RNA–Protein interactions for RNA: ENST00000430669.6

PTCH1-208, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 8,232 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-208ENST00000430669 C1RP00736 705 aa11.6□□□□□ -0.55
PTCH1-208ENST00000430669 CATP04040 527 aaKnown RBP11.6□□□□□ -0.55
PTCH1-208ENST00000430669 ITGB6P18564 788 aa11.6□□□□□ -0.55
PTCH1-208ENST00000430669 LRPAP1P30533 357 aa11.6□□□□□ -0.55
PTCH1-208ENST00000430669 LRRC74AQ0VAA2 488 aa11.6□□□□□ -0.55
PTCH1-208ENST00000430669 OLFML1Q6UWY5 402 aa11.6□□□□□ -0.55
PTCH1-208ENST00000430669 LAYNQ6UX15 382 aa11.6□□□□□ -0.55
PTCH1-208ENST00000430669 CLEC20AQ6ZU45 233 aa11.6□□□□□ -0.55
PTCH1-208ENST00000430669 MYO19Q96H55 970 aa11.6□□□□□ -0.55
PTCH1-208ENST00000430669 COPG2Q9UBF2 871 aa11.6□□□□□ -0.55
PTCH1-208ENST00000430669 SLC2A4P14672 509 aa11.6□□□□□ -0.55
PTCH1-208ENST00000430669 SMAD3P84022 425 aaKnown RBP11.6□□□□□ -0.55
PTCH1-208ENST00000430669 IL27RAQ6UWB1 636 aa11.6□□□□□ -0.55
PTCH1-208ENST00000430669 FBXO22Q8NEZ5 403 aa11.6□□□□□ -0.55
PTCH1-208ENST00000430669 SMOC2Q9H3U7 446 aa11.6□□□□□ -0.55
PTCH1-208ENST00000430669 DPEP3Q9H4B8 488 aa11.6□□□□□ -0.55
PTCH1-208ENST00000430669 IMPAD1Q9NX62 359 aa11.6□□□□□ -0.55
PTCH1-208ENST00000430669 C1orf232A0A0U1RR37 186 aa11.6□□□□□ -0.55
PTCH1-208ENST00000430669 HNRNPCL2B2RXH8 293 aa11.6□□□□□ -0.55
PTCH1-208ENST00000430669 AVILO75366 819 aa11.6□□□□□ -0.55
PTCH1-208ENST00000430669 BPGMP07738 259 aa11.6□□□□□ -0.55
PTCH1-208ENST00000430669 BRCC3P46736 316 aa11.6□□□□□ -0.55
PTCH1-208ENST00000430669 CYTH1Q15438 398 aa11.6□□□□□ -0.55
PTCH1-208ENST00000430669 TRMT11Q7Z4G4 463 aaKnown RBP11.6□□□□□ -0.55
PTCH1-208ENST00000430669 BBS7Q8IWZ6 715 aa11.6□□□□□ -0.55
PTCH1-208ENST00000430669 ACTRT2Q8TDY3 377 aa11.6□□□□□ -0.55
PTCH1-208ENST00000430669 CXorf40AQ8TE69 158 aa11.6□□□□□ -0.55
PTCH1-208ENST00000430669 DDX1Q92499 740 aaKnown RBP11.6□□□□□ -0.55
PTCH1-208ENST00000430669 CNBD2Q96M20 576 aa11.6□□□□□ -0.55
PTCH1-208ENST00000430669 INTS10Q9NVR2 710 aaKnown RBP11.6□□□□□ -0.55
PTCH1-208ENST00000430669 C6orf203Q9P0P8 240 aaPredicted RBP11.6□□□□□ -0.55
PTCH1-208ENST00000430669 WEE1P30291 646 aa11.6□□□□□ -0.55
PTCH1-208ENST00000430669 HNRNPDQ14103 355 aaKnown RBP11.6□□□□□ -0.55
PTCH1-208ENST00000430669 TTC27Q6P3X3 843 aa11.6□□□□□ -0.55
PTCH1-208ENST00000430669 TPGS1Q6ZTW0 290 aa11.6□□□□□ -0.55
PTCH1-208ENST00000430669 HDAC10Q969S8 669 aa11.6□□□□□ -0.55
PTCH1-208ENST00000430669 OSBPL6Q9BZF3 934 aa11.6□□□□□ -0.55
PTCH1-208ENST00000430669 ZFYVE1Q9HBF4 777 aa11.6□□□□□ -0.55
PTCH1-208ENST00000430669 VWA7Q9Y334 891 aa11.6□□□□□ -0.55
PTCH1-208ENST00000430669 A0A0U1RQF3 1178 aa11.6□□□□□ -0.55
PTCH1-208ENST00000430669 PSMD12O00232 456 aaPredicted RBP11.6□□□□□ -0.55
PTCH1-208ENST00000430669 CXCL14O95715 111 aa11.6□□□□□ -0.55
PTCH1-208ENST00000430669 EPB42P16452 691 aa11.6□□□□□ -0.55
PTCH1-208ENST00000430669 BOP1Q14137 746 aaKnown RBP11.6□□□□□ -0.55
PTCH1-208ENST00000430669 TAPT1Q6NXT6 567 aa11.6□□□□□ -0.55
PTCH1-208ENST00000430669 GPRIN3Q6ZVF9 776 aa11.6□□□□□ -0.55
PTCH1-208ENST00000430669 IFNLR1Q8IU57 520 aaPredicted RBP11.6□□□□□ -0.55
PTCH1-208ENST00000430669 ZNF567Q8N184 647 aa11.6□□□□□ -0.55
PTCH1-208ENST00000430669 OR6Y1Q8NGX8 325 aa11.6□□□□□ -0.55
PTCH1-208ENST00000430669 SLC35F5Q8WV83 523 aa11.6□□□□□ -0.55
PTCH1-208ENST00000430669 TCF12Q99081 682 aa11.6□□□□□ -0.55
PTCH1-208ENST00000430669 AJAP1Q9UKB5 411 aaPredicted RBP11.6□□□□□ -0.55
PTCH1-208ENST00000430669 FBXO5Q9UKT4 447 aa11.6□□□□□ -0.55
PTCH1-208ENST00000430669 LRIG2O94898 1065 aa11.6□□□□□ -0.55
PTCH1-208ENST00000430669 AP1S1P61966 158 aa11.6□□□□□ -0.55
PTCH1-208ENST00000430669 FUT11Q495W5 492 aa11.6□□□□□ -0.55
PTCH1-208ENST00000430669 LRRC23Q53EV4 343 aaPredicted RBP11.6□□□□□ -0.55
PTCH1-208ENST00000430669 ZYG11AQ6WRX3 759 aa11.6□□□□□ -0.55
PTCH1-208ENST00000430669 SPATA19Q7Z5L4 167 aa11.6□□□□□ -0.55
PTCH1-208ENST00000430669 RELL1Q8IUW5 271 aa11.6□□□□□ -0.55
PTCH1-208ENST00000430669 OR8D1Q8WZ84 308 aa11.6□□□□□ -0.55
PTCH1-208ENST00000430669 MTF2Q9Y483 593 aaPredicted RBP11.6□□□□□ -0.55
PTCH1-208ENST00000430669 TACR2P21452 398 aa11.59□□□□□ -0.55
PTCH1-208ENST00000430669 LMO2P25791 158 aa11.59□□□□□ -0.55
PTCH1-208ENST00000430669 PRDX6P30041 224 aa11.59□□□□□ -0.55
PTCH1-208ENST00000430669 GBE1Q04446 702 aa11.59□□□□□ -0.55
PTCH1-208ENST00000430669 SNX30Q5VWJ9 437 aa11.59□□□□□ -0.55
PTCH1-208ENST00000430669 RTKNQ9BST9 563 aa11.59□□□□□ -0.55
PTCH1-208ENST00000430669 C10orf88Q9H8K7 445 aa11.59□□□□□ -0.55
PTCH1-208ENST00000430669 FBXO6Q9NRD1 293 aaPredicted RBP11.59□□□□□ -0.55
PTCH1-208ENST00000430669 TCAF1Q9Y4C2 921 aa11.59□□□□□ -0.55
PTCH1-208ENST00000430669 NDUFV1P49821 464 aa11.59□□□□□ -0.55
PTCH1-208ENST00000430669 LIMK2P53671 638 aa11.59□□□□□ -0.55
PTCH1-208ENST00000430669 GSCP56915 257 aaPredicted RBP11.59□□□□□ -0.55
PTCH1-208ENST00000430669 CACNG1Q06432 222 aa11.59□□□□□ -0.55
PTCH1-208ENST00000430669 PAGE2Q7Z2X7 111 aa11.59□□□□□ -0.55
PTCH1-208ENST00000430669 C10orf107Q8IVU9 208 aa11.59□□□□□ -0.55
PTCH1-208ENST00000430669 FAM126BQ8IXS8 530 aa11.59□□□□□ -0.55
PTCH1-208ENST00000430669 OVCA2Q8WZ82 227 aa11.59□□□□□ -0.55
PTCH1-208ENST00000430669 CCDC167Q9P0B6 97 aa11.59□□□□□ -0.55
PTCH1-208ENST00000430669 TCRBV7S2A1N4TA0A589 114 aa11.59□□□□□ -0.55
PTCH1-208ENST00000430669 EPN2O95208 641 aa11.59□□□□□ -0.55
PTCH1-208ENST00000430669 PFKMP08237 780 aa11.59□□□□□ -0.55
PTCH1-208ENST00000430669 GNA12Q03113 381 aa11.59□□□□□ -0.55
PTCH1-208ENST00000430669 BNIP2Q12982 314 aa11.59□□□□□ -0.55
PTCH1-208ENST00000430669 LMO3Q8TAP4 145 aa11.59□□□□□ -0.55
PTCH1-208ENST00000430669 C16orf70Q9BSU1 422 aa11.59□□□□□ -0.55
PTCH1-208ENST00000430669 CDH19Q9H159 772 aa11.59□□□□□ -0.55
PTCH1-208ENST00000430669 CLIC5Q9NZA1 410 aa11.59□□□□□ -0.55
PTCH1-208ENST00000430669 DNAJA2O60884 412 aa11.59□□□□□ -0.55
PTCH1-208ENST00000430669 DEAF1O75398 565 aaPredicted RBP11.59□□□□□ -0.55
PTCH1-208ENST00000430669 SNAI1O95863 264 aaPredicted RBP11.59□□□□□ -0.55
PTCH1-208ENST00000430669 TFEBP19484 476 aa11.59□□□□□ -0.55
PTCH1-208ENST00000430669 RAD23AP54725 363 aa11.59□□□□□ -0.55
PTCH1-208ENST00000430669 MARK2Q7KZI7 788 aaKnown RBP11.59□□□□□ -0.55
PTCH1-208ENST00000430669 CPA6Q8N4T0 437 aa11.59□□□□□ -0.55
PTCH1-208ENST00000430669 NAT8LQ8N9F0 302 aa11.59□□□□□ -0.55
PTCH1-208ENST00000430669 GPR88Q9GZN0 384 aa11.59□□□□□ -0.55
PTCH1-208ENST00000430669 SRRDQ9UH36 339 aa11.59□□□□□ -0.55
PTCH1-208ENST00000430669 TMCC3Q9ULS5 477 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 70.9 ms