RNA–Protein interactions for RNA: ENST00000505659.1

HMGB1P29-201, Transcript of high mobility group box 1 pseudogene 29, humanhuman

BASIC

Gene HMGB1P29, Length 499 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P29-201ENST00000505659 CLGNO14967 610 aa3.46□□□□□ -1.86
HMGB1P29-201ENST00000505659 TSPAN3O60637 253 aa3.46□□□□□ -1.86
HMGB1P29-201ENST00000505659 NDUFS7O75251 213 aa3.46□□□□□ -1.86
HMGB1P29-201ENST00000505659 PMS2P2O95744 297 aa3.46□□□□□ -1.86
HMGB1P29-201ENST00000505659 PLGP00747 810 aaPredicted RBP3.46□□□□□ -1.86
HMGB1P29-201ENST00000505659 URODP06132 367 aa3.46□□□□□ -1.86
HMGB1P29-201ENST00000505659 UMODP07911 640 aa3.46□□□□□ -1.86
HMGB1P29-201ENST00000505659 PTPN2P17706 415 aa3.46□□□□□ -1.86
HMGB1P29-201ENST00000505659 MT3P25713 68 aa3.46□□□□□ -1.86
HMGB1P29-201ENST00000505659 PEX5P50542 639 aa3.46□□□□□ -1.86
HMGB1P29-201ENST00000505659 NR1H2P55055 460 aa3.46□□□□□ -1.86
HMGB1P29-201ENST00000505659 YWHAZP63104 245 aaKnown RBP3.46□□□□□ -1.86
HMGB1P29-201ENST00000505659 UBE3AQ05086 875 aa3.46□□□□□ -1.86
HMGB1P29-201ENST00000505659 PPFIA1Q13136 1202 aa3.46□□□□□ -1.86
HMGB1P29-201ENST00000505659 CALCRLQ16602 461 aa3.46□□□□□ -1.86
HMGB1P29-201ENST00000505659 SERTAD4-AS1Q5TG53 156 aa3.46□□□□□ -1.86
HMGB1P29-201ENST00000505659 B3GNT6Q6ZMB0 384 aa3.46□□□□□ -1.86
HMGB1P29-201ENST00000505659 ZSCAN2Q7Z7L9 614 aaPredicted RBP3.46□□□□□ -1.86
HMGB1P29-201ENST00000505659 LRRTM4Q86VH4 590 aa3.46□□□□□ -1.86
HMGB1P29-201ENST00000505659 MUC20Q8N307 709 aaPredicted RBP3.46□□□□□ -1.86
HMGB1P29-201ENST00000505659 RFLNBQ8N5W9 214 aa3.46□□□□□ -1.86
HMGB1P29-201ENST00000505659 ZNF441Q8N8Z8 693 aa3.46□□□□□ -1.86
HMGB1P29-201ENST00000505659 SORCS1Q8WY21 1168 aa3.46□□□□□ -1.86
HMGB1P29-201ENST00000505659 RND1Q92730 232 aa3.46□□□□□ -1.86
HMGB1P29-201ENST00000505659 SNAPC3Q92966 411 aa3.46□□□□□ -1.86
HMGB1P29-201ENST00000505659 NODALQ96S42 347 aa3.46□□□□□ -1.86
HMGB1P29-201ENST00000505659 MXRA8Q9BRK3 442 aa3.46□□□□□ -1.86
HMGB1P29-201ENST00000505659 HERPUD2Q9BSE4 406 aa3.46□□□□□ -1.86
HMGB1P29-201ENST00000505659 SDF2L1Q9HCN8 221 aa3.46□□□□□ -1.86
HMGB1P29-201ENST00000505659 BABAM1Q9NWV8 329 aa3.46□□□□□ -1.86
HMGB1P29-201ENST00000505659 IL1RAPL1Q9NZN1 696 aa3.46□□□□□ -1.86
HMGB1P29-201ENST00000505659 SLCO3A1Q9UIG8 710 aa3.46□□□□□ -1.86
HMGB1P29-201ENST00000505659 KCNS2Q9ULS6 477 aa3.46□□□□□ -1.86
HMGB1P29-201ENST00000505659 PSAT1Q9Y617 370 aa3.46□□□□□ -1.86
HMGB1P29-201ENST00000505659 MAGEA13PA6NCF6 341 aa3.45□□□□□ -1.86
HMGB1P29-201ENST00000505659 IFRD1O00458 451 aaPredicted RBP3.45□□□□□ -1.86
HMGB1P29-201ENST00000505659 SOCS6O14544 535 aa3.45□□□□□ -1.86
HMGB1P29-201ENST00000505659 BCAT2O15382 392 aaPredicted RBP3.45□□□□□ -1.86
HMGB1P29-201ENST00000505659 TACC1O75410 805 aa3.45□□□□□ -1.86
HMGB1P29-201ENST00000505659 F7P08709 466 aaPredicted RBP3.45□□□□□ -1.86
HMGB1P29-201ENST00000505659 LINC00271P0C7V0 271 aa3.45□□□□□ -1.86
HMGB1P29-201ENST00000505659 CNTFP26441 200 aa3.45□□□□□ -1.86
HMGB1P29-201ENST00000505659 HNRNPH1P31943 449 aaKnown RBP3.45□□□□□ -1.86
HMGB1P29-201ENST00000505659 EIF2S3P41091 472 aaKnown RBP3.45□□□□□ -1.86
HMGB1P29-201ENST00000505659 NLRP5P59047 1200 aa3.45□□□□□ -1.86
HMGB1P29-201ENST00000505659 EFNB1P98172 346 aa3.45□□□□□ -1.86
HMGB1P29-201ENST00000505659 NFIL3Q16649 462 aa3.45□□□□□ -1.86
HMGB1P29-201ENST00000505659 ANKRD54Q6NXT1 300 aa3.45□□□□□ -1.86
HMGB1P29-201ENST00000505659 MEX3BQ6ZN04 569 aaKnown RBP3.45□□□□□ -1.86
HMGB1P29-201ENST00000505659 DHX40Q8IX18 779 aaKnown RBP3.45□□□□□ -1.86
HMGB1P29-201ENST00000505659 POC1AQ8NBT0 407 aa3.45□□□□□ -1.86
HMGB1P29-201ENST00000505659 SPATA22Q8NHS9 363 aa3.45□□□□□ -1.86
HMGB1P29-201ENST00000505659 MTBPQ96DY7 904 aa3.45□□□□□ -1.86
HMGB1P29-201ENST00000505659 C3orf30Q96M34 536 aa3.45□□□□□ -1.86
HMGB1P29-201ENST00000505659 INPP4AQ96PE3 977 aaPredicted RBP3.45□□□□□ -1.86
HMGB1P29-201ENST00000505659 OR1F2PQ96R84 312 aa3.45□□□□□ -1.86
HMGB1P29-201ENST00000505659 KIAA1456Q9P272 454 aa3.45□□□□□ -1.86
HMGB1P29-201ENST00000505659 HSPB7Q9UBY9 170 aa3.45□□□□□ -1.86
HMGB1P29-201ENST00000505659 NOL12Q9UGY1 213 aaKnown RBP eCLIP3.45□□□□□ -1.86
HMGB1P29-201ENST00000505659 HNRNPCL2B2RXH8 293 aa3.44□□□□□ -1.86
HMGB1P29-201ENST00000505659 WNT9BO14905 357 aa3.44□□□□□ -1.86
HMGB1P29-201ENST00000505659 LINC01565O15544 149 aa3.44□□□□□ -1.86
HMGB1P29-201ENST00000505659 KRT86O43790 486 aa3.44□□□□□ -1.86
HMGB1P29-201ENST00000505659 XPNPEP2O43895 674 aa3.44□□□□□ -1.86
HMGB1P29-201ENST00000505659 IGLV2-11P01706 119 aa3.44□□□□□ -1.86
HMGB1P29-201ENST00000505659 GALTP07902 379 aa3.44□□□□□ -1.86
HMGB1P29-201ENST00000505659 CYC1P08574 325 aa3.44□□□□□ -1.86
HMGB1P29-201ENST00000505659 ETFAP13804 333 aa3.44□□□□□ -1.86
HMGB1P29-201ENST00000505659 GGT5P36269 586 aa3.44□□□□□ -1.86
HMGB1P29-201ENST00000505659 PGM1P36871 562 aa3.44□□□□□ -1.86
HMGB1P29-201ENST00000505659 ARL16Q0P5N6 197 aa3.44□□□□□ -1.86
HMGB1P29-201ENST00000505659 ZBTB17Q13105 803 aa3.44□□□□□ -1.86
HMGB1P29-201ENST00000505659 KRT81Q14533 505 aa3.44□□□□□ -1.86
HMGB1P29-201ENST00000505659 OASLQ15646 514 aaKnown RBP3.44□□□□□ -1.86
HMGB1P29-201ENST00000505659 ZRSR1Q15695 479 aaKnown RBP3.44□□□□□ -1.86
HMGB1P29-201ENST00000505659 AMZ1Q400G9 498 aa3.44□□□□□ -1.86
HMGB1P29-201ENST00000505659 ZNF766Q5HY98 468 aa3.44□□□□□ -1.86
HMGB1P29-201ENST00000505659 GFI1BQ5VTD9 330 aa3.44□□□□□ -1.86
HMGB1P29-201ENST00000505659 WDR73Q6P4I2 378 aa3.44□□□□□ -1.86
HMGB1P29-201ENST00000505659 TMEM81Q6P7N7 255 aa3.44□□□□□ -1.86
HMGB1P29-201ENST00000505659 FBXO46Q6PJ61 603 aaPredicted RBP3.44□□□□□ -1.86
HMGB1P29-201ENST00000505659 SMIM29Q86T20 159 aa3.44□□□□□ -1.86
HMGB1P29-201ENST00000505659 TADA2BQ86TJ2 420 aa3.44□□□□□ -1.86
HMGB1P29-201ENST00000505659 TDRPQ86YL5 185 aa3.44□□□□□ -1.86
HMGB1P29-201ENST00000505659 FOXRED2Q8IWF2 684 aa3.44□□□□□ -1.86
HMGB1P29-201ENST00000505659 SLC35F3Q8IY50 421 aa3.44□□□□□ -1.86
HMGB1P29-201ENST00000505659 KBTBD3Q8NAB2 608 aa3.44□□□□□ -1.86
HMGB1P29-201ENST00000505659 SECTM1Q8WVN6 248 aa3.44□□□□□ -1.86
HMGB1P29-201ENST00000505659 TRIM63Q969Q1 353 aa3.44□□□□□ -1.86
HMGB1P29-201ENST00000505659 ZBTB10Q96DT7 871 aa3.44□□□□□ -1.86
HMGB1P29-201ENST00000505659 BBS4Q96RK4 519 aa3.44□□□□□ -1.86
HMGB1P29-201ENST00000505659 SIN3AQ96ST3 1273 aa3.44□□□□□ -1.86
HMGB1P29-201ENST00000505659 MPHOSPH8Q99549 860 aa3.44□□□□□ -1.86
HMGB1P29-201ENST00000505659 ESRP2Q9H6T0 727 aaKnown RBP3.44□□□□□ -1.86
HMGB1P29-201ENST00000505659 TCF7L2Q9NQB0 619 aa3.44□□□□□ -1.86
HMGB1P29-201ENST00000505659 C20orf141Q9NUB4 165 aa3.44□□□□□ -1.86
HMGB1P29-201ENST00000505659 TMEM160Q9NX00 188 aa3.44□□□□□ -1.86
HMGB1P29-201ENST00000505659 ZNF224Q9NZL3 707 aa3.44□□□□□ -1.86
HMGB1P29-201ENST00000505659 TINAGQ9UJW2 476 aa3.44□□□□□ -1.86
HMGB1P29-201ENST00000505659 CARD8Q9Y2G2 431 aa3.44□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 120.8 ms