RNA–Protein interactions for RNA: ENST00000511263.1

HMGB3P13-201, Transcript of high mobility group box 3 pseudogene 13, humanhuman

BASIC

Gene HMGB3P13, Length 607 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P13-201ENST00000511263 P3H2Q8IVL5 708 aa4.8□□□□□ -1.64
HMGB3P13-201ENST00000511263 TMEM57Q8N5G2 664 aa4.8□□□□□ -1.64
HMGB3P13-201ENST00000511263 PNPLA1Q8N8W4 532 aa4.8□□□□□ -1.64
HMGB3P13-201ENST00000511263 FAM71DQ8N9W8 422 aa4.8□□□□□ -1.64
HMGB3P13-201ENST00000511263 USP38Q8NB14 1042 aa4.8□□□□□ -1.64
HMGB3P13-201ENST00000511263 ATL1Q8WXF7 558 aa4.8□□□□□ -1.64
HMGB3P13-201ENST00000511263 NCSTNQ92542 709 aa4.8□□□□□ -1.64
HMGB3P13-201ENST00000511263 RUBCNQ92622 972 aa4.8□□□□□ -1.64
HMGB3P13-201ENST00000511263 TBC1D20Q96BZ9 403 aa4.8□□□□□ -1.64
HMGB3P13-201ENST00000511263 EFHD2Q96C19 240 aaPredicted RBP4.8□□□□□ -1.64
HMGB3P13-201ENST00000511263 GIMAP5Q96F15 307 aa4.8□□□□□ -1.64
HMGB3P13-201ENST00000511263 HIC2Q96JB3 615 aa4.8□□□□□ -1.64
HMGB3P13-201ENST00000511263 ZBTB45Q96K62 511 aaPredicted RBP4.8□□□□□ -1.64
HMGB3P13-201ENST00000511263 LENG8Q96PV6 779 aaPredicted RBP4.8□□□□□ -1.64
HMGB3P13-201ENST00000511263 MTMR9Q96QG7 549 aa4.8□□□□□ -1.64
HMGB3P13-201ENST00000511263 CARD9Q9H257 536 aa4.8□□□□□ -1.64
HMGB3P13-201ENST00000511263 PRDM13Q9H4Q3 707 aa4.8□□□□□ -1.64
HMGB3P13-201ENST00000511263 NOD2Q9HC29 1040 aa4.8□□□□□ -1.64
HMGB3P13-201ENST00000511263 CNGB3Q9NQW8 809 aa4.8□□□□□ -1.64
HMGB3P13-201ENST00000511263 TM7SF3Q9NS93 570 aa4.8□□□□□ -1.64
HMGB3P13-201ENST00000511263 RHBDL2Q9NX52 303 aa4.8□□□□□ -1.64
HMGB3P13-201ENST00000511263 PPP1R14DQ9NXH3 145 aa4.8□□□□□ -1.64
HMGB3P13-201ENST00000511263 CLIC5Q9NZA1 410 aa4.8□□□□□ -1.64
HMGB3P13-201ENST00000511263 EPS15L1Q9UBC2 864 aa4.8□□□□□ -1.64
HMGB3P13-201ENST00000511263 TRPC5Q9UL62 973 aaPredicted RBP4.8□□□□□ -1.64
HMGB3P13-201ENST00000511263 CA14Q9ULX7 337 aa4.8□□□□□ -1.64
HMGB3P13-201ENST00000511263 TBC1D30Q9Y2I9 924 aa4.8□□□□□ -1.64
HMGB3P13-201ENST00000511263 QRICH2Q9H0J4 1663 aa4.8□□□□□ -1.64
HMGB3P13-201ENST00000511263 COL15A1P39059 1388 aa4.79□□□□□ -1.64
HMGB3P13-201ENST00000511263 FNDC1Q4ZHG4 1894 aaPredicted RBP4.79□□□□□ -1.64
HMGB3P13-201ENST00000511263 USP32Q8NFA0 1604 aa4.79□□□□□ -1.64
HMGB3P13-201ENST00000511263 AOX1Q06278 1338 aa4.79□□□□□ -1.64
HMGB3P13-201ENST00000511263 A0A1W2PPC4 97 aa4.79□□□□□ -1.64
HMGB3P13-201ENST00000511263 MANSC4A6NHS7 340 aaPredicted RBP4.79□□□□□ -1.64
HMGB3P13-201ENST00000511263 SYCE1LA8MT33 242 aa4.79□□□□□ -1.64
HMGB3P13-201ENST00000511263 RASA4BC9J798 803 aa4.79□□□□□ -1.64
HMGB3P13-201ENST00000511263 F8W8V4 182 aa4.79□□□□□ -1.64
HMGB3P13-201ENST00000511263 GOLGA8MH3BSY2 632 aa4.79□□□□□ -1.64
HMGB3P13-201ENST00000511263 IFRD1O00458 451 aaPredicted RBP4.79□□□□□ -1.64
HMGB3P13-201ENST00000511263 RASA4O43374 803 aa4.79□□□□□ -1.64
HMGB3P13-201ENST00000511263 FIBPO43427 364 aa4.79□□□□□ -1.64
HMGB3P13-201ENST00000511263 EXTL3O43909 919 aa4.79□□□□□ -1.64
HMGB3P13-201ENST00000511263 RBMXL2O75526 392 aaKnown RBP4.79□□□□□ -1.64
HMGB3P13-201ENST00000511263 TCEA3O75764 348 aa4.79□□□□□ -1.64
HMGB3P13-201ENST00000511263 MT-CO3P00414 261 aa4.79□□□□□ -1.64
HMGB3P13-201ENST00000511263 RHOXF2BP0C7M4 288 aa4.79□□□□□ -1.64
HMGB3P13-201ENST00000511263 EPB41P11171 864 aaKnown RBP4.79□□□□□ -1.64
HMGB3P13-201ENST00000511263 SFTPCP11686 197 aa4.79□□□□□ -1.64
HMGB3P13-201ENST00000511263 TSHRP16473 764 aa4.79□□□□□ -1.64
HMGB3P13-201ENST00000511263 M6PRP20645 277 aa4.79□□□□□ -1.64
HMGB3P13-201ENST00000511263 PRKACBP22694 351 aa4.79□□□□□ -1.64
HMGB3P13-201ENST00000511263 MMP8P22894 467 aa4.79□□□□□ -1.64
HMGB3P13-201ENST00000511263 TMOD1P28289 359 aa4.79□□□□□ -1.64
HMGB3P13-201ENST00000511263 SERPINB6P35237 376 aa4.79□□□□□ -1.64
HMGB3P13-201ENST00000511263 TRIM23P36406 574 aa4.79□□□□□ -1.64
HMGB3P13-201ENST00000511263 HALP42357 657 aa4.79□□□□□ -1.64
HMGB3P13-201ENST00000511263 KRT6CP48668 564 aa4.79□□□□□ -1.64
HMGB3P13-201ENST00000511263 TMED10P49755 219 aaKnown RBP4.79□□□□□ -1.64
HMGB3P13-201ENST00000511263 ALDH18A1P54886 795 aaKnown RBP4.79□□□□□ -1.64
HMGB3P13-201ENST00000511263 POLE2P56282 527 aa4.79□□□□□ -1.64
HMGB3P13-201ENST00000511263 MRPS15P82914 257 aaKnown RBP4.79□□□□□ -1.64
HMGB3P13-201ENST00000511263 HTRA4P83105 476 aaPredicted RBP4.79□□□□□ -1.64
HMGB3P13-201ENST00000511263 SRSF4Q08170 494 aaKnown RBP4.79□□□□□ -1.64
HMGB3P13-201ENST00000511263 TBL3Q12788 808 aaKnown RBP4.79□□□□□ -1.64
HMGB3P13-201ENST00000511263 CETN1Q12798 172 aa4.79□□□□□ -1.64
HMGB3P13-201ENST00000511263 FOXF2Q12947 444 aa4.79□□□□□ -1.64
HMGB3P13-201ENST00000511263 ITGB3BPQ13352 177 aaPredicted RBP4.79□□□□□ -1.64
HMGB3P13-201ENST00000511263 SEMA3AQ14563 771 aa4.79□□□□□ -1.64
HMGB3P13-201ENST00000511263 CASP8Q14790 479 aa4.79□□□□□ -1.64
HMGB3P13-201ENST00000511263 EZH2Q15910 746 aaKnown RBP4.79□□□□□ -1.64
HMGB3P13-201ENST00000511263 SRSF7Q16629 238 aaKnown RBP eCLIP4.79□□□□□ -1.64
HMGB3P13-201ENST00000511263 FAM187BQ17R55 369 aa4.79□□□□□ -1.64
HMGB3P13-201ENST00000511263 KRT71Q3SY84 523 aa4.79□□□□□ -1.64
HMGB3P13-201ENST00000511263 LACTB2Q53H82 288 aaPredicted RBP4.79□□□□□ -1.64
HMGB3P13-201ENST00000511263 ARMC4Q5T2S8 1044 aa4.79□□□□□ -1.64
HMGB3P13-201ENST00000511263 XRRA1Q6P2D8 792 aa4.79□□□□□ -1.64
HMGB3P13-201ENST00000511263 NEK5Q6P3R8 708 aa4.79□□□□□ -1.64
HMGB3P13-201ENST00000511263 TMEM65Q6PI78 240 aa4.79□□□□□ -1.64
HMGB3P13-201ENST00000511263 ANGPTL8Q6UXH0 198 aa4.79□□□□□ -1.64
HMGB3P13-201ENST00000511263 EXOC3L1Q86VI1 746 aa4.79□□□□□ -1.64
HMGB3P13-201ENST00000511263 LIX1LQ8IVB5 337 aa4.79□□□□□ -1.64
HMGB3P13-201ENST00000511263 CROCCP3Q8IVE0 287 aa4.79□□□□□ -1.64
HMGB3P13-201ENST00000511263 MAP7D3Q8IWC1 876 aa4.79□□□□□ -1.64
HMGB3P13-201ENST00000511263 SCYL3Q8IZE3 742 aa4.79□□□□□ -1.64
HMGB3P13-201ENST00000511263 ZNF713Q8N859 430 aaPredicted RBP4.79□□□□□ -1.64
HMGB3P13-201ENST00000511263 PNLDC1Q8NA58 520 aaKnown RBP4.79□□□□□ -1.64
HMGB3P13-201ENST00000511263 IL17REQ8NFR9 667 aa4.79□□□□□ -1.64
HMGB3P13-201ENST00000511263 ZNF566Q969W8 418 aa4.79□□□□□ -1.64
HMGB3P13-201ENST00000511263 GRAMD1AQ96CP6 724 aa4.79□□□□□ -1.64
HMGB3P13-201ENST00000511263 REPS1Q96D71 796 aa4.79□□□□□ -1.64
HMGB3P13-201ENST00000511263 RRP36Q96EU6 259 aaKnown RBP4.79□□□□□ -1.64
HMGB3P13-201ENST00000511263 RBM14Q96PK6 669 aaKnown RBP4.79□□□□□ -1.64
HMGB3P13-201ENST00000511263 GBP5Q96PP8 586 aa4.79□□□□□ -1.64
HMGB3P13-201ENST00000511263 ELAC2Q9BQ52 826 aaKnown RBP4.79□□□□□ -1.64
HMGB3P13-201ENST00000511263 TUBA1CQ9BQE3 449 aa4.79□□□□□ -1.64
HMGB3P13-201ENST00000511263 RHOXF2Q9BQY4 288 aa4.79□□□□□ -1.64
HMGB3P13-201ENST00000511263 SIKE1Q9BRV8 207 aa4.79□□□□□ -1.64
HMGB3P13-201ENST00000511263 HGH1Q9BTY7 390 aa4.79□□□□□ -1.64
HMGB3P13-201ENST00000511263 TPK1Q9H3S4 243 aa4.79□□□□□ -1.64
HMGB3P13-201ENST00000511263 PSTPIP2Q9H939 334 aa4.79□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 121.5 ms