RNA–Protein interactions for RNA: ENST00000360019.7

CLN3-206, Transcript of CLN3, battenin, humanhuman

TSL 2 BASIC

Gene CLN3, Length 1,840 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN3-206ENST00000360019 CA4P22748 312 aa18.73■□□□□ 0.59
CLN3-206ENST00000360019 SLC8A1P32418 973 aa18.73■□□□□ 0.59
CLN3-206ENST00000360019 EIF2DP41214 584 aaKnown RBP18.73■□□□□ 0.59
CLN3-206ENST00000360019 MSH2P43246 934 aa18.73■□□□□ 0.59
CLN3-206ENST00000360019 RASA2Q15283 850 aa18.73■□□□□ 0.59
CLN3-206ENST00000360019 QPCTQ16769 361 aa18.73■□□□□ 0.59
CLN3-206ENST00000360019 SKIDA1Q1XH10 827 aa18.73■□□□□ 0.59
CLN3-206ENST00000360019 AAK1Q2M2I8 961 aa18.73■□□□□ 0.59
CLN3-206ENST00000360019 ARMC3Q5W041 872 aa18.73■□□□□ 0.59
CLN3-206ENST00000360019 ADGRD1Q6QNK2 874 aa18.73■□□□□ 0.59
CLN3-206ENST00000360019 LRRC6Q86X45 466 aa18.73■□□□□ 0.59
CLN3-206ENST00000360019 PPM1EQ8WY54 764 aa18.73■□□□□ 0.59
CLN3-206ENST00000360019 PKNOX2Q96KN3 472 aa18.73■□□□□ 0.59
CLN3-206ENST00000360019 ADGRE3Q9BY15 652 aa18.73■□□□□ 0.59
CLN3-206ENST00000360019 ATP13A3Q9H7F0 1226 aa18.73■□□□□ 0.59
CLN3-206ENST00000360019 UGT1A7Q9HAW7 530 aa18.73■□□□□ 0.59
CLN3-206ENST00000360019 UGT1A10Q9HAW8 530 aa18.73■□□□□ 0.59
CLN3-206ENST00000360019 UGT1A8Q9HAW9 530 aa18.73■□□□□ 0.59
CLN3-206ENST00000360019 PPANQ9NQ55 473 aaKnown RBP18.73■□□□□ 0.59
CLN3-206ENST00000360019 PSMC3IPQ9P2W1 217 aaPredicted RBP18.73■□□□□ 0.59
CLN3-206ENST00000360019 SOCS5O75159 536 aa18.72■□□□□ 0.59
CLN3-206ENST00000360019 ARNTP27540 789 aa18.72■□□□□ 0.59
CLN3-206ENST00000360019 NNMTP40261 264 aa18.72■□□□□ 0.59
CLN3-206ENST00000360019 SOX9P48436 509 aa18.72■□□□□ 0.59
CLN3-206ENST00000360019 EIF4HQ15056 248 aaKnown RBP18.72■□□□□ 0.59
CLN3-206ENST00000360019 TMED2Q15363 201 aa18.72■□□□□ 0.59
CLN3-206ENST00000360019 CNGA3Q16281 694 aa18.72■□□□□ 0.59
CLN3-206ENST00000360019 ARMC12Q5T9G4 340 aa18.72■□□□□ 0.59
CLN3-206ENST00000360019 PLPP6Q8IY26 295 aa18.72■□□□□ 0.59
CLN3-206ENST00000360019 CHST14Q8NCH0 376 aa18.72■□□□□ 0.59
CLN3-206ENST00000360019 COL6A3P12111 3177 aa18.72■□□□□ 0.59
CLN3-206ENST00000360019 MUC22E2RYF6 1773 aaPredicted RBP18.72■□□□□ 0.59
CLN3-206ENST00000360019 FOXO6A8MYZ6 492 aa18.72■□□□□ 0.59
CLN3-206ENST00000360019 FAM155BO75949 473 aa18.72■□□□□ 0.59
CLN3-206ENST00000360019 FOSL2P15408 326 aa18.72■□□□□ 0.59
CLN3-206ENST00000360019 ARCN1P48444 511 aaKnown RBP18.72■□□□□ 0.59
CLN3-206ENST00000360019 PTPRRQ15256 657 aa18.72■□□□□ 0.59
CLN3-206ENST00000360019 TSTD2Q5T7W7 516 aa18.72■□□□□ 0.59
CLN3-206ENST00000360019 ZNF449Q6P9G9 518 aa18.72■□□□□ 0.59
CLN3-206ENST00000360019 ZSWIM9Q86XI8 627 aa18.72■□□□□ 0.59
CLN3-206ENST00000360019 ZNF366Q8N895 744 aa18.72■□□□□ 0.59
CLN3-206ENST00000360019 OR13J1Q8NGT2 312 aa18.72■□□□□ 0.59
CLN3-206ENST00000360019 BRSK1Q8TDC3 778 aa18.72■□□□□ 0.59
CLN3-206ENST00000360019 PIH1D2Q8WWB5 315 aa18.72■□□□□ 0.59
CLN3-206ENST00000360019 TUBGCP5Q96RT8 1024 aa18.72■□□□□ 0.59
CLN3-206ENST00000360019 CPEB1Q9BZB8 566 aaKnown RBP18.72■□□□□ 0.59
CLN3-206ENST00000360019 MTG2Q9H4K7 406 aa18.72■□□□□ 0.59
CLN3-206ENST00000360019 ZDHHC6Q9H6R6 413 aa18.72■□□□□ 0.59
CLN3-206ENST00000360019 C20orf96Q9NUD7 363 aaPredicted RBP18.72■□□□□ 0.59
CLN3-206ENST00000360019 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP18.72■□□□□ 0.59
CLN3-206ENST00000360019 KCTD3Q9Y597 815 aa18.72■□□□□ 0.59
CLN3-206ENST00000360019 ARL5AQ9Y689 179 aa18.72■□□□□ 0.59
CLN3-206ENST00000360019 TBC1D3BA6NDS4 549 aa18.71■□□□□ 0.59
CLN3-206ENST00000360019 ANTXRLA6NF34 631 aa18.71■□□□□ 0.59
CLN3-206ENST00000360019 PALM2-AKAP2B1ALY0 433 aaPredicted RBP18.71■□□□□ 0.59
CLN3-206ENST00000360019 WASH3PC4AMC7 463 aa18.71■□□□□ 0.59
CLN3-206ENST00000360019 AURKAO14965 403 aa18.71■□□□□ 0.59
CLN3-206ENST00000360019 KAT7O95251 611 aa18.71■□□□□ 0.59
CLN3-206ENST00000360019 POP4O95707 220 aaKnown RBP18.71■□□□□ 0.59
CLN3-206ENST00000360019 SERPINA4P29622 427 aa18.71■□□□□ 0.59
CLN3-206ENST00000360019 MAGOHP61326 146 aaKnown RBP18.71■□□□□ 0.59
CLN3-206ENST00000360019 MGAT5Q09328 741 aa18.71■□□□□ 0.59
CLN3-206ENST00000360019 MARK2Q7KZI7 788 aaKnown RBP18.71■□□□□ 0.59
CLN3-206ENST00000360019 KCNMB4Q86W47 210 aa18.71■□□□□ 0.59
CLN3-206ENST00000360019 SLC26A11Q86WA9 606 aa18.71■□□□□ 0.59
CLN3-206ENST00000360019 MDGA1Q8NFP4 955 aa18.71■□□□□ 0.59
CLN3-206ENST00000360019 FBRSL1Q9HCM7 1045 aaKnown RBP18.71■□□□□ 0.59
CLN3-206ENST00000360019 PLA2G4CQ9UP65 541 aa18.71■□□□□ 0.59
CLN3-206ENST00000360019 TICRRQ7Z2Z1 1910 aa18.71■□□□□ 0.59
CLN3-206ENST00000360019 GOLGA8TH3BQL2 631 aa18.7■□□□□ 0.58
CLN3-206ENST00000360019 TIMM44O43615 452 aa18.7■□□□□ 0.58
CLN3-206ENST00000360019 PAPSS2O95340 614 aaPredicted RBP18.7■□□□□ 0.58
CLN3-206ENST00000360019 INHBAP08476 426 aa18.7■□□□□ 0.58
CLN3-206ENST00000360019 GRIA4P48058 902 aa18.7■□□□□ 0.58
CLN3-206ENST00000360019 ST8SIA6P61647 398 aa18.7■□□□□ 0.58
CLN3-206ENST00000360019 HSP90AA5PQ58FG0 334 aa18.7■□□□□ 0.58
CLN3-206ENST00000360019 MICALCLQ6ZW33 695 aa18.7■□□□□ 0.58
CLN3-206ENST00000360019 RASSF3Q86WH2 238 aa18.7■□□□□ 0.58
CLN3-206ENST00000360019 CDKL2Q92772 493 aa18.7■□□□□ 0.58
CLN3-206ENST00000360019 PTPRN2Q92932 1015 aa18.7■□□□□ 0.58
CLN3-206ENST00000360019 ECHDC3Q96DC8 303 aa18.7■□□□□ 0.58
CLN3-206ENST00000360019 HCN2Q9UL51 889 aa18.7■□□□□ 0.58
CLN3-206ENST00000360019 PSAT1Q9Y617 370 aa18.7■□□□□ 0.58
CLN3-206ENST00000360019 POLR3GO15318 223 aaPredicted RBP18.7■□□□□ 0.58
CLN3-206ENST00000360019 BUD23O43709 281 aaKnown RBP18.7■□□□□ 0.58
CLN3-206ENST00000360019 VAPBO95292 243 aa18.7■□□□□ 0.58
CLN3-206ENST00000360019 EPHB1P54762 984 aa18.7■□□□□ 0.58
CLN3-206ENST00000360019 PTPRCAPQ14761 206 aa18.7■□□□□ 0.58
CLN3-206ENST00000360019 TEDDM1Q5T9Z0 273 aa18.7■□□□□ 0.58
CLN3-206ENST00000360019 KIAA0930Q6ICG6 404 aaPredicted RBP18.7■□□□□ 0.58
CLN3-206ENST00000360019 GPR153Q6NV75 609 aa18.7■□□□□ 0.58
CLN3-206ENST00000360019 NLRP9Q7RTR0 991 aa18.7■□□□□ 0.58
CLN3-206ENST00000360019 GLT6D1Q7Z4J2 308 aa18.7■□□□□ 0.58
CLN3-206ENST00000360019 MZB1Q8WU39 189 aa18.7■□□□□ 0.58
CLN3-206ENST00000360019 AGAP2Q99490 1192 aa18.7■□□□□ 0.58
CLN3-206ENST00000360019 PHF7Q9BWX1 381 aaPredicted RBP18.7■□□□□ 0.58
CLN3-206ENST00000360019 KCNK12Q9HB15 430 aa18.7■□□□□ 0.58
CLN3-206ENST00000360019 ZFATQ9P243 1243 aa18.7■□□□□ 0.58
CLN3-206ENST00000360019 LIMD1Q9UGP4 676 aa18.7■□□□□ 0.58
CLN3-206ENST00000360019 ZNF180Q9UJW8 692 aa18.7■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms