RNA–Protein interactions for RNA: ENST00000498107.5

SSBP1-214, Transcript of single stranded DNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSBP1, Length 636 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-214ENST00000498107 A0A1W2PQU0 124 aa16.09■□□□□ 0.17
SSBP1-214ENST00000498107 GOLGA6CA6NDK9 693 aa16.09■□□□□ 0.17
SSBP1-214ENST00000498107 GOLGA6BA6NDN3 693 aa16.09■□□□□ 0.17
SSBP1-214ENST00000498107 C10orf142B7Z368 130 aa16.09■□□□□ 0.17
SSBP1-214ENST00000498107 LATO43561 262 aa16.09■□□□□ 0.17
SSBP1-214ENST00000498107 FZD6O60353 706 aa16.09■□□□□ 0.17
SSBP1-214ENST00000498107 FOXD2O60548 495 aaPredicted RBP16.09■□□□□ 0.17
SSBP1-214ENST00000498107 GCATO75600 419 aa16.09■□□□□ 0.17
SSBP1-214ENST00000498107 ANXA9O76027 345 aa16.09■□□□□ 0.17
SSBP1-214ENST00000498107 IGHV4-34P06331 123 aa16.09■□□□□ 0.17
SSBP1-214ENST00000498107 ITGAVP06756 1048 aa16.09■□□□□ 0.17
SSBP1-214ENST00000498107 MMP2P08253 660 aa16.09■□□□□ 0.17
SSBP1-214ENST00000498107 GOLGA6DP0CG33 693 aa16.09■□□□□ 0.17
SSBP1-214ENST00000498107 NFKB1P19838 968 aa16.09■□□□□ 0.17
SSBP1-214ENST00000498107 ITPKAP23677 461 aa16.09■□□□□ 0.17
SSBP1-214ENST00000498107 MPLP40238 635 aa16.09■□□□□ 0.17
SSBP1-214ENST00000498107 ETF1P62495 437 aaKnown RBP16.09■□□□□ 0.17
SSBP1-214ENST00000498107 FAM193AP78312 1265 aa16.09■□□□□ 0.17
SSBP1-214ENST00000498107 SGCGQ13326 291 aa16.09■□□□□ 0.17
SSBP1-214ENST00000498107 MPP3Q13368 585 aa16.09■□□□□ 0.17
SSBP1-214ENST00000498107 P3H1Q32P28 736 aa16.09■□□□□ 0.17
SSBP1-214ENST00000498107 TMEM52BQ4KMG9 183 aa16.09■□□□□ 0.17
SSBP1-214ENST00000498107 PEAR1Q5VY43 1037 aaPredicted RBP16.09■□□□□ 0.17
SSBP1-214ENST00000498107 ARHGEF18Q6ZSZ5 1173 aa16.09■□□□□ 0.17
SSBP1-214ENST00000498107 GPR161Q8N6U8 529 aaKnown RBP16.09■□□□□ 0.17
SSBP1-214ENST00000498107 FAM71DQ8N9W8 422 aa16.09■□□□□ 0.17
SSBP1-214ENST00000498107 C1orf54Q8WWF1 131 aa16.09■□□□□ 0.17
SSBP1-214ENST00000498107 ATG4AQ8WYN0 398 aa16.09■□□□□ 0.17
SSBP1-214ENST00000498107 IFT43Q96FT9 208 aa16.09■□□□□ 0.17
SSBP1-214ENST00000498107 NSMCE3Q96MG7 304 aa16.09■□□□□ 0.17
SSBP1-214ENST00000498107 RBM15Q96T37 977 aaKnown RBP eCLIP16.09■□□□□ 0.17
SSBP1-214ENST00000498107 TMEM121Q9BTD3 319 aa16.09■□□□□ 0.17
SSBP1-214ENST00000498107 MIR1-1HGQ9H1L0 117 aa16.09■□□□□ 0.17
SSBP1-214ENST00000498107 GBA3Q9H227 469 aa16.09■□□□□ 0.17
SSBP1-214ENST00000498107 ARRDC1-AS1Q9H2J1 176 aa16.09■□□□□ 0.17
SSBP1-214ENST00000498107 C10orf88Q9H8K7 445 aa16.09■□□□□ 0.17
SSBP1-214ENST00000498107 GOLGA6AQ9NYA3 693 aa16.09■□□□□ 0.17
SSBP1-214ENST00000498107 EIF2B4Q9UI10 523 aaKnown RBP16.09■□□□□ 0.17
SSBP1-214ENST00000498107 PILRBQ9UKJ0 227 aa16.09■□□□□ 0.17
SSBP1-214ENST00000498107 AAR2Q9Y312 384 aaKnown RBP16.09■□□□□ 0.17
SSBP1-214ENST00000498107 SAR1BQ9Y6B6 198 aa16.09■□□□□ 0.17
SSBP1-214ENST00000498107 TRPM6Q9BX84 2022 aa16.09■□□□□ 0.17
SSBP1-214ENST00000498107 GPR179Q6PRD1 2367 aa16.08■□□□□ 0.17
SSBP1-214ENST00000498107 CD68P34810 354 aaPredicted RBP16.08■□□□□ 0.16
SSBP1-214ENST00000498107 MMP12P39900 470 aa16.08■□□□□ 0.16
SSBP1-214ENST00000498107 GEMP55040 296 aa16.08■□□□□ 0.16
SSBP1-214ENST00000498107 PPP2CBP62714 309 aa16.08■□□□□ 0.16
SSBP1-214ENST00000498107 PPP2CAP67775 309 aa16.08■□□□□ 0.16
SSBP1-214ENST00000498107 LMNB2Q03252 620 aa16.08■□□□□ 0.16
SSBP1-214ENST00000498107 CDK18Q07002 472 aa16.08■□□□□ 0.16
SSBP1-214ENST00000498107 SIX1Q15475 284 aaPredicted RBP16.08■□□□□ 0.16
SSBP1-214ENST00000498107 OASLQ15646 514 aaKnown RBP16.08■□□□□ 0.16
SSBP1-214ENST00000498107 DUOXA1Q1HG43 343 aa16.08■□□□□ 0.16
SSBP1-214ENST00000498107 DPPA4Q7L190 304 aa16.08■□□□□ 0.16
SSBP1-214ENST00000498107 ZSWIM9Q86XI8 627 aa16.08■□□□□ 0.16
SSBP1-214ENST00000498107 C17orf53Q8N3J3 647 aaPredicted RBP16.08■□□□□ 0.16
SSBP1-214ENST00000498107 COG1Q8WTW3 980 aa16.08■□□□□ 0.16
SSBP1-214ENST00000498107 PIH1D2Q8WWB5 315 aa16.08■□□□□ 0.16
SSBP1-214ENST00000498107 ASB12Q8WXK4 309 aa16.08■□□□□ 0.16
SSBP1-214ENST00000498107 SKA1Q96BD8 255 aa16.08■□□□□ 0.16
SSBP1-214ENST00000498107 TADA1Q96BN2 335 aa16.08■□□□□ 0.16
SSBP1-214ENST00000498107 RTP4Q96DX8 246 aa16.08■□□□□ 0.16
SSBP1-214ENST00000498107 SCRN2Q96FV2 425 aa16.08■□□□□ 0.16
SSBP1-214ENST00000498107 SRPK1Q96SB4 655 aaKnown RBP16.08■□□□□ 0.16
SSBP1-214ENST00000498107 PHOX2BQ99453 314 aa16.08■□□□□ 0.16
SSBP1-214ENST00000498107 C1QTNF7Q9BXJ2 289 aa16.08■□□□□ 0.16
SSBP1-214ENST00000498107 RNF14Q9UBS8 474 aa16.08■□□□□ 0.16
SSBP1-214ENST00000498107 CHKBQ9Y259 395 aa16.08■□□□□ 0.16
SSBP1-214ENST00000498107 PPIL1Q9Y3C6 166 aa16.08■□□□□ 0.16
SSBP1-214ENST00000498107 OTOGLQ3ZCN5 2332 aa16.08■□□□□ 0.16
SSBP1-214ENST00000498107 TNRC6BQ9UPQ9 1833 aaKnown RBP16.08■□□□□ 0.16
SSBP1-214ENST00000498107 RALGAPA1Q6GYQ0 2036 aa16.07■□□□□ 0.16
SSBP1-214ENST00000498107 ZFHX2Q9C0A1 2572 aaPredicted RBP16.07■□□□□ 0.16
SSBP1-214ENST00000498107 A0A1B0GTW7 788 aa16.07■□□□□ 0.16
SSBP1-214ENST00000498107 PRAMEF26H0Y7S4 382 aa16.07■□□□□ 0.16
SSBP1-214ENST00000498107 BCAT2O15382 392 aaPredicted RBP16.07■□□□□ 0.16
SSBP1-214ENST00000498107 GFRA3O60609 400 aa16.07■□□□□ 0.16
SSBP1-214ENST00000498107 TM7SF2O76062 418 aa16.07■□□□□ 0.16
SSBP1-214ENST00000498107 EPOP01588 193 aa16.07■□□□□ 0.16
SSBP1-214ENST00000498107 TUBB4AP04350 444 aa16.07■□□□□ 0.16
SSBP1-214ENST00000498107 CASQ1P31415 396 aa16.07■□□□□ 0.16
SSBP1-214ENST00000498107 GRIA4P48058 902 aa16.07■□□□□ 0.16
SSBP1-214ENST00000498107 RACK1P63244 317 aaKnown RBP16.07■□□□□ 0.16
SSBP1-214ENST00000498107 SNX1Q13596 522 aa16.07■□□□□ 0.16
SSBP1-214ENST00000498107 PARP6Q2NL67 630 aa16.07■□□□□ 0.16
SSBP1-214ENST00000498107 TMEM259Q4ZIN3 620 aa16.07■□□□□ 0.16
SSBP1-214ENST00000498107 LRRC73Q5JTD7 316 aa16.07■□□□□ 0.16
SSBP1-214ENST00000498107 ALYREFQ86V81 257 aaKnown RBP16.07■□□□□ 0.16
SSBP1-214ENST00000498107 CCDC89Q8N998 374 aa16.07■□□□□ 0.16
SSBP1-214ENST00000498107 LPCAT1Q8NF37 534 aa16.07■□□□□ 0.16
SSBP1-214ENST00000498107 FAM174AQ8TBP5 190 aa16.07■□□□□ 0.16
SSBP1-214ENST00000498107 CCDC110Q8TBZ0 833 aa16.07■□□□□ 0.16
SSBP1-214ENST00000498107 RMDN1Q96DB5 314 aa16.07■□□□□ 0.16
SSBP1-214ENST00000498107 MCCC1Q96RQ3 725 aaPredicted RBP16.07■□□□□ 0.16
SSBP1-214ENST00000498107 SLC17A9Q9BYT1 436 aa16.07■□□□□ 0.16
SSBP1-214ENST00000498107 KCTD5Q9NXV2 234 aa16.07■□□□□ 0.16
SSBP1-214ENST00000498107 FEZ2Q9UHY8 353 aaPredicted RBP16.07■□□□□ 0.16
SSBP1-214ENST00000498107 ITM2BQ9Y287 266 aa16.07■□□□□ 0.16
SSBP1-214ENST00000498107 PIEZO1Q92508 2521 aa16.07■□□□□ 0.16
SSBP1-214ENST00000498107 RIF1Q5UIP0 2472 aaKnown RBP16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms