RNA–Protein interactions for RNA: ENST00000572365.1

SF3B3-214, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 575 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-214ENST00000572365 CACTINQ8WUQ7 758 aaKnown RBP5.79□□□□□ -1.48
SF3B3-214ENST00000572365 OSCP1Q8WVF1 389 aa5.79□□□□□ -1.48
SF3B3-214ENST00000572365 FGF13Q92913 245 aa5.79□□□□□ -1.48
SF3B3-214ENST00000572365 LENG9Q96B70 501 aa5.79□□□□□ -1.48
SF3B3-214ENST00000572365 NAP1L5Q96NT1 182 aaPredicted RBP5.79□□□□□ -1.48
SF3B3-214ENST00000572365 INPP4AQ96PE3 977 aaPredicted RBP5.79□□□□□ -1.48
SF3B3-214ENST00000572365 PRPF18Q99633 342 aaKnown RBP5.79□□□□□ -1.48
SF3B3-214ENST00000572365 SORBS1Q9BX66 1292 aaKnown RBP5.79□□□□□ -1.48
SF3B3-214ENST00000572365 HELLSQ9NRZ9 838 aa5.79□□□□□ -1.48
SF3B3-214ENST00000572365 TBC1D13Q9NVG8 400 aa5.79□□□□□ -1.48
SF3B3-214ENST00000572365 ANKFY1Q9P2R3 1169 aa5.79□□□□□ -1.48
SF3B3-214ENST00000572365 CACNG4Q9UBN1 327 aa5.79□□□□□ -1.48
SF3B3-214ENST00000572365 PNMA2Q9UL42 364 aa5.79□□□□□ -1.48
SF3B3-214ENST00000572365 PRG3Q9Y2Y8 225 aaPredicted RBP5.79□□□□□ -1.48
SF3B3-214ENST00000572365 HS3ST4Q9Y661 456 aa5.79□□□□□ -1.48
SF3B3-214ENST00000572365 TDRD15B5MCY1 1934 aaKnown RBP5.79□□□□□ -1.48
SF3B3-214ENST00000572365 NEDD4P46934 1319 aa5.78□□□□□ -1.48
SF3B3-214ENST00000572365 CENPVL1A0A0U1RR11 272 aa5.78□□□□□ -1.48
SF3B3-214ENST00000572365 UNC119BA6NIH7 251 aa5.78□□□□□ -1.48
SF3B3-214ENST00000572365 ZAR1LA6NP61 321 aa5.78□□□□□ -1.48
SF3B3-214ENST00000572365 KLRF2D3W0D1 207 aa5.78□□□□□ -1.48
SF3B3-214ENST00000572365 PCDH17O14917 1159 aa5.78□□□□□ -1.48
SF3B3-214ENST00000572365 PPM1DO15297 605 aa5.78□□□□□ -1.48
SF3B3-214ENST00000572365 NCAM2O15394 837 aa5.78□□□□□ -1.48
SF3B3-214ENST00000572365 PROM1O43490 865 aa5.78□□□□□ -1.48
SF3B3-214ENST00000572365 LRP3O75074 770 aa5.78□□□□□ -1.48
SF3B3-214ENST00000572365 GLUD1P00367 558 aa5.78□□□□□ -1.48
SF3B3-214ENST00000572365 C1SP09871 688 aa5.78□□□□□ -1.48
SF3B3-214ENST00000572365 KRT10P13645 584 aa5.78□□□□□ -1.48
SF3B3-214ENST00000572365 CCNE1P24864 410 aa5.78□□□□□ -1.48
SF3B3-214ENST00000572365 EPHA3P29320 983 aa5.78□□□□□ -1.48
SF3B3-214ENST00000572365 POLE2P56282 527 aa5.78□□□□□ -1.48
SF3B3-214ENST00000572365 GPS1Q13098 491 aa5.78□□□□□ -1.48
SF3B3-214ENST00000572365 BIRC3Q13489 604 aa5.78□□□□□ -1.48
SF3B3-214ENST00000572365 TP53BP2Q13625 1128 aa5.78□□□□□ -1.48
SF3B3-214ENST00000572365 NRN1LQ496H8 165 aa5.78□□□□□ -1.48
SF3B3-214ENST00000572365 TIGD2Q4W5G0 525 aa5.78□□□□□ -1.48
SF3B3-214ENST00000572365 JMJD6Q6NYC1 403 aaPredicted RBP5.78□□□□□ -1.48
SF3B3-214ENST00000572365 Q6ZS52 159 aa5.78□□□□□ -1.48
SF3B3-214ENST00000572365 MFSD6Q6ZSS7 791 aa5.78□□□□□ -1.48
SF3B3-214ENST00000572365 TBC1D10CQ8IV04 446 aa5.78□□□□□ -1.48
SF3B3-214ENST00000572365 IZUMO1Q8IYV9 350 aa5.78□□□□□ -1.48
SF3B3-214ENST00000572365 GALNT15Q8N3T1 639 aa5.78□□□□□ -1.48
SF3B3-214ENST00000572365 NME8Q8N427 588 aa5.78□□□□□ -1.48
SF3B3-214ENST00000572365 LRRC71Q8N4P6 559 aa5.78□□□□□ -1.48
SF3B3-214ENST00000572365 RSC1A1Q92681 617 aa5.78□□□□□ -1.48
SF3B3-214ENST00000572365 PTCD3Q96EY7 689 aaKnown RBP5.78□□□□□ -1.48
SF3B3-214ENST00000572365 INO80BQ9C086 356 aaPredicted RBP5.78□□□□□ -1.48
SF3B3-214ENST00000572365 TP63Q9H3D4 680 aaPredicted RBP5.78□□□□□ -1.48
SF3B3-214ENST00000572365 ELAC1Q9H777 363 aaKnown RBP5.78□□□□□ -1.48
SF3B3-214ENST00000572365 KAT14Q9H8E8 782 aa5.78□□□□□ -1.48
SF3B3-214ENST00000572365 MRPL17Q9NRX2 175 aaKnown RBP5.78□□□□□ -1.48
SF3B3-214ENST00000572365 ECHDC1Q9NTX5 307 aa5.78□□□□□ -1.48
SF3B3-214ENST00000572365 TCP11L1Q9NUJ3 509 aa5.78□□□□□ -1.48
SF3B3-214ENST00000572365 TBCCD1Q9NVR7 557 aa5.78□□□□□ -1.48
SF3B3-214ENST00000572365 CFAP46Q8IYW2 2715 aa5.78□□□□□ -1.48
SF3B3-214ENST00000572365 KDM3AQ9Y4C1 1321 aa5.77□□□□□ -1.49
SF3B3-214ENST00000572365 PTPRBP23467 1997 aa5.77□□□□□ -1.49
SF3B3-214ENST00000572365 TEX15Q9BXT5 2789 aa5.77□□□□□ -1.49
SF3B3-214ENST00000572365 AGPSO00116 658 aa5.77□□□□□ -1.49
SF3B3-214ENST00000572365 IPO5O00410 1097 aaKnown RBP5.77□□□□□ -1.49
SF3B3-214ENST00000572365 ZBTB5O15062 677 aa5.77□□□□□ -1.49
SF3B3-214ENST00000572365 DHHO43323 396 aa5.77□□□□□ -1.49
SF3B3-214ENST00000572365 C1QL1O75973 258 aa5.77□□□□□ -1.49
SF3B3-214ENST00000572365 VIPP01282 170 aa5.77□□□□□ -1.49
SF3B3-214ENST00000572365 ITGA2BP08514 1039 aa5.77□□□□□ -1.49
SF3B3-214ENST00000572365 PLA2G2AP14555 144 aa5.77□□□□□ -1.49
SF3B3-214ENST00000572365 PTMSP20962 102 aa5.77□□□□□ -1.49
SF3B3-214ENST00000572365 RBL1P28749 1068 aa5.77□□□□□ -1.49
SF3B3-214ENST00000572365 LIMK1P53667 647 aa5.77□□□□□ -1.49
SF3B3-214ENST00000572365 CRYBB1P53674 252 aaPredicted RBP5.77□□□□□ -1.49
SF3B3-214ENST00000572365 POLGP54098 1239 aaPredicted RBP5.77□□□□□ -1.49
SF3B3-214ENST00000572365 ARL4CP56559 192 aa5.77□□□□□ -1.49
SF3B3-214ENST00000572365 NXPH1P58417 271 aa5.77□□□□□ -1.49
SF3B3-214ENST00000572365 ACTR2P61160 394 aa5.77□□□□□ -1.49
SF3B3-214ENST00000572365 FHL3Q13643 280 aa5.77□□□□□ -1.49
SF3B3-214ENST00000572365 POSTNQ15063 836 aa5.77□□□□□ -1.49
SF3B3-214ENST00000572365 UBE2SQ16763 222 aa5.77□□□□□ -1.49
SF3B3-214ENST00000572365 DEPDC1Q5TB30 811 aa5.77□□□□□ -1.49
SF3B3-214ENST00000572365 VWA1Q6PCB0 445 aa5.77□□□□□ -1.49
SF3B3-214ENST00000572365 PRSS55Q6UWB4 352 aaPredicted RBP5.77□□□□□ -1.49
SF3B3-214ENST00000572365 RASGRP3Q8IV61 690 aa5.77□□□□□ -1.49
SF3B3-214ENST00000572365 PNPLA1Q8N8W4 532 aa5.77□□□□□ -1.49
SF3B3-214ENST00000572365 B3GALNT2Q8NCR0 500 aa5.77□□□□□ -1.49
SF3B3-214ENST00000572365 ABHD5Q8WTS1 349 aa5.77□□□□□ -1.49
SF3B3-214ENST00000572365 TRIM63Q969Q1 353 aa5.77□□□□□ -1.49
SF3B3-214ENST00000572365 ZBTB45Q96K62 511 aaPredicted RBP5.77□□□□□ -1.49
SF3B3-214ENST00000572365 TTC14Q96N46 770 aa5.77□□□□□ -1.49
SF3B3-214ENST00000572365 PLEKHG4BQ96PX9 1271 aa5.77□□□□□ -1.49
SF3B3-214ENST00000572365 HIST1H2AAQ96QV6 131 aa5.77□□□□□ -1.49
SF3B3-214ENST00000572365 WDR24Q96S15 920 aa5.77□□□□□ -1.49
SF3B3-214ENST00000572365 EDEM2Q9BV94 578 aa5.77□□□□□ -1.49
SF3B3-214ENST00000572365 AZI2Q9H6S1 392 aa5.77□□□□□ -1.49
SF3B3-214ENST00000572365 ANAPC4Q9UJX5 808 aa5.77□□□□□ -1.49
SF3B3-214ENST00000572365 CDH7Q9ULB5 785 aa5.77□□□□□ -1.49
SF3B3-214ENST00000572365 DOPEY2Q9Y3R5 2298 aa5.77□□□□□ -1.49
SF3B3-214ENST00000572365 CEP192Q8TEP8 1941 aa5.76□□□□□ -1.49
SF3B3-214ENST00000572365 A0A0U1RQF3 1178 aa5.76□□□□□ -1.49
SF3B3-214ENST00000572365 TMEM8BA6NDV4 472 aa5.76□□□□□ -1.49
SF3B3-214ENST00000572365 M0R3H8 397 aa5.76□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms