■□□□□ 0.27
SREBF1-219ENST00000580540 UNQ6494/PRO21346Q6UXR6 183 aa16.72■□□□□ 0.27
SREBF1-219ENST00000580540 RFX6Q8HWS3 928 aa16.72■□□□□ 0.27
SREBF1-219ENST00000580540 RHOT1Q8IXI2 618 aa16.72■□□□□ 0.27
SREBF1-219ENST00000580540 CCDC170Q8IYT3 715 aa16.72■□□□□ 0.27
SREBF1-219ENST00000580540 IFT43Q96FT9 208 aa16.72■□□□□ 0.27
SREBF1-219ENST00000580540 LUC7LQ9NQ29 371 aaKnown RBP16.72■□□□□ 0.27
SREBF1-219ENST00000580540 GPR27Q9NS67 375 aa16.72■□□□□ 0.27
SREBF1-219ENST00000580540 RBM22Q9NW64 420 aaKnown RBP eCLIP16.72■□□□□ 0.274e-6■□□□□ 11.3
SREBF1-219ENST00000580540 NEMP2A6NFY4 417 aa16.71■□□□□ 0.27
SREBF1-219ENST00000580540 APOL1O14791 398 aa16.71■□□□□ 0.27
SREBF1-219ENST00000580540 MATN3O15232 486 aa16.71■□□□□ 0.27
SREBF1-219ENST00000580540 SOCS5O75159 536 aa16.71■□□□□ 0.27
SREBF1-219ENST00000580540 CSF2P04141 144 aa16.71■□□□□ 0.27
SREBF1-219ENST00000580540 YPEL5P62699 121 aa16.71■□□□□ 0.27
SREBF1-219ENST00000580540 DYNLT1P63172 113 aa16.71■□□□□ 0.27
SREBF1-219ENST00000580540 DAB2P98082 770 aa16.71■□□□□ 0.27
SREBF1-219ENST00000580540 RALGDSQ12967 914 aa16.71■□□□□ 0.27
SREBF1-219ENST00000580540 EIF2B5Q13144 721 aaKnown RBP16.71■□□□□ 0.27
SREBF1-219ENST00000580540 ACOX1Q15067 660 aa16.71■□□□□ 0.27
SREBF1-219ENST00000580540 ARMC12Q5T9G4 340 aa16.71■□□□□ 0.27
SREBF1-219ENST00000580540 FAXCQ5TGI0 409 aa16.71■□□□□ 0.27
SREBF1-219ENST00000580540 LIPIQ6XZB0 460 aa16.71■□□□□ 0.27
SREBF1-219ENST00000580540 DPPA4Q7L190 304 aa16.71■□□□□ 0.27
SREBF1-219ENST00000580540 MARCH9Q86YJ5 346 aa16.71■□□□□ 0.27
SREBF1-219ENST00000580540 CCDC13Q8IYE1 715 aa16.71■□□□□ 0.27
SREBF1-219ENST00000580540 TEX26Q8N6G2 289 aa16.71■□□□□ 0.27
SREBF1-219ENST00000580540 LMX1AQ8TE12 382 aa16.71■□□□□ 0.27
SREBF1-219ENST00000580540 PANX2Q96RD6 677 aa16.71■□□□□ 0.27
SREBF1-219ENST00000580540 POLR1EQ9GZS1 481 aaKnown RBP16.71■□□□□ 0.27
SREBF1-219ENST00000580540 GOLPH3Q9H4A6 298 aa16.71■□□□□ 0.27
SREBF1-219ENST00000580540 DDX56Q9NY93 547 aaKnown RBP16.71■□□□□ 0.27
SREBF1-219ENST00000580540 DTLQ9NZJ0 730 aa16.71■□□□□ 0.27
SREBF1-219ENST00000580540 B4GALT6Q9UBX8 382 aa16.71■□□□□ 0.27
SREBF1-219ENST00000580540 KLF15Q9UIH9 416 aa16.71■□□□□ 0.27
SREBF1-219ENST00000580540 RAI2Q9Y5P3 530 aa16.71■□□□□ 0.27
SREBF1-219ENST00000580540 EPN1Q9Y6I3 576 aaPredicted RBP16.71■□□□□ 0.27
SREBF1-219ENST00000580540 CEP295Q9C0D2 2601 aa16.71■□□□□ 0.27
SREBF1-219ENST00000580540 A0A1W2PQ67 120 aa16.7■□□□□ 0.26
SREBF1-219ENST00000580540 SOWAHDA6NJG2 315 aa16.7■□□□□ 0.26
SREBF1-219ENST00000580540 HTRA2O43464 458 aaPredicted RBP16.7■□□□□ 0.26
SREBF1-219ENST00000580540 RFPL3O75679 317 aa16.7■□□□□ 0.26
SREBF1-219ENST00000580540 RECQL5O94762 991 aaPredicted RBP16.7■□□□□ 0.26
SREBF1-219ENST00000580540 IPO7O95373 1038 aaKnown RBP16.7■□□□□ 0.26
SREBF1-219ENST00000580540 ALPPL2P10696 532 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms