RNA–Protein interactions for RNA: ENST00000399804.5

SCAF4-202, Transcript of SR-related CTD associated factor 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCAF4, Length 4,127 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-202ENST00000399804 MCM3APO60318 1980 aa14.12□□□□□ -0.15
SCAF4-202ENST00000399804 E7ESA3 106 aa14.12□□□□□ -0.15
SCAF4-202ENST00000399804 CES1P23141 567 aa14.12□□□□□ -0.15
SCAF4-202ENST00000399804 TTPAP49638 278 aa14.12□□□□□ -0.15
SCAF4-202ENST00000399804 CDH13P55290 713 aa14.12□□□□□ -0.15
SCAF4-202ENST00000399804 POLR2LP62875 67 aaKnown RBP14.12□□□□□ -0.15
SCAF4-202ENST00000399804 DDX39BQ13838 428 aaKnown RBP14.12□□□□□ -0.15
SCAF4-202ENST00000399804 BOP1Q14137 746 aaKnown RBP14.12□□□□□ -0.15
SCAF4-202ENST00000399804 SWT1Q5T5J6 900 aaKnown RBP14.12□□□□□ -0.15
SCAF4-202ENST00000399804 LIPMQ5VYY2 423 aa14.12□□□□□ -0.15
SCAF4-202ENST00000399804 FAM171BQ6P995 826 aa14.12□□□□□ -0.15
SCAF4-202ENST00000399804 KLHDC9Q8NEP7 349 aa14.12□□□□□ -0.15
SCAF4-202ENST00000399804 SIKE1Q9BRV8 207 aa14.12□□□□□ -0.15
SCAF4-202ENST00000399804 TBC1D10AQ9BXI6 508 aa14.12□□□□□ -0.15
SCAF4-202ENST00000399804 CASS4Q9NQ75 786 aa14.12□□□□□ -0.15
SCAF4-202ENST00000399804 ATP5BP06576 529 aaKnown RBP14.11□□□□□ -0.15
SCAF4-202ENST00000399804 IGFBP6P24592 240 aaPredicted RBP14.11□□□□□ -0.15
SCAF4-202ENST00000399804 MC4RP32245 332 aa14.11□□□□□ -0.15
SCAF4-202ENST00000399804 MAPK8P45983 427 aa14.11□□□□□ -0.15
SCAF4-202ENST00000399804 KCNK10P57789 538 aa14.11□□□□□ -0.15
SCAF4-202ENST00000399804 TAS2R39P59534 338 aa14.11□□□□□ -0.15
SCAF4-202ENST00000399804 DPYSQ14117 519 aa14.11□□□□□ -0.15
SCAF4-202ENST00000399804 TTC7BQ86TV6 843 aa14.11□□□□□ -0.15
SCAF4-202ENST00000399804 NPWQ8N729 165 aa14.11□□□□□ -0.15
SCAF4-202ENST00000399804 TCF25Q9BQ70 676 aa14.11□□□□□ -0.15
SCAF4-202ENST00000399804 ELAC1Q9H777 363 aaKnown RBP14.11□□□□□ -0.15
SCAF4-202ENST00000399804 KIAA1522Q9P206 1035 aaPredicted RBP14.11□□□□□ -0.15
SCAF4-202ENST00000399804 SCOCQ9UIL1 159 aa14.11□□□□□ -0.15
SCAF4-202ENST00000399804 HDAC3O15379 428 aa14.11□□□□□ -0.15
SCAF4-202ENST00000399804 KATNA1O75449 491 aa14.11□□□□□ -0.15
SCAF4-202ENST00000399804 ZNF460Q14592 562 aa14.11□□□□□ -0.15
SCAF4-202ENST00000399804 USP45Q70EL2 814 aa14.11□□□□□ -0.15
SCAF4-202ENST00000399804 GPSM1Q86YR5 675 aa14.11□□□□□ -0.15
SCAF4-202ENST00000399804 PLD4Q96BZ4 506 aa14.11□□□□□ -0.15
SCAF4-202ENST00000399804 CYP2S1Q96SQ9 504 aa14.11□□□□□ -0.15
SCAF4-202ENST00000399804 C11orf49Q9H6J7 331 aa14.11□□□□□ -0.15
SCAF4-202ENST00000399804 NEDD8-MDP1E9PL57 170 aa14.11□□□□□ -0.15
SCAF4-202ENST00000399804 INSIG1O15503 277 aa14.11□□□□□ -0.15
SCAF4-202ENST00000399804 TBC1D4O60343 1298 aa14.11□□□□□ -0.15
SCAF4-202ENST00000399804 MYO1DO94832 1006 aa14.11□□□□□ -0.15
SCAF4-202ENST00000399804 EPHA3P29320 983 aa14.11□□□□□ -0.15
SCAF4-202ENST00000399804 PBLDP30039 288 aaPredicted RBP14.11□□□□□ -0.15
SCAF4-202ENST00000399804 FLOT2Q14254 428 aa14.11□□□□□ -0.15
SCAF4-202ENST00000399804 TRIP10Q15642 601 aa14.11□□□□□ -0.15
SCAF4-202ENST00000399804 STK40Q8N2I9 435 aa14.11□□□□□ -0.15
SCAF4-202ENST00000399804 PIP4K2CQ8TBX8 421 aa14.11□□□□□ -0.15
SCAF4-202ENST00000399804 SEMA4BQ9NPR2 832 aaPredicted RBP14.11□□□□□ -0.15
SCAF4-202ENST00000399804 RNF103-CHMP3A0A140T963 221 aa14.1□□□□□ -0.15
SCAF4-202ENST00000399804 A0A1W2PRU2 124 aa14.1□□□□□ -0.15
SCAF4-202ENST00000399804 TK2O00142 265 aa14.1□□□□□ -0.15
SCAF4-202ENST00000399804 PITPNM1O00562 1244 aa14.1□□□□□ -0.15
SCAF4-202ENST00000399804 ATP6V1G2O95670 118 aa14.1□□□□□ -0.15
SCAF4-202ENST00000399804 ESRRBO95718 433 aa14.1□□□□□ -0.15
SCAF4-202ENST00000399804 PROCP04070 461 aa14.1□□□□□ -0.15
SCAF4-202ENST00000399804 CSF2RAP15509 400 aa14.1□□□□□ -0.15
SCAF4-202ENST00000399804 PRKCHP24723 683 aa14.1□□□□□ -0.15
SCAF4-202ENST00000399804 ADAM17P78536 824 aa14.1□□□□□ -0.15
SCAF4-202ENST00000399804 ELF3P78545 371 aaPredicted RBP14.1□□□□□ -0.15
SCAF4-202ENST00000399804 SCAPQ12770 1279 aa14.1□□□□□ -0.15
SCAF4-202ENST00000399804 HECTD2Q5U5R9 776 aa14.1□□□□□ -0.15
SCAF4-202ENST00000399804 KIAA0319Q5VV43 1072 aa14.1□□□□□ -0.15
SCAF4-202ENST00000399804 KRT80Q6KB66 452 aa14.1□□□□□ -0.15
SCAF4-202ENST00000399804 SNX32Q86XE0 403 aa14.1□□□□□ -0.15
SCAF4-202ENST00000399804 NMUR2Q9GZQ4 415 aa14.1□□□□□ -0.15
SCAF4-202ENST00000399804 EPB41L4BQ9H329 900 aa14.1□□□□□ -0.15
SCAF4-202ENST00000399804 WDR6Q9NNW5 1121 aaKnown RBP14.1□□□□□ -0.15
SCAF4-202ENST00000399804 FCF1Q9Y324 198 aaKnown RBP14.1□□□□□ -0.15
SCAF4-202ENST00000399804 SLC9A3R1O14745 358 aaPredicted RBP14.1□□□□□ -0.15
SCAF4-202ENST00000399804 CCNT2O60583 730 aaKnown RBP14.1□□□□□ -0.15
SCAF4-202ENST00000399804 RPP40O75818 363 aaKnown RBP14.1□□□□□ -0.15
SCAF4-202ENST00000399804 USP46P62068 366 aa14.1□□□□□ -0.15
SCAF4-202ENST00000399804 MPPE1Q53F39 396 aa14.1□□□□□ -0.15
SCAF4-202ENST00000399804 RASIP1Q5U651 963 aa14.1□□□□□ -0.15
SCAF4-202ENST00000399804 FAM151BQ6UXP7 276 aa14.1□□□□□ -0.15
SCAF4-202ENST00000399804 RPAINQ86UA6 219 aa14.1□□□□□ -0.15
SCAF4-202ENST00000399804 RNF148Q8N7C7 305 aa14.1□□□□□ -0.15
SCAF4-202ENST00000399804 RPL10LQ96L21 214 aaKnown RBP14.1□□□□□ -0.15
SCAF4-202ENST00000399804 ACOX2Q99424 681 aa14.1□□□□□ -0.15
SCAF4-202ENST00000399804 SPATA16Q9BXB7 569 aa14.1□□□□□ -0.15
SCAF4-202ENST00000399804 RAP2CQ9Y3L5 183 aa14.1□□□□□ -0.15
SCAF4-202ENST00000399804 PSAT1Q9Y617 370 aa14.1□□□□□ -0.15
SCAF4-202ENST00000399804 NCALDP61601 193 aa14.1□□□□□ -0.15
SCAF4-202ENST00000399804 ILF2Q12905 390 aaKnown RBP14.1□□□□□ -0.15
SCAF4-202ENST00000399804 UBAP2LQ14157 1087 aaKnown RBP14.1□□□□□ -0.15
SCAF4-202ENST00000399804 CAPRIN1Q14444 709 aaKnown RBP14.1□□□□□ -0.15
SCAF4-202ENST00000399804 PM20D1Q6GTS8 502 aa14.1□□□□□ -0.15
SCAF4-202ENST00000399804 TMCO2Q7Z6W1 182 aaPredicted RBP14.1□□□□□ -0.15
SCAF4-202ENST00000399804 CLNKQ7Z7G1 428 aa14.1□□□□□ -0.15
SCAF4-202ENST00000399804 ACTR8Q9H981 624 aa14.1□□□□□ -0.15
SCAF4-202ENST00000399804 MTMR10Q9NXD2 777 aa14.1□□□□□ -0.15
SCAF4-202ENST00000399804 CCDC167Q9P0B6 97 aa14.1□□□□□ -0.15
SCAF4-202ENST00000399804 HSPA14Q0VDF9 509 aa14.09□□□□□ -0.15
SCAF4-202ENST00000399804 FOXD4Q12950 439 aaPredicted RBP14.09□□□□□ -0.15
SCAF4-202ENST00000399804 MSLNQ13421 630 aaPredicted RBP14.09□□□□□ -0.15
SCAF4-202ENST00000399804 PPIGQ13427 754 aaKnown RBP eCLIP14.09□□□□□ -0.158e-9■■□□□ 13.7
SCAF4-202ENST00000399804 XKR4Q5GH76 650 aa14.09□□□□□ -0.15
SCAF4-202ENST00000399804 LIN28BQ6ZN17 250 aaKnown RBP eCLIP14.09□□□□□ -0.156e-6■■■□□ 19.1
SCAF4-202ENST00000399804 KIAA0408Q6ZU52 694 aa14.09□□□□□ -0.15
SCAF4-202ENST00000399804 NKAPQ8N5F7 415 aaKnown RBP14.09□□□□□ -0.15
SCAF4-202ENST00000399804 KYQ8NBH2 561 aa14.09□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms