RNA–Protein interactions for RNA: ENST00000381753.8

LIMCH1-202, Transcript of LIM and calponin homology domains 1, humanhuman

TSL 1 (best) BASIC

Gene LIMCH1, Length 5,705 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMCH1-202ENST00000381753 ANKRD63C9JTQ0 380 aa9.25□□□□□ -0.93
LIMCH1-202ENST00000381753 THEGLP0DJG4 465 aa9.25□□□□□ -0.93
LIMCH1-202ENST00000381753 CLNS1AP54105 237 aaKnown RBP9.25□□□□□ -0.93
LIMCH1-202ENST00000381753 PSMD4P55036 377 aaKnown RBP9.25□□□□□ -0.93
LIMCH1-202ENST00000381753 ANTXR2P58335 489 aa9.25□□□□□ -0.93
LIMCH1-202ENST00000381753 ARHGAP8P85298 464 aa9.25□□□□□ -0.93
LIMCH1-202ENST00000381753 ZNF542PQ5EBM4 170 aa9.25□□□□□ -0.93
LIMCH1-202ENST00000381753 C3orf38Q5JPI3 329 aa9.25□□□□□ -0.93
LIMCH1-202ENST00000381753 KRT80Q6KB66 452 aa9.25□□□□□ -0.93
LIMCH1-202ENST00000381753 CCDC137Q6PK04 289 aaKnown RBP9.25□□□□□ -0.93
LIMCH1-202ENST00000381753 ALYREFQ86V81 257 aaKnown RBP9.25□□□□□ -0.93
LIMCH1-202ENST00000381753 CNPY4Q8N129 248 aa9.25□□□□□ -0.93
LIMCH1-202ENST00000381753 MPP5Q8N3R9 675 aa9.25□□□□□ -0.93
LIMCH1-202ENST00000381753 SLC35G2Q8TBE7 412 aa9.25□□□□□ -0.93
LIMCH1-202ENST00000381753 FBRSQ9HAH7 460 aa9.25□□□□□ -0.93
LIMCH1-202ENST00000381753 ACAD8Q9UKU7 415 aa9.25□□□□□ -0.93
LIMCH1-202ENST00000381753 AURKCQ9UQB9 309 aa9.25□□□□□ -0.93
LIMCH1-202ENST00000381753 HPSEQ9Y251 543 aa9.25□□□□□ -0.93
LIMCH1-202ENST00000381753 GPR37L1O60883 481 aa9.25□□□□□ -0.93
LIMCH1-202ENST00000381753 SPAG7O75391 227 aa9.25□□□□□ -0.93
LIMCH1-202ENST00000381753 NDUFA10O95299 355 aa9.25□□□□□ -0.93
LIMCH1-202ENST00000381753 BUD31P41223 144 aaPredicted RBP9.25□□□□□ -0.93
LIMCH1-202ENST00000381753 FOLR3P41439 243 aa9.25□□□□□ -0.93
LIMCH1-202ENST00000381753 AFTPHQ6ULP2 937 aa9.25□□□□□ -0.93
LIMCH1-202ENST00000381753 AMZ2Q86W34 360 aa9.25□□□□□ -0.93
LIMCH1-202ENST00000381753 ASZ1Q8WWH4 475 aa9.25□□□□□ -0.93
LIMCH1-202ENST00000381753 DACH2Q96NX9 599 aa9.25□□□□□ -0.93
LIMCH1-202ENST00000381753 INTS9Q9NV88 658 aaKnown RBP9.25□□□□□ -0.93
LIMCH1-202ENST00000381753 KLRF1Q9NZS2 232 aa9.25□□□□□ -0.93
LIMCH1-202ENST00000381753 TMCC3Q9ULS5 477 aa9.25□□□□□ -0.93
LIMCH1-202ENST00000381753 GLYATL1P3A0A0U1RQE8 302 aa9.24□□□□□ -0.93
LIMCH1-202ENST00000381753 WASHC1A8K0Z3 465 aa9.24□□□□□ -0.93
LIMCH1-202ENST00000381753 B2RBV5 119 aa9.24□□□□□ -0.93
LIMCH1-202ENST00000381753 WASH3PC4AMC7 463 aa9.24□□□□□ -0.93
LIMCH1-202ENST00000381753 GOLGA8KD6RF30 607 aa9.24□□□□□ -0.93
LIMCH1-202ENST00000381753 YKT6O15498 198 aa9.24□□□□□ -0.93
LIMCH1-202ENST00000381753 IRAK2O43187 625 aa9.24□□□□□ -0.93
LIMCH1-202ENST00000381753 TGM5O43548 720 aa9.24□□□□□ -0.93
LIMCH1-202ENST00000381753 BUD23O43709 281 aaKnown RBP9.24□□□□□ -0.93
LIMCH1-202ENST00000381753 MT-CYBP00156 380 aaPredicted RBP9.24□□□□□ -0.93
LIMCH1-202ENST00000381753 KRT16P08779 473 aa9.24□□□□□ -0.93
LIMCH1-202ENST00000381753 GDI2P50395 445 aaKnown RBP9.24□□□□□ -0.93
LIMCH1-202ENST00000381753 CYP4F2P78329 520 aa9.24□□□□□ -0.93
LIMCH1-202ENST00000381753 ACAP1Q15027 740 aa9.24□□□□□ -0.93
LIMCH1-202ENST00000381753 WASH2PQ6VEQ5 465 aa9.24□□□□□ -0.93
LIMCH1-202ENST00000381753 PLXDC1Q8IUK5 500 aa9.24□□□□□ -0.93
LIMCH1-202ENST00000381753 UNC5BQ8IZJ1 945 aa9.24□□□□□ -0.93
LIMCH1-202ENST00000381753 GALNT15Q8N3T1 639 aa9.24□□□□□ -0.93
LIMCH1-202ENST00000381753 NAT6Q93015 286 aa9.24□□□□□ -0.93
LIMCH1-202ENST00000381753 VPS33AQ96AX1 596 aa9.24□□□□□ -0.93
LIMCH1-202ENST00000381753 ELMO3Q96BJ8 720 aa9.24□□□□□ -0.93
LIMCH1-202ENST00000381753 MTFMTQ96DP5 389 aaKnown RBP9.24□□□□□ -0.93
LIMCH1-202ENST00000381753 SNX27Q96L92 541 aa9.24□□□□□ -0.93
LIMCH1-202ENST00000381753 RBBP8Q99708 897 aa9.24□□□□□ -0.93
LIMCH1-202ENST00000381753 BCL2L14Q9BZR8 327 aa9.24□□□□□ -0.93
LIMCH1-202ENST00000381753 TWSG1Q9GZX9 223 aa9.24□□□□□ -0.93
LIMCH1-202ENST00000381753 MAT2BQ9NZL9 334 aa9.24□□□□□ -0.93
LIMCH1-202ENST00000381753 OPTCQ9UBM4 332 aa9.24□□□□□ -0.93
LIMCH1-202ENST00000381753 CHMP2BQ9UQN3 213 aa9.24□□□□□ -0.93
LIMCH1-202ENST00000381753 MAN1A2O60476 641 aa9.24□□□□□ -0.93
LIMCH1-202ENST00000381753 F2P00734 622 aa9.24□□□□□ -0.93
LIMCH1-202ENST00000381753 RRM2P31350 389 aa9.24□□□□□ -0.93
LIMCH1-202ENST00000381753 PREPP48147 710 aa9.24□□□□□ -0.93
LIMCH1-202ENST00000381753 RRADP55042 308 aa9.24□□□□□ -0.93
LIMCH1-202ENST00000381753 ESRRGP62508 458 aa9.24□□□□□ -0.93
LIMCH1-202ENST00000381753 PLIN5Q00G26 463 aa9.24□□□□□ -0.93
LIMCH1-202ENST00000381753 HSP90AA5PQ58FG0 334 aa9.24□□□□□ -0.93
LIMCH1-202ENST00000381753 RALGPS2Q86X27 583 aaPredicted RBP9.24□□□□□ -0.93
LIMCH1-202ENST00000381753 MSANTD3Q96H12 275 aa9.24□□□□□ -0.93
LIMCH1-202ENST00000381753 SUSD3Q96L08 255 aa9.24□□□□□ -0.93
LIMCH1-202ENST00000381753 OR2AG1Q9H205 316 aa9.24□□□□□ -0.93
LIMCH1-202ENST00000381753 METTL7AQ9H8H3 244 aa9.24□□□□□ -0.93
LIMCH1-202ENST00000381753 MRPL40Q9NQ50 206 aaKnown RBP9.24□□□□□ -0.93
LIMCH1-202ENST00000381753 KRT84Q9NSB2 600 aa9.24□□□□□ -0.93
LIMCH1-202ENST00000381753 ZNF214Q9UL59 606 aaPredicted RBP9.24□□□□□ -0.93
LIMCH1-202ENST00000381753 UBR1Q8IWV7 1749 aa9.24□□□□□ -0.93
LIMCH1-202ENST00000381753 HYKKA2RU49 373 aa9.24□□□□□ -0.93
LIMCH1-202ENST00000381753 OR2AG2A6NM03 316 aa9.24□□□□□ -0.93
LIMCH1-202ENST00000381753 MAP2K7O14733 419 aa9.24□□□□□ -0.93
LIMCH1-202ENST00000381753 WNT9AO14904 365 aa9.24□□□□□ -0.93
LIMCH1-202ENST00000381753 ABCB7O75027 752 aa9.24□□□□□ -0.93
LIMCH1-202ENST00000381753 ITGBL1O95965 494 aaPredicted RBP9.24□□□□□ -0.93
LIMCH1-202ENST00000381753 HBQ1P09105 142 aa9.24□□□□□ -0.93
LIMCH1-202ENST00000381753 DRD4P21917 467 aa9.24□□□□□ -0.93
LIMCH1-202ENST00000381753 CAPZA1P52907 286 aa9.24□□□□□ -0.93
LIMCH1-202ENST00000381753 DLG4P78352 724 aa9.24□□□□□ -0.93
LIMCH1-202ENST00000381753 EXOSC10Q01780 885 aaKnown RBP9.24□□□□□ -0.93
LIMCH1-202ENST00000381753 PARP15Q460N3 678 aa9.24□□□□□ -0.93
LIMCH1-202ENST00000381753 HEATR4Q86WZ0 1026 aa9.24□□□□□ -0.93
LIMCH1-202ENST00000381753 NRBF2Q96F24 287 aa9.24□□□□□ -0.93
LIMCH1-202ENST00000381753 RAB11FIP5Q9BXF6 653 aa9.24□□□□□ -0.93
LIMCH1-202ENST00000381753 LRRC4CQ9HCJ2 640 aa9.24□□□□□ -0.93
LIMCH1-202ENST00000381753 NAALADL1Q9UQQ1 740 aa9.24□□□□□ -0.93
LIMCH1-202ENST00000381753 RBM7Q9Y580 266 aaKnown RBP9.24□□□□□ -0.93
LIMCH1-202ENST00000381753 BTN3A1O00481 513 aa9.24□□□□□ -0.93
LIMCH1-202ENST00000381753 POLR1CO15160 346 aaPredicted RBP9.24□□□□□ -0.93
LIMCH1-202ENST00000381753 LPOP22079 712 aaPredicted RBP9.24□□□□□ -0.93
LIMCH1-202ENST00000381753 BDH1Q02338 343 aa9.24□□□□□ -0.93
LIMCH1-202ENST00000381753 DSC1Q08554 894 aa9.24□□□□□ -0.93
LIMCH1-202ENST00000381753 RCAN2Q14206 197 aa9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms