RNA–Protein interactions for RNA: ENST00000577539.1

VAPA-203, Transcript of VAMP associated protein A, humanhuman

Gene VAPA, Length 3,760 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-203ENST00000577539 COG4Q9H9E3 785 aa5.42□□□□□ -1.54
VAPA-203ENST00000577539 NMRAL1Q9HBL8 299 aa5.42□□□□□ -1.54
VAPA-203ENST00000577539 MKS1Q9NXB0 559 aa5.42□□□□□ -1.54
VAPA-203ENST00000577539 ZNF212Q9UDV6 495 aa5.42□□□□□ -1.54
VAPA-203ENST00000577539 CORO1CQ9ULV4 474 aaPredicted RBP5.42□□□□□ -1.54
VAPA-203ENST00000577539 CDY2AQ9Y6F7 541 aa5.42□□□□□ -1.54
VAPA-203ENST00000577539 CDY1Q9Y6F8 540 aa5.42□□□□□ -1.54
VAPA-203ENST00000577539 C17orf102A2RUQ5 167 aa5.42□□□□□ -1.54
VAPA-203ENST00000577539 TRIM13O60858 407 aa5.42□□□□□ -1.54
VAPA-203ENST00000577539 ALDH1A2O94788 518 aa5.42□□□□□ -1.54
VAPA-203ENST00000577539 SORBS2O94875 1100 aaKnown RBP5.42□□□□□ -1.54
VAPA-203ENST00000577539 LRIG2O94898 1065 aa5.42□□□□□ -1.54
VAPA-203ENST00000577539 VAPBO95292 243 aa5.42□□□□□ -1.54
VAPA-203ENST00000577539 AP2A1O95782 977 aa5.42□□□□□ -1.54
VAPA-203ENST00000577539 IL1BP01584 269 aa5.42□□□□□ -1.54
VAPA-203ENST00000577539 PGRP06401 933 aa5.42□□□□□ -1.54
VAPA-203ENST00000577539 CHRNGP07510 517 aa5.42□□□□□ -1.54
VAPA-203ENST00000577539 NMBRP28336 390 aa5.42□□□□□ -1.54
VAPA-203ENST00000577539 AXLP30530 894 aa5.42□□□□□ -1.54
VAPA-203ENST00000577539 TUBP50607 506 aa5.42□□□□□ -1.54
VAPA-203ENST00000577539 SCNN1GP51170 649 aa5.42□□□□□ -1.54
VAPA-203ENST00000577539 NAGLUP54802 743 aa5.42□□□□□ -1.54
VAPA-203ENST00000577539 POLE2P56282 527 aa5.42□□□□□ -1.54
VAPA-203ENST00000577539 DAOAP59103 153 aa5.42□□□□□ -1.54
VAPA-203ENST00000577539 ZBTB17Q13105 803 aa5.42□□□□□ -1.54
VAPA-203ENST00000577539 PDCD2Q16342 344 aaPredicted RBP5.42□□□□□ -1.54
VAPA-203ENST00000577539 PCSK7Q16549 785 aa5.42□□□□□ -1.54
VAPA-203ENST00000577539 FSCBQ5H9T9 825 aa5.42□□□□□ -1.54
VAPA-203ENST00000577539 WIPI1Q5MNZ9 446 aaPredicted RBP5.42□□□□□ -1.54
VAPA-203ENST00000577539 VHLLQ6RSH7 139 aa5.42□□□□□ -1.54
VAPA-203ENST00000577539 PAQR9Q6ZVX9 377 aa5.42□□□□□ -1.54
VAPA-203ENST00000577539 TOP6BLQ8N6T0 577 aa5.42□□□□□ -1.54
VAPA-203ENST00000577539 NPWQ8N729 165 aa5.42□□□□□ -1.54
VAPA-203ENST00000577539 RNF148Q8N7C7 305 aa5.42□□□□□ -1.54
VAPA-203ENST00000577539 CMTM5Q96DZ9 223 aa5.42□□□□□ -1.54
VAPA-203ENST00000577539 GBP5Q96PP8 586 aa5.42□□□□□ -1.54
VAPA-203ENST00000577539 RBBP8Q99708 897 aa5.42□□□□□ -1.54
VAPA-203ENST00000577539 COLEC11Q9BWP8 271 aa5.42□□□□□ -1.54
VAPA-203ENST00000577539 NUF2Q9BZD4 464 aa5.42□□□□□ -1.54
VAPA-203ENST00000577539 KATNBL1Q9H079 304 aa5.42□□□□□ -1.54
VAPA-203ENST00000577539 SMG9Q9H0W8 520 aaKnown RBP5.42□□□□□ -1.54
VAPA-203ENST00000577539 IGSF9Q9P2J2 1179 aa5.42□□□□□ -1.54
VAPA-203ENST00000577539 RUVBL2Q9Y230 463 aaKnown RBP5.42□□□□□ -1.54
VAPA-203ENST00000577539 NUP205Q92621 2012 aa5.42□□□□□ -1.54
VAPA-203ENST00000577539 PTGESO14684 152 aa5.41□□□□□ -1.54
VAPA-203ENST00000577539 KATNA1O75449 491 aa5.41□□□□□ -1.54
VAPA-203ENST00000577539 PIGNO95427 931 aa5.41□□□□□ -1.54
VAPA-203ENST00000577539 MT-CYBP00156 380 aaPredicted RBP5.41□□□□□ -1.54
VAPA-203ENST00000577539 POMCP01189 267 aa5.41□□□□□ -1.54
VAPA-203ENST00000577539 THP07101 528 aa5.41□□□□□ -1.54
VAPA-203ENST00000577539 ENO3P13929 434 aaPredicted RBP5.41□□□□□ -1.54
VAPA-203ENST00000577539 TYRP1P17643 537 aa5.41□□□□□ -1.54
VAPA-203ENST00000577539 WARSP23381 471 aaKnown RBP5.41□□□□□ -1.54
VAPA-203ENST00000577539 EPHA3P29320 983 aa5.41□□□□□ -1.54
VAPA-203ENST00000577539 MSX2P35548 267 aaPredicted RBP5.41□□□□□ -1.54
VAPA-203ENST00000577539 CCR10P46092 362 aa5.41□□□□□ -1.54
VAPA-203ENST00000577539 NUDT2P50583 147 aa5.41□□□□□ -1.54
VAPA-203ENST00000577539 CLCNKBP51801 687 aa5.41□□□□□ -1.54
VAPA-203ENST00000577539 RAP1GDS1P52306 607 aa5.41□□□□□ -1.54
VAPA-203ENST00000577539 LIMK2P53671 638 aa5.41□□□□□ -1.54
VAPA-203ENST00000577539 CACNA2D1P54289 1103 aa5.41□□□□□ -1.54
VAPA-203ENST00000577539 ACTR3P61158 418 aa5.41□□□□□ -1.54
VAPA-203ENST00000577539 TBL3Q12788 808 aaKnown RBP5.41□□□□□ -1.54
VAPA-203ENST00000577539 CTBP1Q13363 440 aa5.41□□□□□ -1.54
VAPA-203ENST00000577539 GRM3Q14832 879 aa5.41□□□□□ -1.54
VAPA-203ENST00000577539 TRIP10Q15642 601 aa5.41□□□□□ -1.54
VAPA-203ENST00000577539 UBXN11Q5T124 520 aa5.41□□□□□ -1.54
VAPA-203ENST00000577539 OTUD1Q5VV17 481 aaPredicted RBP5.41□□□□□ -1.54
VAPA-203ENST00000577539 OLFML2BQ68BL8 750 aa5.41□□□□□ -1.54
VAPA-203ENST00000577539 NAIF1Q69YI7 327 aaPredicted RBP5.41□□□□□ -1.54
VAPA-203ENST00000577539 NAPEPLDQ6IQ20 393 aa5.41□□□□□ -1.54
VAPA-203ENST00000577539 IRGCQ6NXR0 463 aa5.41□□□□□ -1.54
VAPA-203ENST00000577539 IGF2-ASQ6U949 168 aa5.41□□□□□ -1.54
VAPA-203ENST00000577539 ISLR2Q6UXK2 745 aa5.41□□□□□ -1.54
VAPA-203ENST00000577539 ALKAL1Q6UXT8 129 aa5.41□□□□□ -1.54
VAPA-203ENST00000577539 C8orf86Q6ZUL3 223 aa5.41□□□□□ -1.54
VAPA-203ENST00000577539 HPS6Q86YV9 775 aa5.41□□□□□ -1.54
VAPA-203ENST00000577539 MCATQ8IVS2 390 aaKnown RBP5.41□□□□□ -1.54
VAPA-203ENST00000577539 SCN4BQ8IWT1 228 aa5.41□□□□□ -1.54
VAPA-203ENST00000577539 SMG8Q8ND04 991 aaKnown RBP5.41□□□□□ -1.54
VAPA-203ENST00000577539 ACVR1CQ8NER5 493 aa5.41□□□□□ -1.54
VAPA-203ENST00000577539 KCTD4Q8WVF5 259 aa5.41□□□□□ -1.54
VAPA-203ENST00000577539 NELL1Q92832 810 aa5.41□□□□□ -1.54
VAPA-203ENST00000577539 MARK4Q96L34 752 aa5.41□□□□□ -1.54
VAPA-203ENST00000577539 PARK7Q99497 189 aaKnown RBP5.41□□□□□ -1.54
VAPA-203ENST00000577539 TSC22D3Q99576 134 aa5.41□□□□□ -1.54
VAPA-203ENST00000577539 SMOQ99835 787 aa5.41□□□□□ -1.54
VAPA-203ENST00000577539 OMDQ99983 421 aa5.41□□□□□ -1.54
VAPA-203ENST00000577539 GATA5Q9BWX5 397 aaPredicted RBP5.41□□□□□ -1.54
VAPA-203ENST00000577539 ILKAPQ9H0C8 392 aaPredicted RBP5.41□□□□□ -1.54
VAPA-203ENST00000577539 FAM96AQ9H5X1 160 aa5.41□□□□□ -1.54
VAPA-203ENST00000577539 RETREG1Q9H6L5 497 aa5.41□□□□□ -1.54
VAPA-203ENST00000577539 TCF7L2Q9NQB0 619 aa5.41□□□□□ -1.54
VAPA-203ENST00000577539 ANLNQ9NQW6 1124 aa5.41□□□□□ -1.54
VAPA-203ENST00000577539 EIF2B3Q9NR50 452 aaKnown RBP5.41□□□□□ -1.54
VAPA-203ENST00000577539 PLA2G4CQ9UP65 541 aa5.41□□□□□ -1.54
VAPA-203ENST00000577539 DCLK1O15075 740 aa5.41□□□□□ -1.54
VAPA-203ENST00000577539 FBXO21O94952 628 aa5.41□□□□□ -1.54
VAPA-203ENST00000577539 AMHP03971 560 aa5.41□□□□□ -1.54
VAPA-203ENST00000577539 CPB1P15086 417 aa5.41□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 1183 ms