RNA–Protein interactions for RNA: ENST00000642118.1

CASC19-281, Transcript of cancer susceptibility 19, humanhuman

BASIC

Gene CASC19, Length 1,554 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC19-281ENST00000642118 TIMP2P16035 220 aa9.46□□□□□ -0.89
CASC19-281ENST00000642118 C4orf48Q5BLP8 95 aa9.46□□□□□ -0.89
CASC19-281ENST00000642118 WDR4P57081 412 aaKnown RBP9.46□□□□□ -0.9
CASC19-281ENST00000642118 NR5A1Q13285 461 aa9.46□□□□□ -0.9
CASC19-281ENST00000642118 ARID5BQ14865 1188 aa9.46□□□□□ -0.9
CASC19-281ENST00000642118 TOPBP1Q92547 1522 aa9.46□□□□□ -0.9
CASC19-281ENST00000642118 PRDM2Q13029 1718 aa9.45□□□□□ -0.9
CASC19-281ENST00000642118 ZFP42Q96MM3 310 aa9.45□□□□□ -0.9
CASC19-281ENST00000642118 GRM5P41594 1212 aa9.44□□□□□ -0.9
CASC19-281ENST00000642118 SKIV2LQ15477 1246 aaKnown RBP9.44□□□□□ -0.9
CASC19-281ENST00000642118 NBPF14Q5TI25 921 aa9.44□□□□□ -0.9
CASC19-281ENST00000642118 SH3RF1Q7Z6J0 888 aa9.44□□□□□ -0.9
CASC19-281ENST00000642118 NXF1Q9UBU9 619 aaKnown RBP9.44□□□□□ -0.9
CASC19-281ENST00000642118 MRPL14Q6P1L8 145 aaKnown RBP9.43□□□□□ -0.9
CASC19-281ENST00000642118 SLC16A10Q8TF71 515 aa9.43□□□□□ -0.9
CASC19-281ENST00000642118 C1QTNF2Q9BXJ5 285 aa9.43□□□□□ -0.9
CASC19-281ENST00000642118 ABCC8Q09428 1581 aa9.43□□□□□ -0.9
CASC19-281ENST00000642118 CTDSPL2Q05D32 466 aa9.42□□□□□ -0.9
CASC19-281ENST00000642118 SCARF1Q14162 830 aa9.42□□□□□ -0.9
CASC19-281ENST00000642118 NPAS3Q8IXF0 933 aa9.42□□□□□ -0.9
CASC19-281ENST00000642118 GPKOWQ92917 476 aaPredicted RBP eCLIP9.42□□□□□ -0.9
CASC19-281ENST00000642118 LCE2CQ5TA81 110 aa9.41□□□□□ -0.9
CASC19-281ENST00000642118 SH3BP5LQ7L8J4 393 aa9.41□□□□□ -0.9
CASC19-281ENST00000642118 RIMBP3CA6NJZ7 1639 aa9.41□□□□□ -0.9
CASC19-281ENST00000642118 RIMBP3BA6NNM3 1639 aa9.41□□□□□ -0.9
CASC19-281ENST00000642118 RIMBP3Q9UFD9 1639 aa9.41□□□□□ -0.9
CASC19-281ENST00000642118 INSM1Q01101 510 aaPredicted RBP9.41□□□□□ -0.9
CASC19-281ENST00000642118 SH3D19Q5HYK7 790 aa9.41□□□□□ -0.9
CASC19-281ENST00000642118 DDRGK1Q96HY6 314 aa9.41□□□□□ -0.9
CASC19-281ENST00000642118 KDM4CQ9H3R0 1056 aa9.41□□□□□ -0.9
CASC19-281ENST00000642118 TRMT44Q8IYL2 757 aaKnown RBP9.4□□□□□ -0.9
CASC19-281ENST00000642118 MAP4K5Q9Y4K4 846 aa9.4□□□□□ -0.9
CASC19-281ENST00000642118 AQRO60306 1485 aaKnown RBP eCLIP9.4□□□□□ -0.91
CASC19-281ENST00000642118 DNMBPQ6XZF7 1577 aa9.4□□□□□ -0.91
CASC19-281ENST00000642118 ZIC2O95409 532 aaPredicted RBP9.39□□□□□ -0.91
CASC19-281ENST00000642118 NR3C2P08235 984 aa9.39□□□□□ -0.91
CASC19-281ENST00000642118 UBTFP17480 764 aaKnown RBP9.39□□□□□ -0.91
CASC19-281ENST00000642118 NEUROD2Q15784 382 aa9.39□□□□□ -0.91
CASC19-281ENST00000642118 CYB5RLQ6IPT4 315 aa9.39□□□□□ -0.91
CASC19-281ENST00000642118 ITPKCQ96DU7 683 aa9.39□□□□□ -0.91
CASC19-281ENST00000642118 EIF4G3O43432 1585 aaKnown RBP9.38□□□□□ -0.91
CASC19-281ENST00000642118 PPP2R2DQ66LE6 453 aa9.38□□□□□ -0.91
CASC19-281ENST00000642118 PURBQ96QR8 312 aaKnown RBP9.38□□□□□ -0.91
CASC19-281ENST00000642118 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.38□□□□□ -0.91
CASC19-281ENST00000642118 FAM117AQ9C073 453 aa9.38□□□□□ -0.91
CASC19-281ENST00000642118 GPBP1L1Q9HC44 474 aaPredicted RBP9.38□□□□□ -0.91
CASC19-281ENST00000642118 ARHGEF11O15085 1522 aa9.38□□□□□ -0.91
CASC19-281ENST00000642118 PDXDC2PQ6P474 469 aa9.37□□□□□ -0.91
CASC19-281ENST00000642118 PROCA1Q8NCQ7 364 aaPredicted RBP9.37□□□□□ -0.91
CASC19-281ENST00000642118 ZFAND3Q9H8U3 227 aa9.37□□□□□ -0.91
CASC19-281ENST00000642118 MAGEB6P1A0A0J9YX57 407 aa9.36□□□□□ -0.91
CASC19-281ENST00000642118 VASH1Q7L8A9 365 aaPredicted RBP9.36□□□□□ -0.91
CASC19-281ENST00000642118 STK17AQ9UEE5 414 aa9.36□□□□□ -0.91
CASC19-281ENST00000642118 FBXO31Q5XUX0 539 aaPredicted RBP9.35□□□□□ -0.91
CASC19-281ENST00000642118 LRRN4Q8WUT4 740 aa9.35□□□□□ -0.91
CASC19-281ENST00000642118 IRF7Q92985 503 aa9.35□□□□□ -0.91
CASC19-281ENST00000642118 POLA1P09884 1462 aaPredicted RBP9.35□□□□□ -0.91
CASC19-281ENST00000642118 SOGA1O94964 1423 aa9.34□□□□□ -0.91
CASC19-281ENST00000642118 TARBP1Q13395 1621 aaKnown RBP9.34□□□□□ -0.91
CASC19-281ENST00000642118 H3BM21 787 aa9.34□□□□□ -0.91
CASC19-281ENST00000642118 FKBPLQ9UIM3 349 aa9.34□□□□□ -0.91
CASC19-281ENST00000642118 RAD54L2Q9Y4B4 1467 aa9.34□□□□□ -0.91
CASC19-281ENST00000642118 TDRD9Q8NDG6 1382 aaKnown RBP9.34□□□□□ -0.91
CASC19-281ENST00000642118 TRIM26Q12899 539 aaPredicted RBP9.33□□□□□ -0.92
CASC19-281ENST00000642118 ERFEQ4G0M1 354 aa9.33□□□□□ -0.92
CASC19-281ENST00000642118 ATP1B4Q9UN42 357 aaPredicted RBP9.33□□□□□ -0.92
CASC19-281ENST00000642118 EMILIN1Q9Y6C2 1016 aa9.33□□□□□ -0.92
CASC19-281ENST00000642118 ZC3H4Q9UPT8 1303 aaKnown RBP9.33□□□□□ -0.92
CASC19-281ENST00000642118 UPP2O95045 317 aa9.33□□□□□ -0.92
CASC19-281ENST00000642118 FSHRP23945 695 aa9.33□□□□□ -0.92
CASC19-281ENST00000642118 CARD14Q9BXL6 1004 aa9.33□□□□□ -0.92
CASC19-281ENST00000642118 NR6A1Q15406 480 aa9.32□□□□□ -0.92
CASC19-281ENST00000642118 CCDC116Q8IYX3 515 aa9.32□□□□□ -0.92
CASC19-281ENST00000642118 MEIOBQ8N635 442 aa9.32□□□□□ -0.92
CASC19-281ENST00000642118 ARHGAP9Q9BRR9 750 aa9.32□□□□□ -0.92
CASC19-281ENST00000642118 CHD1O14646 1710 aa9.32□□□□□ -0.92
CASC19-281ENST00000642118 VEGFBP49765 207 aa9.31□□□□□ -0.92
CASC19-281ENST00000642118 C6orf118Q5T5N4 469 aa9.31□□□□□ -0.92
CASC19-281ENST00000642118 CHMP7Q8WUX9 453 aaPredicted RBP9.31□□□□□ -0.92
CASC19-281ENST00000642118 CDV3Q9UKY7 258 aaKnown RBP9.31□□□□□ -0.92
CASC19-281ENST00000642118 GMPRP36959 345 aa9.3□□□□□ -0.92
CASC19-281ENST00000642118 LINC00528Q8N1L1 170 aa9.3□□□□□ -0.92
CASC19-281ENST00000642118 SOBPA7XYQ1 873 aa9.29□□□□□ -0.92
CASC19-281ENST00000642118 AP1G2O75843 785 aa9.29□□□□□ -0.92
CASC19-281ENST00000642118 BMP2P12643 396 aa9.29□□□□□ -0.92
CASC19-281ENST00000642118 ZBTB33Q86T24 672 aa9.29□□□□□ -0.92
CASC19-281ENST00000642118 TSEN34Q9BSV6 310 aaKnown RBP9.29□□□□□ -0.92
CASC19-281ENST00000642118 GPSM3Q9Y4H4 160 aa9.29□□□□□ -0.92
CASC19-281ENST00000642118 FGD5Q6ZNL6 1462 aa9.29□□□□□ -0.92
CASC19-281ENST00000642118 SNAPC4Q5SXM2 1469 aa9.29□□□□□ -0.92
CASC19-281ENST00000642118 ARAP1Q96P48 1450 aa9.29□□□□□ -0.92
CASC19-281ENST00000642118 MAN1A2O60476 641 aa9.29□□□□□ -0.92
CASC19-281ENST00000642118 PTK2Q05397 1052 aa9.29□□□□□ -0.92
CASC19-281ENST00000642118 NPM2Q86SE8 214 aaKnown RBP9.29□□□□□ -0.92
CASC19-281ENST00000642118 PGPEP1Q9NXJ5 209 aa9.28□□□□□ -0.92
CASC19-281ENST00000642118 SOS2Q07890 1332 aaPredicted RBP9.27□□□□□ -0.93
CASC19-281ENST00000642118 ERBB4Q15303 1308 aa9.27□□□□□ -0.93
CASC19-281ENST00000642118 PPP1R26Q5T8A7 1209 aaPredicted RBP9.27□□□□□ -0.93
CASC19-281ENST00000642118 KCTD15Q96SI1 283 aaPredicted RBP9.27□□□□□ -0.93
CASC19-281ENST00000642118 PNMA1Q8ND90 353 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 98.7 ms