RNA–Protein interactions for RNA: ENST00000525248.1

CKAP5-203, Transcript of cytoskeleton associated protein 5, humanhuman

TSL 3

Gene CKAP5, Length 698 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP5-203ENST00000525248 CRTC2Q53ET0 693 aaPredicted RBP9.3□□□□□ -0.92
CKAP5-203ENST00000525248 GDPD4Q6W3E5 623 aa9.3□□□□□ -0.92
CKAP5-203ENST00000525248 ZNF295-AS1Q8N0V1 137 aa9.3□□□□□ -0.92
CKAP5-203ENST00000525248 RBFAQ8N0V3 343 aa9.3□□□□□ -0.92
CKAP5-203ENST00000525248 RAB7BQ96AH8 199 aa9.3□□□□□ -0.92
CKAP5-203ENST00000525248 VOPP1Q96AW1 172 aa9.3□□□□□ -0.92
CKAP5-203ENST00000525248 CELF6Q96J87 481 aaKnown RBP9.3□□□□□ -0.92
CKAP5-203ENST00000525248 BMFQ96LC9 184 aa9.3□□□□□ -0.92
CKAP5-203ENST00000525248 APOLD1Q96LR9 279 aa9.3□□□□□ -0.92
CKAP5-203ENST00000525248 KLF6Q99612 283 aaPredicted RBP9.3□□□□□ -0.92
CKAP5-203ENST00000525248 GPR27Q9NS67 375 aa9.3□□□□□ -0.92
CKAP5-203ENST00000525248 NLGN3Q9NZ94 848 aa9.3□□□□□ -0.92
CKAP5-203ENST00000525248 LHX3Q9UBR4 397 aa9.3□□□□□ -0.92
CKAP5-203ENST00000525248 KLF15Q9UIH9 416 aa9.3□□□□□ -0.92
CKAP5-203ENST00000525248 FZD10Q9ULW2 581 aa9.3□□□□□ -0.92
CKAP5-203ENST00000525248 PCDHB1Q9Y5F3 818 aa9.3□□□□□ -0.92
CKAP5-203ENST00000525248 KALRNO60229 2985 aa9.3□□□□□ -0.92
CKAP5-203ENST00000525248 ARID1BQ8NFD5 2236 aaPredicted RBP9.29□□□□□ -0.92
CKAP5-203ENST00000525248 ADAMTS20P59510 1910 aa9.29□□□□□ -0.92
CKAP5-203ENST00000525248 A0A087WV48 116 aa9.29□□□□□ -0.92
CKAP5-203ENST00000525248 LY6G6EA0A0G2JKS1 128 aa9.29□□□□□ -0.92
CKAP5-203ENST00000525248 SPTY2D1-AS1A0A0U1RR47 76 aa9.29□□□□□ -0.92
CKAP5-203ENST00000525248 LRRC53A6NM62 1247 aa9.29□□□□□ -0.92
CKAP5-203ENST00000525248 K7ESM1 405 aa9.29□□□□□ -0.92
CKAP5-203ENST00000525248 AREL1O15033 823 aa9.29□□□□□ -0.92
CKAP5-203ENST00000525248 TEX33O43247 280 aa9.29□□□□□ -0.92
CKAP5-203ENST00000525248 TLX3O43711 291 aaPredicted RBP9.29□□□□□ -0.92
CKAP5-203ENST00000525248 BRINP1O60477 761 aa9.29□□□□□ -0.92
CKAP5-203ENST00000525248 MMP20O60882 483 aa9.29□□□□□ -0.92
CKAP5-203ENST00000525248 POP4O95707 220 aaKnown RBP9.29□□□□□ -0.92
CKAP5-203ENST00000525248 MBD3O95983 291 aa9.29□□□□□ -0.92
CKAP5-203ENST00000525248 CKMT1AP12532 417 aa9.29□□□□□ -0.92
CKAP5-203ENST00000525248 DESP17661 470 aa9.29□□□□□ -0.92
CKAP5-203ENST00000525248 XPAP23025 273 aaPredicted RBP9.29□□□□□ -0.92
CKAP5-203ENST00000525248 PSMA2P25787 234 aa9.29□□□□□ -0.92
CKAP5-203ENST00000525248 ITPKBP27987 946 aa9.29□□□□□ -0.92
CKAP5-203ENST00000525248 ABCG1P45844 678 aa9.29□□□□□ -0.92
CKAP5-203ENST00000525248 THOP1P52888 689 aa9.29□□□□□ -0.92
CKAP5-203ENST00000525248 HNRNPKP61978 463 aaKnown RBP eCLIP9.29□□□□□ -0.92
CKAP5-203ENST00000525248 SERINC3Q13530 473 aa9.29□□□□□ -0.92
CKAP5-203ENST00000525248 ASIC2Q16515 512 aa9.29□□□□□ -0.92
CKAP5-203ENST00000525248 CDKN3Q16667 212 aa9.29□□□□□ -0.92
CKAP5-203ENST00000525248 DEFB133Q30KQ1 61 aa9.29□□□□□ -0.92
CKAP5-203ENST00000525248 E4F1Q66K89 784 aaPredicted RBP9.29□□□□□ -0.92
CKAP5-203ENST00000525248 ACAD10Q6JQN1 1059 aa9.29□□□□□ -0.92
CKAP5-203ENST00000525248 CRTC1Q6UUV9 634 aa9.29□□□□□ -0.92
CKAP5-203ENST00000525248 TTC7BQ86TV6 843 aa9.29□□□□□ -0.92
CKAP5-203ENST00000525248 MCOLN2Q8IZK6 566 aa9.29□□□□□ -0.92
CKAP5-203ENST00000525248 DCBLD1Q8N8Z6 715 aa9.29□□□□□ -0.92
CKAP5-203ENST00000525248 DENND6BQ8NEG7 585 aa9.29□□□□□ -0.92
CKAP5-203ENST00000525248 LMX1AQ8TE12 382 aa9.29□□□□□ -0.92
CKAP5-203ENST00000525248 CXorf40AQ8TE69 158 aa9.29□□□□□ -0.92
CKAP5-203ENST00000525248 ARHGEF26Q96DR7 871 aa9.29□□□□□ -0.92
CKAP5-203ENST00000525248 PEBP4Q96S96 227 aa9.29□□□□□ -0.92
CKAP5-203ENST00000525248 TRIM7Q9C029 511 aa9.29□□□□□ -0.92
CKAP5-203ENST00000525248 TTYH3Q9C0H2 523 aa9.29□□□□□ -0.92
CKAP5-203ENST00000525248 TCEAL2Q9H3H9 227 aaPredicted RBP9.29□□□□□ -0.92
CKAP5-203ENST00000525248 DHX35Q9H5Z1 703 aaKnown RBP9.29□□□□□ -0.92
CKAP5-203ENST00000525248 CATSPERBQ9H7T0 1116 aa9.29□□□□□ -0.92
CKAP5-203ENST00000525248 SYNDIG1Q9H7V2 258 aa9.29□□□□□ -0.92
CKAP5-203ENST00000525248 TMEM63CQ9P1W3 806 aa9.29□□□□□ -0.92
CKAP5-203ENST00000525248 UBA2Q9UBT2 640 aaPredicted RBP9.29□□□□□ -0.92
CKAP5-203ENST00000525248 APOBEC3BQ9UH17 382 aaKnown RBP9.29□□□□□ -0.92
CKAP5-203ENST00000525248 ZNF232Q9UNY5 417 aa9.29□□□□□ -0.92
CKAP5-203ENST00000525248 AP4E1Q9UPM8 1137 aa9.29□□□□□ -0.92
CKAP5-203ENST00000525248 COQ6Q9Y2Z9 468 aa9.29□□□□□ -0.92
CKAP5-203ENST00000525248 U3KQA8 63 aa9.29□□□□□ -0.92
CKAP5-203ENST00000525248 URB1O60287 2271 aaKnown RBP9.28□□□□□ -0.92
CKAP5-203ENST00000525248 CXorf51AA0A1B0GTR3 108 aa9.28□□□□□ -0.92
CKAP5-203ENST00000525248 CPED1A4D0V7 1026 aa9.28□□□□□ -0.92
CKAP5-203ENST00000525248 NEMP2A6NFY4 417 aa9.28□□□□□ -0.92
CKAP5-203ENST00000525248 J3KR12 359 aa9.28□□□□□ -0.92
CKAP5-203ENST00000525248 EEF2KO00418 725 aaKnown RBP9.28□□□□□ -0.92
CKAP5-203ENST00000525248 SCAMP1O15126 338 aa9.28□□□□□ -0.92
CKAP5-203ENST00000525248 FGF10O15520 208 aaPredicted RBP9.28□□□□□ -0.92
CKAP5-203ENST00000525248 AQP9O43315 295 aa9.28□□□□□ -0.92
CKAP5-203ENST00000525248 OPA1O60313 960 aa9.28□□□□□ -0.92
CKAP5-203ENST00000525248 CSO75390 466 aaKnown RBP9.28□□□□□ -0.92
CKAP5-203ENST00000525248 MT-CO3P00414 261 aa9.28□□□□□ -0.92
CKAP5-203ENST00000525248 CSF2P04141 144 aa9.28□□□□□ -0.92
CKAP5-203ENST00000525248 PRKCGP05129 697 aa9.28□□□□□ -0.92
CKAP5-203ENST00000525248 MPOP05164 745 aa9.28□□□□□ -0.92
CKAP5-203ENST00000525248 CCDC172P0C7W6 258 aa9.28□□□□□ -0.92
CKAP5-203ENST00000525248 PFN3P60673 137 aa9.28□□□□□ -0.92
CKAP5-203ENST00000525248 RAD51Q06609 339 aa9.28□□□□□ -0.92
CKAP5-203ENST00000525248 MAMLD1Q13495 774 aa9.28□□□□□ -0.92
CKAP5-203ENST00000525248 C1orf61Q13536 156 aa9.28□□□□□ -0.92
CKAP5-203ENST00000525248 IRF4Q15306 451 aa9.28□□□□□ -0.92
CKAP5-203ENST00000525248 CA9Q16790 459 aa9.28□□□□□ -0.92
CKAP5-203ENST00000525248 ARSJQ5FYB0 599 aaPredicted RBP9.28□□□□□ -0.92
CKAP5-203ENST00000525248 PPP6R3Q5H9R7 873 aaPredicted RBP9.28□□□□□ -0.92
CKAP5-203ENST00000525248 CFAP58Q5T655 872 aa9.28□□□□□ -0.92
CKAP5-203ENST00000525248 ZCCHC8Q6NZY4 707 aaKnown RBP9.28□□□□□ -0.92
CKAP5-203ENST00000525248 GUSBP11Q6P575 273 aa9.28□□□□□ -0.92
CKAP5-203ENST00000525248 EFL1Q7Z2Z2 1120 aaKnown RBP9.28□□□□□ -0.92
CKAP5-203ENST00000525248 ZSCAN30Q86W11 494 aa9.28□□□□□ -0.92
CKAP5-203ENST00000525248 PHACTR4Q8IZ21 702 aa9.28□□□□□ -0.92
CKAP5-203ENST00000525248 NPWQ8N729 165 aa9.28□□□□□ -0.92
CKAP5-203ENST00000525248 PAF1Q8N7H5 531 aa9.28□□□□□ -0.92
CKAP5-203ENST00000525248 IFI44Q8TCB0 444 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms