RNA–Protein interactions for RNA: ENST00000321805.11

UBE2D3-201, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene UBE2D3, Length 1,087 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-201ENST00000321805 FAM181AQ8N9Y4 354 aa21.47■■□□□ 1.03
UBE2D3-201ENST00000321805 MGME1Q9BQP7 344 aa21.47■■□□□ 1.03
UBE2D3-201ENST00000321805 UCKL1Q9NWZ5 548 aa21.47■■□□□ 1.03
UBE2D3-201ENST00000321805 FREM2Q5SZK8 3169 aa21.47■■□□□ 1.03
UBE2D3-201ENST00000321805 WDFY3Q8IZQ1 3526 aa21.47■■□□□ 1.03
UBE2D3-201ENST00000321805 TMEM110-MUSTN1A8MSY1 372 aa21.46■■□□□ 1.03
UBE2D3-201ENST00000321805 TRAFD1O14545 582 aaPredicted RBP21.46■■□□□ 1.03
UBE2D3-201ENST00000321805 MUSKO15146 869 aa21.46■■□□□ 1.03
UBE2D3-201ENST00000321805 CAPNS1P04632 268 aa21.46■■□□□ 1.03
UBE2D3-201ENST00000321805 GIMD1P0DJR0 217 aa21.46■■□□□ 1.03
UBE2D3-201ENST00000321805 C6P13671 934 aa21.46■■□□□ 1.03
UBE2D3-201ENST00000321805 ITIH2P19823 946 aa21.46■■□□□ 1.03
UBE2D3-201ENST00000321805 CR2P20023 1033 aa21.46■■□□□ 1.03
UBE2D3-201ENST00000321805 IL4RP24394 825 aa21.46■■□□□ 1.03
UBE2D3-201ENST00000321805 NFKBIAP25963 317 aa21.46■■□□□ 1.03
UBE2D3-201ENST00000321805 SCNN1BP51168 640 aa21.46■■□□□ 1.03
UBE2D3-201ENST00000321805 LRRC14Q15048 493 aa21.46■■□□□ 1.03
UBE2D3-201ENST00000321805 CCDC157Q569K6 752 aa21.46■■□□□ 1.03
UBE2D3-201ENST00000321805 MACC1Q6ZN28 852 aa21.46■■□□□ 1.03
UBE2D3-201ENST00000321805 ZSWIM9Q86XI8 627 aa21.46■■□□□ 1.03
UBE2D3-201ENST00000321805 CACTIN-AS1Q8N1I8 211 aa21.46■■□□□ 1.03
UBE2D3-201ENST00000321805 RNF214Q8ND24 703 aa21.46■■□□□ 1.03
UBE2D3-201ENST00000321805 ZNF548Q8NEK5 533 aaPredicted RBP21.46■■□□□ 1.03
UBE2D3-201ENST00000321805 NUDCD1Q96RS6 583 aa21.46■■□□□ 1.03
UBE2D3-201ENST00000321805 DKK4Q9UBT3 224 aa21.46■■□□□ 1.03
UBE2D3-201ENST00000321805 LIG3P49916 1009 aa21.45■■□□□ 1.02
UBE2D3-201ENST00000321805 DPYSL3Q14195 570 aa21.45■■□□□ 1.02
UBE2D3-201ENST00000321805 PAFAH1B3Q15102 231 aaKnown RBP21.45■■□□□ 1.02
UBE2D3-201ENST00000321805 IRF4Q15306 451 aa21.45■■□□□ 1.02
UBE2D3-201ENST00000321805 PAF1Q8N7H5 531 aa21.45■■□□□ 1.02
UBE2D3-201ENST00000321805 RFFLQ8WZ73 363 aa21.45■■□□□ 1.02
UBE2D3-201ENST00000321805 CCDC42Q96M95 316 aa21.45■■□□□ 1.02
UBE2D3-201ENST00000321805 PACSIN1Q9BY11 444 aa21.45■■□□□ 1.02
UBE2D3-201ENST00000321805 NCKIPSDQ9NZQ3 722 aa21.45■■□□□ 1.02
UBE2D3-201ENST00000321805 FFAR2O15552 330 aa21.44■■□□□ 1.02
UBE2D3-201ENST00000321805 HTRA2O43464 458 aaPredicted RBP21.44■■□□□ 1.02
UBE2D3-201ENST00000321805 CKMT1AP12532 417 aa21.44■■□□□ 1.02
UBE2D3-201ENST00000321805 JUNDP17535 347 aa21.44■■□□□ 1.02
UBE2D3-201ENST00000321805 DAB2P98082 770 aa21.44■■□□□ 1.02
UBE2D3-201ENST00000321805 E2F1Q01094 437 aa21.44■■□□□ 1.02
UBE2D3-201ENST00000321805 EIF2B5Q13144 721 aaKnown RBP21.44■■□□□ 1.02
UBE2D3-201ENST00000321805 ZNF542PQ5EBM4 170 aa21.44■■□□□ 1.02
UBE2D3-201ENST00000321805 TPRG1LQ5T0D9 272 aa21.44■■□□□ 1.02
UBE2D3-201ENST00000321805 MARC1Q5VT66 337 aa21.44■■□□□ 1.02
UBE2D3-201ENST00000321805 ZCCHC8Q6NZY4 707 aaKnown RBP21.44■■□□□ 1.02
UBE2D3-201ENST00000321805 SARM1Q6SZW1 724 aa21.44■■□□□ 1.02
UBE2D3-201ENST00000321805 DPPA4Q7L190 304 aa21.44■■□□□ 1.02
UBE2D3-201ENST00000321805 PROSER1Q86XN7 944 aa21.44■■□□□ 1.02
UBE2D3-201ENST00000321805 RHOT2Q8IXI1 618 aa21.44■■□□□ 1.02
UBE2D3-201ENST00000321805 PDCD7Q8N8D1 485 aaKnown RBP21.44■■□□□ 1.02
UBE2D3-201ENST00000321805 KCTD6Q8NC69 237 aa21.44■■□□□ 1.02
UBE2D3-201ENST00000321805 FATE1Q969F0 183 aa21.44■■□□□ 1.02
UBE2D3-201ENST00000321805 FAF2Q96CS3 445 aa21.44■■□□□ 1.02
UBE2D3-201ENST00000321805 CCDC86Q9H6F5 360 aaKnown RBP21.44■■□□□ 1.02
UBE2D3-201ENST00000321805 MBNL1Q9NR56 388 aaKnown RBP21.44■■□□□ 1.02
UBE2D3-201ENST00000321805 HAUS2Q9NVX0 235 aa21.44■■□□□ 1.02
UBE2D3-201ENST00000321805 SPASTQ9UBP0 616 aa21.44■■□□□ 1.02
UBE2D3-201ENST00000321805 SHROOM3Q8TF72 1996 aa21.44■■□□□ 1.02
UBE2D3-201ENST00000321805 ZNF487B1APH4 448 aa21.43■■□□□ 1.02
UBE2D3-201ENST00000321805 K7ESM1 405 aa21.43■■□□□ 1.02
UBE2D3-201ENST00000321805 TPP1O14773 563 aa21.43■■□□□ 1.02
UBE2D3-201ENST00000321805 AQP9O43315 295 aa21.43■■□□□ 1.02
UBE2D3-201ENST00000321805 LZTS3O60299 673 aaPredicted RBP21.43■■□□□ 1.02
UBE2D3-201ENST00000321805 MTA2O94776 668 aa21.43■■□□□ 1.02
UBE2D3-201ENST00000321805 GP1BAP07359 652 aa21.43■■□□□ 1.02
UBE2D3-201ENST00000321805 CD48P09326 243 aa21.43■■□□□ 1.02
UBE2D3-201ENST00000321805 GARSP41250 739 aaKnown RBP21.43■■□□□ 1.02
UBE2D3-201ENST00000321805 ARHGAP25P42331 645 aa21.43■■□□□ 1.02
UBE2D3-201ENST00000321805 MMP13P45452 471 aa21.43■■□□□ 1.02
UBE2D3-201ENST00000321805 BLKP51451 505 aa21.43■■□□□ 1.02
UBE2D3-201ENST00000321805 DUSP3P51452 185 aaPredicted RBP21.43■■□□□ 1.02
UBE2D3-201ENST00000321805 GALNT2Q10471 571 aa21.43■■□□□ 1.02
UBE2D3-201ENST00000321805 RALGDSQ12967 914 aa21.43■■□□□ 1.02
UBE2D3-201ENST00000321805 MMRN1Q13201 1228 aa21.43■■□□□ 1.02
UBE2D3-201ENST00000321805 MTM1Q13496 603 aa21.43■■□□□ 1.02
UBE2D3-201ENST00000321805 CAMK2BQ13554 666 aa21.43■■□□□ 1.02
UBE2D3-201ENST00000321805 WSCD2Q2TBF2 565 aa21.43■■□□□ 1.02
UBE2D3-201ENST00000321805 NCBP2-AS2Q69YL0 99 aa21.43■■□□□ 1.02
UBE2D3-201ENST00000321805 TIGD7Q6NT04 549 aaPredicted RBP21.43■■□□□ 1.02
UBE2D3-201ENST00000321805 VSIG1Q86XK7 387 aa21.43■■□□□ 1.02
UBE2D3-201ENST00000321805 TEX26Q8N6G2 289 aa21.43■■□□□ 1.02
UBE2D3-201ENST00000321805 ATL2Q8NHH9 583 aa21.43■■□□□ 1.02
UBE2D3-201ENST00000321805 NHEJ1Q9H9Q4 299 aaPredicted RBP21.43■■□□□ 1.02
UBE2D3-201ENST00000321805 SCUBE2Q9NQ36 999 aa21.43■■□□□ 1.02
UBE2D3-201ENST00000321805 KCTD5Q9NXV2 234 aa21.43■■□□□ 1.02
UBE2D3-201ENST00000321805 APOBEC3BQ9UH17 382 aaKnown RBP21.43■■□□□ 1.02
UBE2D3-201ENST00000321805 AMACRQ9UHK6 382 aa21.43■■□□□ 1.02
UBE2D3-201ENST00000321805 DMXL2Q8TDJ6 3036 aa21.43■■□□□ 1.02
UBE2D3-201ENST00000321805 MFSD11O43934 449 aa21.42■■□□□ 1.02
UBE2D3-201ENST00000321805 KRT37O76014 449 aa21.42■■□□□ 1.02
UBE2D3-201ENST00000321805 ELFN1P0C7U0 828 aa21.42■■□□□ 1.02
UBE2D3-201ENST00000321805 HTR1BP28222 390 aa21.42■■□□□ 1.02
UBE2D3-201ENST00000321805 ANKRD20A8PQ5CZ79 823 aa21.42■■□□□ 1.02
UBE2D3-201ENST00000321805 HES3Q5TGS1 186 aa21.42■■□□□ 1.02
UBE2D3-201ENST00000321805 PHACTR4Q8IZ21 702 aa21.42■■□□□ 1.02
UBE2D3-201ENST00000321805 PGBD5Q8N414 524 aa21.42■■□□□ 1.02
UBE2D3-201ENST00000321805 PCDH19Q8TAB3 1148 aa21.42■■□□□ 1.02
UBE2D3-201ENST00000321805 APOLD1Q96LR9 279 aa21.42■■□□□ 1.02
UBE2D3-201ENST00000321805 CHP1Q99653 195 aa21.42■■□□□ 1.02
UBE2D3-201ENST00000321805 ANP32EQ9BTT0 268 aa21.42■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 160.8 ms