RNA–Protein interactions for RNA: ENST00000641213.1

PHGDH-211, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,053 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-211ENST00000641213 AMOTL2Q9Y2J4 779 aa21.86■■□□□ 1.09
PHGDH-211ENST00000641213 USP6P35125 1406 aa21.86■■□□□ 1.09
PHGDH-211ENST00000641213 TRIM27P14373 513 aa21.86■■□□□ 1.09
PHGDH-211ENST00000641213 OVOS2A0A0J9YW53 1432 aa21.85■■□□□ 1.09
PHGDH-211ENST00000641213 PTCH1Q13635 1447 aa21.85■■□□□ 1.09
PHGDH-211ENST00000641213 OVOS2Q6IE36 1432 aa21.85■■□□□ 1.09
PHGDH-211ENST00000641213 DNAJC5Q9H3Z4 198 aa21.84■■□□□ 1.09
PHGDH-211ENST00000641213 ATF7IPQ6VMQ6 1270 aa21.84■■□□□ 1.09
PHGDH-211ENST00000641213 THEMISQ8N1K5 641 aaPredicted RBP21.84■■□□□ 1.09
PHGDH-211ENST00000641213 XRN1Q8IZH2 1706 aaKnown RBP21.83■■□□□ 1.09
PHGDH-211ENST00000641213 PEAK1Q9H792 1746 aa21.83■■□□□ 1.09
PHGDH-211ENST00000641213 NOB1Q9ULX3 412 aaKnown RBP21.83■■□□□ 1.09
PHGDH-211ENST00000641213 RIMS1Q86UR5 1692 aaKnown RBP21.82■■□□□ 1.08
PHGDH-211ENST00000641213 CALD1Q05682 793 aaKnown RBP21.82■■□□□ 1.08
PHGDH-211ENST00000641213 ALDH1L2Q3SY69 923 aa21.82■■□□□ 1.08
PHGDH-211ENST00000641213 LAS1LQ9Y4W2 734 aaKnown RBP21.82■■□□□ 1.08
PHGDH-211ENST00000641213 THUMPD2Q9BTF0 503 aaKnown RBP21.81■■□□□ 1.08
PHGDH-211ENST00000641213 RWDD1Q9H446 243 aaPredicted RBP21.81■■□□□ 1.08
PHGDH-211ENST00000641213 SSH2Q76I76 1423 aa21.81■■□□□ 1.08
PHGDH-211ENST00000641213 KIF16BQ96L93 1317 aa21.81■■□□□ 1.08
PHGDH-211ENST00000641213 FMN2Q9NZ56 1722 aa21.8■■□□□ 1.08
PHGDH-211ENST00000641213 RGPD1P0DJD0 1748 aa21.79■■□□□ 1.08
PHGDH-211ENST00000641213 GNAI1P63096 354 aa21.79■■□□□ 1.08
PHGDH-211ENST00000641213 ZNF428Q96B54 188 aa21.79■■□□□ 1.08
PHGDH-211ENST00000641213 IFT57Q9NWB7 429 aa21.79■■□□□ 1.08
PHGDH-211ENST00000641213 DDX19BQ9UMR2 479 aa21.79■■□□□ 1.08
PHGDH-211ENST00000641213 ZNF853P0CG23 659 aa21.78■■□□□ 1.08
PHGDH-211ENST00000641213 DDRGK1Q96HY6 314 aa21.78■■□□□ 1.08
PHGDH-211ENST00000641213 USP31Q70CQ4 1352 aa21.78■■□□□ 1.08
PHGDH-211ENST00000641213 IPO8O15397 1037 aaKnown RBP21.78■■□□□ 1.08
PHGDH-211ENST00000641213 EIF4A2Q14240 407 aaKnown RBP21.78■■□□□ 1.08
PHGDH-211ENST00000641213 ITPRIPQ8IWB1 547 aa21.78■■□□□ 1.08
PHGDH-211ENST00000641213 LMOD3Q0VAK6 560 aa21.77■■□□□ 1.08
PHGDH-211ENST00000641213 BRPF1P55201 1214 aaPredicted RBP21.76■■□□□ 1.07
PHGDH-211ENST00000641213 PDZRN3Q9UPQ7 1066 aa21.76■■□□□ 1.07
PHGDH-211ENST00000641213 CEP170BQ9Y4F5 1589 aaPredicted RBP21.76■■□□□ 1.07
PHGDH-211ENST00000641213 TMEM57Q8N5G2 664 aa21.76■■□□□ 1.07
PHGDH-211ENST00000641213 VAMP4O75379 141 aa21.75■■□□□ 1.07
PHGDH-211ENST00000641213 MBIPQ9NS73 344 aa21.75■■□□□ 1.07
PHGDH-211ENST00000641213 TTC21AQ8NDW8 1320 aa21.75■■□□□ 1.07
PHGDH-211ENST00000641213 TRHP20396 242 aaPredicted RBP21.75■■□□□ 1.07
PHGDH-211ENST00000641213 AEBP1Q8IUX7 1158 aa21.74■■□□□ 1.07
PHGDH-211ENST00000641213 CFAP44Q96MT7 982 aa21.73■■□□□ 1.07
PHGDH-211ENST00000641213 PIK3C2AO00443 1686 aa21.73■■□□□ 1.07
PHGDH-211ENST00000641213 FAM83GA6ND36 823 aa21.73■■□□□ 1.07
PHGDH-211ENST00000641213 SULT6B1Q6IMI4 303 aa21.73■■□□□ 1.07
PHGDH-211ENST00000641213 TSPYL6Q8N831 410 aa21.73■■□□□ 1.07
PHGDH-211ENST00000641213 HDAC1Q13547 482 aaPredicted RBP21.71■■□□□ 1.07
PHGDH-211ENST00000641213 HSP90AB2PQ58FF8 381 aa21.71■■□□□ 1.07
PHGDH-211ENST00000641213 NBR1Q14596 966 aa21.71■■□□□ 1.07
PHGDH-211ENST00000641213 MRPL50Q8N5N7 158 aaKnown RBP21.71■■□□□ 1.07
PHGDH-211ENST00000641213 ZBTB40Q9NUA8 1239 aa21.71■■□□□ 1.07
PHGDH-211ENST00000641213 NGDNQ8NEJ9 315 aaKnown RBP21.7■■□□□ 1.06
PHGDH-211ENST00000641213 CHD2O14647 1828 aaKnown RBP21.7■■□□□ 1.06
PHGDH-211ENST00000641213 PIK3R4Q99570 1358 aa21.69■■□□□ 1.06
PHGDH-211ENST00000641213 MARF1Q9Y4F3 1742 aaKnown RBP21.69■■□□□ 1.06
PHGDH-211ENST00000641213 DCTN1Q14203 1278 aa21.69■■□□□ 1.06
PHGDH-211ENST00000641213 KCNA6P17658 529 aa21.68■■□□□ 1.06
PHGDH-211ENST00000641213 ARHGAP45Q92619 1136 aa21.68■■□□□ 1.06
PHGDH-211ENST00000641213 ANKARQ7Z5J8 1434 aa21.68■■□□□ 1.06
PHGDH-211ENST00000641213 ELL2O00472 640 aaPredicted RBP21.68■■□□□ 1.06
PHGDH-211ENST00000641213 SOX12O15370 315 aa21.68■■□□□ 1.06
PHGDH-211ENST00000641213 TWISTNBQ3B726 338 aaPredicted RBP21.68■■□□□ 1.06
PHGDH-211ENST00000641213 C8orf58Q8NAV2 365 aa21.67■■□□□ 1.06
PHGDH-211ENST00000641213 MAP3K19Q56UN5 1328 aa21.67■■□□□ 1.06
PHGDH-211ENST00000641213 ZNF142P52746 1687 aaPredicted RBP21.66■■□□□ 1.06
PHGDH-211ENST00000641213 USP54Q70EL1 1684 aa21.66■■□□□ 1.06
PHGDH-211ENST00000641213 USP19O94966 1318 aa21.65■■□□□ 1.06
PHGDH-211ENST00000641213 SBNO1A3KN83 1393 aa21.65■■□□□ 1.06
PHGDH-211ENST00000641213 SEC24BO95487 1268 aa21.65■■□□□ 1.06
PHGDH-211ENST00000641213 ARHGEF10O15013 1369 aa21.65■■□□□ 1.06
PHGDH-211ENST00000641213 FLT4P35916 1363 aa21.65■■□□□ 1.06
PHGDH-211ENST00000641213 SMC5Q8IY18 1101 aa21.64■■□□□ 1.05
PHGDH-211ENST00000641213 ZBTB7BO15156 539 aaPredicted RBP21.61■■□□□ 1.05
PHGDH-211ENST00000641213 SLC4A3P48751 1232 aa21.61■■□□□ 1.05
PHGDH-211ENST00000641213 ABCC4O15439 1325 aa21.61■■□□□ 1.05
PHGDH-211ENST00000641213 MCM10Q7L590 875 aa21.6■■□□□ 1.05
PHGDH-211ENST00000641213 CHL1O00533 1208 aa21.6■■□□□ 1.05
PHGDH-211ENST00000641213 SETD1BQ9UPS6 1966 aaKnown RBP21.59■■□□□ 1.05
PHGDH-211ENST00000641213 AMPHP49418 695 aa21.59■■□□□ 1.05
PHGDH-211ENST00000641213 NLRP6P59044 892 aa21.59■■□□□ 1.05
PHGDH-211ENST00000641213 CHMP4BQ9H444 224 aaKnown RBP21.59■■□□□ 1.05
PHGDH-211ENST00000641213 DAXXQ9UER7 740 aaPredicted RBP21.59■■□□□ 1.05
PHGDH-211ENST00000641213 KDRP35968 1356 aa21.58■■□□□ 1.05
PHGDH-211ENST00000641213 ADAMTSL3P82987 1691 aa21.58■■□□□ 1.05
PHGDH-211ENST00000641213 ANKLE2Q86XL3 938 aa21.57■■□□□ 1.04
PHGDH-211ENST00000641213 CRB1P82279 1406 aa21.57■■□□□ 1.04
PHGDH-211ENST00000641213 IGSF1Q8N6C5 1336 aa21.56■■□□□ 1.04
PHGDH-211ENST00000641213 API5Q9BZZ5 524 aaKnown RBP21.56■■□□□ 1.04
PHGDH-211ENST00000641213 KIAA0232Q92628 1395 aa21.56■■□□□ 1.04
PHGDH-211ENST00000641213 EYA1Q99502 592 aa21.56■■□□□ 1.04
PHGDH-211ENST00000641213 LTN1O94822 1766 aa21.55■■□□□ 1.04
PHGDH-211ENST00000641213 MTHFSDQ2M296 383 aaKnown RBP21.55■■□□□ 1.04
PHGDH-211ENST00000641213 NUCB1Q02818 461 aa21.54■■□□□ 1.04
PHGDH-211ENST00000641213 KRT24Q2M2I5 525 aa21.54■■□□□ 1.04
PHGDH-211ENST00000641213 RTL5Q5HYW3 569 aaPredicted RBP21.54■■□□□ 1.04
PHGDH-211ENST00000641213 KIF24Q5T7B8 1368 aa21.54■■□□□ 1.04
PHGDH-211ENST00000641213 FOXO3O43524 673 aa21.54■■□□□ 1.04
PHGDH-211ENST00000641213 NUTM2GQ5VZR2 741 aa21.54■■□□□ 1.04
PHGDH-211ENST00000641213 HAP1P54257 671 aaPredicted RBP21.53■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms