RNA–Protein interactions for RNA: snR53

snR53, Transcript of C/D box small nucleolar RNA (snoRNA), yeastyeast

Gene snR53, Length 91 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR53snR53 MRPL33P20084 86 aa1.38□□□□□ -2.19
snR53snR53 LST4P34239 828 aa1.38□□□□□ -2.19
snR53snR53 MSS4P38994 779 aa1.38□□□□□ -2.19
snR53snR53 STU2P46675 888 aa1.38□□□□□ -2.19
snR53snR53 YNL108CP53929 270 aa1.38□□□□□ -2.19
snR53snR53 HVG1P0CE11 249 aa1.37□□□□□ -2.19
snR53snR53 PUF4P25339 888 aaKnown RBP RIP-Chip data1.37□□□□□ -2.19not detected
snR53snR53 ALG6Q12001 544 aaKnown RBP1.37□□□□□ -2.19
snR53snR53 NDJ1Q12366 352 aa1.37□□□□□ -2.19
snR53snR53 SUP45P12385 437 aaKnown RBP1.36□□□□□ -2.19
snR53snR53 MSN1P22148 382 aa1.36□□□□□ -2.19
snR53snR53 AIM46P38885 310 aa1.36□□□□□ -2.19
snR53snR53 QRI1P43123 477 aaKnown RBP1.36□□□□□ -2.19
snR53snR53 GCV1P48015 400 aa1.36□□□□□ -2.19
snR53snR53 RIM21P48565 533 aa1.36□□□□□ -2.19
snR53snR53 ACS2P52910 683 aaKnown RBP1.36□□□□□ -2.19
snR53snR53 CAB1Q04430 367 aa1.36□□□□□ -2.19
snR53snR53 GLO4Q12320 285 aa1.36□□□□□ -2.19
snR53snR53 STE11P23561 717 aa1.35□□□□□ -2.19
snR53snR53 BIO2P32451 375 aa1.35□□□□□ -2.19
snR53snR53 AIM26P32858 118 aa1.35□□□□□ -2.19
snR53snR53 SMY2P32909 740 aaKnown RBP1.35□□□□□ -2.19
snR53snR53 GLO1P50107 326 aa1.35□□□□□ -2.19
snR53snR53 FOX2Q02207 900 aaKnown RBP1.35□□□□□ -2.19
snR53snR53 ROT1Q03691 256 aa1.35□□□□□ -2.19
snR53snR53 SAS10Q12136 610 aaPredicted RBP1.35□□□□□ -2.19
snR53snR53 DEF1P35732 738 aaKnown RBP1.34□□□□□ -2.19
snR53snR53 PMA1P05030 918 aaKnown RBP1.33□□□□□ -2.2
snR53snR53 DOM34P33309 386 aa1.33□□□□□ -2.2
snR53snR53 YBR287WP38355 427 aa1.33□□□□□ -2.2
snR53snR53 ELA1P53861 379 aaPredicted RBP1.33□□□□□ -2.2
snR53snR53 KIN1P13185 1064 aa1.32□□□□□ -2.2
snR53snR53 NPL3Q01560 414 aaKnown RBP RIP-Chip data1.32□□□□□ -2.2not detected
snR53snR53 TPP1Q03796 238 aa1.32□□□□□ -2.2
snR53snR53 DUS4Q06063 367 aa1.32□□□□□ -2.2
snR53snR53 PUS7Q08647 676 aaKnown RBP1.32□□□□□ -2.2
snR53snR53 CDC20P26309 610 aa1.31□□□□□ -2.2
snR53snR53 YUR1P26725 428 aa1.31□□□□□ -2.2
snR53snR53 REI1P38344 393 aaPredicted RBP1.31□□□□□ -2.2
snR53snR53 YHL012WP38709 493 aa1.31□□□□□ -2.2
snR53snR53 FIR1P40020 876 aa1.31□□□□□ -2.2
snR53snR53 CWH41P53008 833 aa1.31□□□□□ -2.2
snR53snR53 GAS4Q08271 471 aa1.31□□□□□ -2.2
snR53snR53 CYC1P00044 109 aaPredicted RBP1.3□□□□□ -2.2
snR53snR53 SRS2P12954 1174 aa1.3□□□□□ -2.2
snR53snR53 SAM35P14693 329 aa1.3□□□□□ -2.2
snR53snR53 NNK1P36003 928 aa1.3□□□□□ -2.2
snR53snR53 TMN2Q04562 672 aa1.3□□□□□ -2.2
snR53snR53 HAP4P14064 554 aa1.29□□□□□ -2.2
snR53snR53 PHO87P25360 923 aa1.29□□□□□ -2.2
snR53snR53 NMD3P38861 518 aaKnown RBP1.29□□□□□ -2.2
snR53snR53 YGR045CP53229 120 aa1.29□□□□□ -2.2
snR53snR53 UBP3Q01477 912 aaKnown RBP RIP-Chip data1.29□□□□□ -2.2not detected
snR53snR53 MEC3Q02574 474 aa1.29□□□□□ -2.2
snR53snR53 PLB2Q03674 706 aa1.29□□□□□ -2.2
snR53snR53 ACK1Q07622 623 aaPredicted RBP1.29□□□□□ -2.2
snR53snR53 YIG1Q08956 461 aa1.29□□□□□ -2.2
snR53snR53 SPS1P08458 490 aa1.28□□□□□ -2.2
snR53snR53 MDL2P33311 773 aa1.28□□□□□ -2.2
snR53snR53 KTR7P40504 517 aa1.28□□□□□ -2.2
snR53snR53 RXT3Q07458 294 aa1.28□□□□□ -2.2
snR53snR53 DCG1P32460 244 aa1.27□□□□□ -2.21
snR53snR53 ENV11P53246 860 aa1.27□□□□□ -2.21
snR53snR53 IRC10Q08118 586 aa1.27□□□□□ -2.21
snR53snR53 VAN1P23642 535 aa1.26□□□□□ -2.21
snR53snR53 SUV3P32580 737 aa1.26□□□□□ -2.21
snR53snR53 YBR197CP38306 217 aa1.26□□□□□ -2.21
snR53snR53 STB2P46679 850 aa1.26□□□□□ -2.21
snR53snR53 ROM1P53046 1155 aa1.26□□□□□ -2.21
snR53snR53 AVO1Q08236 1176 aa1.26□□□□□ -2.21
snR53snR53 PYC2P32327 1180 aaKnown RBP1.25□□□□□ -2.21
snR53snR53 HNT2P49775 206 aa1.25□□□□□ -2.21
snR53snR53 MCH5Q08777 521 aa1.25□□□□□ -2.21
snR53snR53 HRR25P29295 494 aaKnown RBP1.24□□□□□ -2.21
snR53snR53 RGD2P43556 714 aa1.24□□□□□ -2.21
snR53snR53 GIS2P53849 153 aaKnown RBP RIP-Chip data1.24□□□□□ -2.21not detected
snR53snR53 MRX10Q05648 414 aa1.24□□□□□ -2.21
snR53snR53 YLR224WQ05947 369 aa1.24□□□□□ -2.21
snR53snR53 AIM39Q08223 395 aa1.24□□□□□ -2.21
snR53snR53 GPB1Q08886 897 aa1.24□□□□□ -2.21
snR53snR53 ENO1P00924 437 aaKnown RBP1.23□□□□□ -2.21
snR53snR53 HTS1P07263 546 aaKnown RBP1.23□□□□□ -2.21
snR53snR53 HXT8P40886 569 aa1.23□□□□□ -2.21
snR53snR53 YAP6Q03935 383 aa1.23□□□□□ -2.21
snR53snR53 TRS33Q99394 268 aa1.23□□□□□ -2.21
snR53snR53 ISC10P32645 267 aa1.22□□□□□ -2.21
snR53snR53 SLX1P38324 304 aa1.22□□□□□ -2.21
snR53snR53 STB4P50104 949 aa1.22□□□□□ -2.21
snR53snR53 IMO32P53219 342 aa1.22□□□□□ -2.21
snR53snR53 UTP22P53254 1237 aaPredicted RBP1.22□□□□□ -2.21
snR53snR53 COQ11Q05892 277 aa1.22□□□□□ -2.21
snR53snR53 PKC1P24583 1151 aa1.21□□□□□ -2.22
snR53snR53 SRO9P25567 434 aaKnown RBP1.21□□□□□ -2.22
snR53snR53 PEP12P32854 288 aa1.21□□□□□ -2.22
snR53snR53 GUA1P38625 525 aaKnown RBP1.21□□□□□ -2.22
snR53snR53 BRL1P38770 471 aa1.21□□□□□ -2.22
snR53snR53 RSC58Q07979 502 aa1.21□□□□□ -2.22
snR53snR53 NBA1Q08229 501 aaKnown RBP1.21□□□□□ -2.22
snR53snR53 YNL162W-AQ3E7A8 72 aa1.21□□□□□ -2.22
snR53snR53 BNR1P40450 1375 aa1.21□□□□□ -2.22
Retrieved 100 of 5,963 RNA–protein pairs in 23 ms