RNA–Protein interactions for RNA: ENST00000414419.6

RFFL-204, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene RFFL, Length 559 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-204ENST00000414419 CHD8Q9HCK8 2581 aa11.29□□□□□ -0.6
RFFL-204ENST00000414419 SPTY2D1-AS1A0A0U1RR47 76 aa11.28□□□□□ -0.6
RFFL-204ENST00000414419 TTC24A2A3L6 582 aaPredicted RBP11.28□□□□□ -0.6
RFFL-204ENST00000414419 MATN3O15232 486 aa11.28□□□□□ -0.6
RFFL-204ENST00000414419 SOCS5O75159 536 aa11.28□□□□□ -0.6
RFFL-204ENST00000414419 MAP3K6O95382 1288 aa11.28□□□□□ -0.6
RFFL-204ENST00000414419 PEX11BO96011 259 aa11.28□□□□□ -0.6
RFFL-204ENST00000414419 KRT1P04264 644 aa11.28□□□□□ -0.6
RFFL-204ENST00000414419 PRKCGP05129 697 aa11.28□□□□□ -0.6
RFFL-204ENST00000414419 ELFN1P0C7U0 828 aa11.28□□□□□ -0.6
RFFL-204ENST00000414419 ALPPL2P10696 532 aa11.28□□□□□ -0.6
RFFL-204ENST00000414419 KRT10P13645 584 aa11.28□□□□□ -0.6
RFFL-204ENST00000414419 C6P13671 934 aa11.28□□□□□ -0.6
RFFL-204ENST00000414419 ZFXP17010 805 aaPredicted RBP11.28□□□□□ -0.6
RFFL-204ENST00000414419 DGKAP23743 735 aa11.28□□□□□ -0.6
RFFL-204ENST00000414419 CCNCP24863 283 aa11.28□□□□□ -0.6
RFFL-204ENST00000414419 LIG3P49916 1009 aa11.28□□□□□ -0.6
RFFL-204ENST00000414419 MAXP61244 160 aa11.28□□□□□ -0.6
RFFL-204ENST00000414419 YPEL5P62699 121 aa11.28□□□□□ -0.6
RFFL-204ENST00000414419 SEMG2Q02383 582 aa11.28□□□□□ -0.6
RFFL-204ENST00000414419 TCEAL1Q15170 157 aa11.28□□□□□ -0.6
RFFL-204ENST00000414419 ZNF542PQ5EBM4 170 aa11.28□□□□□ -0.6
RFFL-204ENST00000414419 LRRC38Q5VT99 294 aa11.28□□□□□ -0.6
RFFL-204ENST00000414419 RAB44Q7Z6P3 723 aaPredicted RBP11.28□□□□□ -0.6
RFFL-204ENST00000414419 ZSWIM9Q86XI8 627 aa11.28□□□□□ -0.6
RFFL-204ENST00000414419 TMTC1Q8IUR5 882 aa11.28□□□□□ -0.6
RFFL-204ENST00000414419 NDUFAF2Q8N183 169 aa11.28□□□□□ -0.6
RFFL-204ENST00000414419 PGBD5Q8N414 524 aa11.28□□□□□ -0.6
RFFL-204ENST00000414419 RAPGEF5Q92565 580 aa11.28□□□□□ -0.6
RFFL-204ENST00000414419 FAF2Q96CS3 445 aa11.28□□□□□ -0.6
RFFL-204ENST00000414419 ECHDC3Q96DC8 303 aa11.28□□□□□ -0.6
RFFL-204ENST00000414419 RNF157Q96PX1 679 aa11.28□□□□□ -0.6
RFFL-204ENST00000414419 PANX2Q96RD6 677 aa11.28□□□□□ -0.6
RFFL-204ENST00000414419 POLR1EQ9GZS1 481 aaKnown RBP11.28□□□□□ -0.6
RFFL-204ENST00000414419 NOD2Q9HC29 1040 aa11.28□□□□□ -0.6
RFFL-204ENST00000414419 COQ6Q9Y2Z9 468 aa11.28□□□□□ -0.6
RFFL-204ENST00000414419 TTLL3Q9Y4R7 772 aa11.28□□□□□ -0.6
RFFL-204ENST00000414419 PCDHGC4Q9Y5F7 938 aa11.28□□□□□ -0.6
RFFL-204ENST00000414419 PCDHA13Q9Y5I0 950 aa11.28□□□□□ -0.6
RFFL-204ENST00000414419 CFAP69A5D8W1 941 aa11.27□□□□□ -0.61
RFFL-204ENST00000414419 A8MX80 341 aa11.27□□□□□ -0.61
RFFL-204ENST00000414419 ZNF487B1APH4 448 aa11.27□□□□□ -0.61
RFFL-204ENST00000414419 TRAFD1O14545 582 aaPredicted RBP11.27□□□□□ -0.61
RFFL-204ENST00000414419 APOL1O14791 398 aa11.27□□□□□ -0.61
RFFL-204ENST00000414419 FFAR2O15552 330 aa11.27□□□□□ -0.61
RFFL-204ENST00000414419 PIAS2O75928 621 aa11.27□□□□□ -0.61
RFFL-204ENST00000414419 LCA5LO95447 670 aa11.27□□□□□ -0.61
RFFL-204ENST00000414419 CPP00450 1065 aa11.27□□□□□ -0.61
RFFL-204ENST00000414419 CYP2A6P11509 494 aaPredicted RBP11.27□□□□□ -0.61
RFFL-204ENST00000414419 CDK4P11802 303 aa11.27□□□□□ -0.61
RFFL-204ENST00000414419 CCNB1P14635 433 aa11.27□□□□□ -0.61
RFFL-204ENST00000414419 JUNDP17535 347 aa11.27□□□□□ -0.61
RFFL-204ENST00000414419 CR2P20023 1033 aa11.27□□□□□ -0.61
RFFL-204ENST00000414419 COMTP21964 271 aa11.27□□□□□ -0.61
RFFL-204ENST00000414419 CES1P23141 567 aa11.27□□□□□ -0.61
RFFL-204ENST00000414419 IGFALSP35858 605 aa11.27□□□□□ -0.61
RFFL-204ENST00000414419 MMP12P39900 470 aa11.27□□□□□ -0.61
RFFL-204ENST00000414419 PFN3P60673 137 aa11.27□□□□□ -0.61
RFFL-204ENST00000414419 FZD2Q14332 565 aa11.27□□□□□ -0.61
RFFL-204ENST00000414419 IRF4Q15306 451 aa11.27□□□□□ -0.61
RFFL-204ENST00000414419 DPPA4Q7L190 304 aa11.27□□□□□ -0.61
RFFL-204ENST00000414419 VSIG1Q86XK7 387 aa11.27□□□□□ -0.61
RFFL-204ENST00000414419 RFX6Q8HWS3 928 aa11.27□□□□□ -0.61
RFFL-204ENST00000414419 GALNT15Q8N3T1 639 aa11.27□□□□□ -0.61
RFFL-204ENST00000414419 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP11.27□□□□□ -0.61
RFFL-204ENST00000414419 TEX26Q8N6G2 289 aa11.27□□□□□ -0.61
RFFL-204ENST00000414419 PQLC3Q8N755 202 aa11.27□□□□□ -0.61
RFFL-204ENST00000414419 TP53I13Q8NBR0 393 aaPredicted RBP11.27□□□□□ -0.61
RFFL-204ENST00000414419 BTN2A2Q8WVV5 523 aa11.27□□□□□ -0.61
RFFL-204ENST00000414419 TSGA13Q96PP4 275 aa11.27□□□□□ -0.61
RFFL-204ENST00000414419 SEMA3CQ99985 751 aa11.27□□□□□ -0.61
RFFL-204ENST00000414419 MBNL1Q9NR56 388 aaKnown RBP11.27□□□□□ -0.61
RFFL-204ENST00000414419 EVA1BQ9NVM1 165 aa11.27□□□□□ -0.61
RFFL-204ENST00000414419 RBM22Q9NW64 420 aaKnown RBP eCLIP11.27□□□□□ -0.61
RFFL-204ENST00000414419 AMACRQ9UHK6 382 aa11.27□□□□□ -0.61
RFFL-204ENST00000414419 KLK13Q9UKR3 277 aa11.27□□□□□ -0.61
RFFL-204ENST00000414419 PHTF1Q9UMS5 762 aa11.27□□□□□ -0.61
RFFL-204ENST00000414419 WASF3Q9UPY6 502 aa11.27□□□□□ -0.61
RFFL-204ENST00000414419 MSRB2Q9Y3D2 182 aa11.27□□□□□ -0.61
RFFL-204ENST00000414419 HEY1Q9Y5J3 304 aa11.27□□□□□ -0.61
RFFL-204ENST00000414419 CEP295Q9C0D2 2601 aa11.26□□□□□ -0.61
RFFL-204ENST00000414419 MAP1BP46821 2468 aaKnown RBP11.26□□□□□ -0.61
RFFL-204ENST00000414419 HTRA2O43464 458 aaPredicted RBP11.26□□□□□ -0.61
RFFL-204ENST00000414419 RFPL3O75679 317 aa11.26□□□□□ -0.61
RFFL-204ENST00000414419 CSF2P04141 144 aa11.26□□□□□ -0.61
RFFL-204ENST00000414419 C1SP09871 688 aa11.26□□□□□ -0.61
RFFL-204ENST00000414419 NME1P15531 152 aaKnown RBP11.26□□□□□ -0.61
RFFL-204ENST00000414419 CKMT2P17540 419 aa11.26□□□□□ -0.61
RFFL-204ENST00000414419 CA4P22748 312 aa11.26□□□□□ -0.61
RFFL-204ENST00000414419 HTR1BP28222 390 aa11.26□□□□□ -0.61
RFFL-204ENST00000414419 PEX5P50542 639 aa11.26□□□□□ -0.61
RFFL-204ENST00000414419 EPHB1P54762 984 aa11.26□□□□□ -0.61
RFFL-204ENST00000414419 HADHBP55084 474 aaKnown RBP11.26□□□□□ -0.61
RFFL-204ENST00000414419 NAP1L1P55209 391 aaKnown RBP11.26□□□□□ -0.61
RFFL-204ENST00000414419 DAB2P98082 770 aa11.26□□□□□ -0.61
RFFL-204ENST00000414419 GBE1Q04446 702 aa11.26□□□□□ -0.61
RFFL-204ENST00000414419 AP1B1Q10567 949 aa11.26□□□□□ -0.61
RFFL-204ENST00000414419 DNAJC3Q13217 504 aa11.26□□□□□ -0.61
RFFL-204ENST00000414419 ZNF211Q13398 564 aaPredicted RBP11.26□□□□□ -0.61
RFFL-204ENST00000414419 ARHGEF7Q14155 803 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms