RNA–Protein interactions for RNA: ENST00000450940.5

USP40-207, Transcript of ubiquitin specific peptidase 40, humanhuman

TSL 3

Gene USP40, Length 670 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP40-207ENST00000450940 DUSP23Q9BVJ7 150 aa19.54■□□□□ 0.72
USP40-207ENST00000450940 USP29Q9HBJ7 922 aa19.54■□□□□ 0.72
USP40-207ENST00000450940 ACACAQ13085 2346 aa19.54■□□□□ 0.72
USP40-207ENST00000450940 LY6G6EA0A0G2JKS1 128 aa19.53■□□□□ 0.72
USP40-207ENST00000450940 K7ESM1 405 aa19.53■□□□□ 0.72
USP40-207ENST00000450940 FFAR2O15552 330 aa19.53■□□□□ 0.72
USP40-207ENST00000450940 PROSCO94903 275 aa19.53■□□□□ 0.72
USP40-207ENST00000450940 H2AFZP0C0S5 128 aa19.53■□□□□ 0.72
USP40-207ENST00000450940 C6P13671 934 aa19.53■□□□□ 0.72
USP40-207ENST00000450940 JUNDP17535 347 aa19.53■□□□□ 0.72
USP40-207ENST00000450940 SERPINB6P35237 376 aa19.53■□□□□ 0.72
USP40-207ENST00000450940 HNF1BP35680 557 aa19.53■□□□□ 0.72
USP40-207ENST00000450940 LIG3P49916 1009 aa19.53■□□□□ 0.72
USP40-207ENST00000450940 PEX5P50542 639 aa19.53■□□□□ 0.72
USP40-207ENST00000450940 SCNN1BP51168 640 aa19.53■□□□□ 0.72
USP40-207ENST00000450940 THOP1P52888 689 aa19.53■□□□□ 0.72
USP40-207ENST00000450940 CDH6P55285 790 aa19.53■□□□□ 0.72
USP40-207ENST00000450940 POLR2LP62875 67 aaKnown RBP19.53■□□□□ 0.72
USP40-207ENST00000450940 E2F1Q01094 437 aa19.53■□□□□ 0.72
USP40-207ENST00000450940 LRRC14Q15048 493 aa19.53■□□□□ 0.72
USP40-207ENST00000450940 IRF4Q15306 451 aa19.53■□□□□ 0.72
USP40-207ENST00000450940 HADHQ16836 314 aaKnown RBP19.53■□□□□ 0.72
USP40-207ENST00000450940 WSCD2Q2TBF2 565 aa19.53■□□□□ 0.72
USP40-207ENST00000450940 HS1BP3Q53T59 392 aa19.53■□□□□ 0.72
USP40-207ENST00000450940 CFAP58Q5T655 872 aa19.53■□□□□ 0.72
USP40-207ENST00000450940 MACC1Q6ZN28 852 aa19.53■□□□□ 0.72
USP40-207ENST00000450940 H2AFVQ71UI9 128 aa19.53■□□□□ 0.72
USP40-207ENST00000450940 LRRC49Q8IUZ0 686 aa19.53■□□□□ 0.72
USP40-207ENST00000450940 VSTM4Q8IW00 320 aa19.53■□□□□ 0.72
USP40-207ENST00000450940 BTN2A2Q8WVV5 523 aa19.53■□□□□ 0.72
USP40-207ENST00000450940 TSPY26PQ9H489 355 aa19.53■□□□□ 0.72
USP40-207ENST00000450940 LCMT1Q9UIC8 334 aa19.53■□□□□ 0.72
USP40-207ENST00000450940 PNMA8BQ9ULN7 279 aaPredicted RBP19.53■□□□□ 0.72
USP40-207ENST00000450940 U3KQA8 63 aa19.53■□□□□ 0.72
USP40-207ENST00000450940 APC2O95996 2303 aa19.53■□□□□ 0.72
USP40-207ENST00000450940 LRP4O75096 1905 aa19.53■□□□□ 0.72
USP40-207ENST00000450940 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP19.52■□□□□ 0.72
USP40-207ENST00000450940 TMEM110-MUSTN1A8MSY1 372 aa19.52■□□□□ 0.72
USP40-207ENST00000450940 TPP1O14773 563 aa19.52■□□□□ 0.72
USP40-207ENST00000450940 AQP9O43315 295 aa19.52■□□□□ 0.72
USP40-207ENST00000450940 HTRA2O43464 458 aaPredicted RBP19.52■□□□□ 0.72
USP40-207ENST00000450940 JUPP14923 745 aa19.52■□□□□ 0.72
USP40-207ENST00000450940 RALGDSQ12967 914 aa19.52■□□□□ 0.72
USP40-207ENST00000450940 PGBD5Q8N414 524 aa19.52■□□□□ 0.72
USP40-207ENST00000450940 MDM1Q8TC05 714 aa19.52■□□□□ 0.72
USP40-207ENST00000450940 APOLD1Q96LR9 279 aa19.52■□□□□ 0.72
USP40-207ENST00000450940 NUDCD1Q96RS6 583 aa19.52■□□□□ 0.72
USP40-207ENST00000450940 CTTNBP2NLQ9P2B4 639 aa19.52■□□□□ 0.72
USP40-207ENST00000450940 COQ6Q9Y2Z9 468 aa19.52■□□□□ 0.72
USP40-207ENST00000450940 A0A1W2PQ67 120 aa19.51■□□□□ 0.71
USP40-207ENST00000450940 SOCS5O75159 536 aa19.51■□□□□ 0.71
USP40-207ENST00000450940 NEBLO76041 1014 aa19.51■□□□□ 0.71
USP40-207ENST00000450940 CD48P09326 243 aa19.51■□□□□ 0.71
USP40-207ENST00000450940 CLDN6P56747 220 aa19.51■□□□□ 0.71
USP40-207ENST00000450940 DAB2P98082 770 aa19.51■□□□□ 0.71
USP40-207ENST00000450940 INSM1Q01101 510 aaPredicted RBP19.51■□□□□ 0.71
USP40-207ENST00000450940 MMRN1Q13201 1228 aa19.51■□□□□ 0.71
USP40-207ENST00000450940 DPYSL3Q14195 570 aa19.51■□□□□ 0.71
USP40-207ENST00000450940 KRT81Q14533 505 aa19.51■□□□□ 0.71
USP40-207ENST00000450940 PAFAH1B3Q15102 231 aaKnown RBP19.51■□□□□ 0.71
USP40-207ENST00000450940 RALGPS1Q5JS13 557 aa19.51■□□□□ 0.71
USP40-207ENST00000450940 HES3Q5TGS1 186 aa19.51■□□□□ 0.71
USP40-207ENST00000450940 ZCCHC8Q6NZY4 707 aaKnown RBP19.51■□□□□ 0.71
USP40-207ENST00000450940 LIPIQ6XZB0 460 aa19.51■□□□□ 0.71
USP40-207ENST00000450940 DPPA4Q7L190 304 aa19.51■□□□□ 0.71
USP40-207ENST00000450940 CPNE8Q86YQ8 564 aa19.51■□□□□ 0.71
USP40-207ENST00000450940 TEX26Q8N6G2 289 aa19.51■□□□□ 0.71
USP40-207ENST00000450940 CTNNBL1Q8WYA6 563 aaPredicted RBP19.51■□□□□ 0.71
USP40-207ENST00000450940 MGME1Q9BQP7 344 aa19.51■□□□□ 0.71
USP40-207ENST00000450940 PACSIN1Q9BY11 444 aa19.51■□□□□ 0.71
USP40-207ENST00000450940 SPASTQ9UBP0 616 aa19.51■□□□□ 0.71
USP40-207ENST00000450940 SALL4Q9UJQ4 1053 aa19.51■□□□□ 0.71
USP40-207ENST00000450940 ASXL3Q9C0F0 2248 aa19.51■□□□□ 0.71
USP40-207ENST00000450940 PRKCGP05129 697 aa19.5■□□□□ 0.71
USP40-207ENST00000450940 GP1BAP07359 652 aa19.5■□□□□ 0.71
USP40-207ENST00000450940 TMEM253P0C7T8 217 aa19.5■□□□□ 0.71
USP40-207ENST00000450940 DUSP3P51452 185 aaPredicted RBP19.5■□□□□ 0.71
USP40-207ENST00000450940 TARDBPQ13148 414 aaKnown RBP eCLIP19.5■□□□□ 0.71
USP40-207ENST00000450940 ZNF235Q14590 738 aa19.5■□□□□ 0.71
USP40-207ENST00000450940 PDK2Q15119 407 aa19.5■□□□□ 0.71
USP40-207ENST00000450940 ATP13A4Q4VNC1 1196 aa19.5■□□□□ 0.71
USP40-207ENST00000450940 PHACTR4Q8IZ21 702 aa19.5■□□□□ 0.71
USP40-207ENST00000450940 ATPAF2Q8N5M1 289 aa19.5■□□□□ 0.71
USP40-207ENST00000450940 DCBLD1Q8N8Z6 715 aa19.5■□□□□ 0.71
USP40-207ENST00000450940 PCDH19Q8TAB3 1148 aa19.5■□□□□ 0.71
USP40-207ENST00000450940 TCEAL2Q9H3H9 227 aaPredicted RBP19.5■□□□□ 0.71
USP40-207ENST00000450940 ABHD10Q9NUJ1 306 aa19.5■□□□□ 0.71
USP40-207ENST00000450940 ZNHIT6Q9NWK9 470 aaKnown RBP19.5■□□□□ 0.71
USP40-207ENST00000450940 NCKIPSDQ9NZQ3 722 aa19.5■□□□□ 0.71
USP40-207ENST00000450940 LMO7DNF2Z398 122 aa19.49■□□□□ 0.71
USP40-207ENST00000450940 LZTS3O60299 673 aaPredicted RBP19.49■□□□□ 0.71
USP40-207ENST00000450940 GCATO75600 419 aa19.49■□□□□ 0.71
USP40-207ENST00000450940 GM2AP17900 193 aa19.49■□□□□ 0.71
USP40-207ENST00000450940 MAN1A1P33908 653 aa19.49■□□□□ 0.71
USP40-207ENST00000450940 SSR1P43307 286 aaKnown RBP19.49■□□□□ 0.71
USP40-207ENST00000450940 TAS2R40P59535 323 aa19.49■□□□□ 0.71
USP40-207ENST00000450940 SEMG2Q02383 582 aa19.49■□□□□ 0.71
USP40-207ENST00000450940 CYP4F3Q08477 520 aa19.49■□□□□ 0.71
USP40-207ENST00000450940 GALNT2Q10471 571 aa19.49■□□□□ 0.71
USP40-207ENST00000450940 MTM1Q13496 603 aa19.49■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 82.2 ms