RNA–Protein interactions for RNA: ENST00000640421.1

SPIN3-238, Transcript of spindlin family member 3, humanhuman

TSL 5

Gene SPIN3, Length 1,872 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIN3-238ENST00000640421 HSPA1LP34931 641 aa23.75■■□□□ 1.39
SPIN3-238ENST00000640421 EIF4A2Q14240 407 aaKnown RBP23.75■■□□□ 1.39
SPIN3-238ENST00000640421 IP6K1Q92551 441 aa23.75■■□□□ 1.39
SPIN3-238ENST00000640421 WDR43Q15061 677 aaKnown RBP eCLIP23.74■■□□□ 1.39
SPIN3-238ENST00000640421 AXIN2Q9Y2T1 843 aa23.74■■□□□ 1.39
SPIN3-238ENST00000640421 RGPD5Q99666 1765 aa23.74■■□□□ 1.39
SPIN3-238ENST00000640421 YTHDC1Q96MU7 727 aaKnown RBP23.73■■□□□ 1.39
SPIN3-238ENST00000640421 CHRNA2Q15822 529 aa23.73■■□□□ 1.39
SPIN3-238ENST00000640421 HAP1P54257 671 aaPredicted RBP23.72■■□□□ 1.39
SPIN3-238ENST00000640421 RGPD1P0DJD0 1748 aa23.71■■□□□ 1.39
SPIN3-238ENST00000640421 U2SURPO15042 1029 aaKnown RBP23.7■■□□□ 1.39
SPIN3-238ENST00000640421 JCADQ9P266 1359 aa23.69■■□□□ 1.38
SPIN3-238ENST00000640421 LMO7Q8WWI1 1683 aa23.69■■□□□ 1.38
SPIN3-238ENST00000640421 U2AF1L5P0DN76 240 aaPredicted RBP23.68■■□□□ 1.38
SPIN3-238ENST00000640421 U2AF1Q01081 240 aaKnown RBP eCLIP23.68■■□□□ 1.38
SPIN3-238ENST00000640421 NUDCQ9Y266 331 aa23.68■■□□□ 1.38
SPIN3-238ENST00000640421 BLMP54132 1417 aaPredicted RBP23.68■■□□□ 1.38
SPIN3-238ENST00000640421 ABCC6O95255 1503 aa23.68■■□□□ 1.38
SPIN3-238ENST00000640421 LTV1Q96GA3 475 aaPredicted RBP23.68■■□□□ 1.38
SPIN3-238ENST00000640421 PRDM11Q9NQV5 511 aa23.68■■□□□ 1.38
SPIN3-238ENST00000640421 SENP3-EIF4A1A0A087X0R7 540 aa23.66■■□□□ 1.38
SPIN3-238ENST00000640421 FAM83GA6ND36 823 aa23.66■■□□□ 1.38
SPIN3-238ENST00000640421 RGPD2P0DJD1 1756 aa23.66■■□□□ 1.38
SPIN3-238ENST00000640421 CAMTA1Q9Y6Y1 1673 aa23.65■■□□□ 1.38
SPIN3-238ENST00000640421 CCDC146Q8IYE0 955 aa23.65■■□□□ 1.38
SPIN3-238ENST00000640421 NUTM2BA6NNL0 878 aaPredicted RBP23.64■■□□□ 1.37
SPIN3-238ENST00000640421 NUTM2EB1AL46 878 aaPredicted RBP23.64■■□□□ 1.37
SPIN3-238ENST00000640421 HMOX1P09601 288 aa23.64■■□□□ 1.37
SPIN3-238ENST00000640421 NUTM2AQ8IVF1 878 aaPredicted RBP23.64■■□□□ 1.37
SPIN3-238ENST00000640421 ANKRD24Q8TF21 1146 aa23.64■■□□□ 1.37
SPIN3-238ENST00000640421 ERBB3P21860 1342 aa23.63■■□□□ 1.37
SPIN3-238ENST00000640421 EYA1Q99502 592 aa23.63■■□□□ 1.37
SPIN3-238ENST00000640421 AEBP1Q8IUX7 1158 aa23.62■■□□□ 1.37
SPIN3-238ENST00000640421 IGSF1Q8N6C5 1336 aa23.62■■□□□ 1.37
SPIN3-238ENST00000640421 ADAMTS2O95450 1211 aa23.62■■□□□ 1.37
SPIN3-238ENST00000640421 COL14A1Q05707 1796 aaKnown RBP23.61■■□□□ 1.37
SPIN3-238ENST00000640421 RSPH6AQ9H0K4 717 aa23.61■■□□□ 1.37
SPIN3-238ENST00000640421 HNRNPUQ00839 825 aaKnown RBP eCLIP23.6■■□□□ 1.37
SPIN3-238ENST00000640421 NBPF6Q5VWK0 638 aa23.6■■□□□ 1.37
SPIN3-238ENST00000640421 NBPF4Q96M43 638 aa23.6■■□□□ 1.37
SPIN3-238ENST00000640421 LRP6O75581 1613 aa23.6■■□□□ 1.37
SPIN3-238ENST00000640421 PLEKHF1Q96S99 279 aa23.6■■□□□ 1.37
SPIN3-238ENST00000640421 COL5A2P05997 1499 aaPredicted RBP23.59■■□□□ 1.37
SPIN3-238ENST00000640421 SULT6B1Q6IMI4 303 aa23.59■■□□□ 1.37
SPIN3-238ENST00000640421 USHBP1Q8N6Y0 703 aa23.58■■□□□ 1.37
SPIN3-238ENST00000640421 KDRP35968 1356 aa23.58■■□□□ 1.36
SPIN3-238ENST00000640421 FCHSD2O94868 740 aa23.58■■□□□ 1.36
SPIN3-238ENST00000640421 PLCH1Q4KWH8 1693 aa23.57■■□□□ 1.36
SPIN3-238ENST00000640421 SPATA31A6Q5VVP1 1343 aa23.57■■□□□ 1.36
SPIN3-238ENST00000640421 PRKAR2BP31323 418 aa23.57■■□□□ 1.36
SPIN3-238ENST00000640421 RUNDC1Q96C34 613 aa23.56■■□□□ 1.36
SPIN3-238ENST00000640421 BTG4Q9NY30 223 aa23.56■■□□□ 1.36
SPIN3-238ENST00000640421 NCAPD2Q15021 1401 aa23.55■■□□□ 1.36
SPIN3-238ENST00000640421 FAM208AQ9UK61 1670 aaKnown RBP23.55■■□□□ 1.36
SPIN3-238ENST00000640421 APAF1O14727 1248 aa23.54■■□□□ 1.36
SPIN3-238ENST00000640421 PHACTR3Q96KR7 559 aa23.53■■□□□ 1.36
SPIN3-238ENST00000640421 WDR17Q8IZU2 1322 aa23.52■■□□□ 1.36
SPIN3-238ENST00000640421 CSB-PGBD3P0DP91 1061 aa23.51■■□□□ 1.35
SPIN3-238ENST00000640421 TCP11L2Q8N4U5 519 aa23.51■■□□□ 1.35
SPIN3-238ENST00000640421 FBXO41Q8TF61 875 aa23.51■■□□□ 1.35
SPIN3-238ENST00000640421 STRN4Q9NRL3 753 aa23.51■■□□□ 1.35
SPIN3-238ENST00000640421 NLRP2Q9NX02 1062 aa23.51■■□□□ 1.35
SPIN3-238ENST00000640421 NRAPQ86VF7 1730 aa23.51■■□□□ 1.35
SPIN3-238ENST00000640421 SALL2Q9Y467 1007 aaPredicted RBP23.51■■□□□ 1.35
SPIN3-238ENST00000640421 SLIT2O94813 1529 aa23.5■■□□□ 1.35
SPIN3-238ENST00000640421 LARP1Q6PKG0 1096 aaKnown RBP23.5■■□□□ 1.35
SPIN3-238ENST00000640421 RRP7AQ9Y3A4 280 aaKnown RBP23.49■■□□□ 1.35
SPIN3-238ENST00000640421 C8orf37Q96NL8 207 aa23.48■■□□□ 1.35
SPIN3-238ENST00000640421 PNNQ9H307 717 aaKnown RBP23.48■■□□□ 1.35
SPIN3-238ENST00000640421 MAPK8IP3Q9UPT6 1336 aa23.48■■□□□ 1.35
SPIN3-238ENST00000640421 NWD2Q9ULI1 1742 aa23.48■■□□□ 1.35
SPIN3-238ENST00000640421 EVA1CP58658 441 aa23.47■■□□□ 1.35
SPIN3-238ENST00000640421 TOM1L2Q6ZVM7 507 aa23.47■■□□□ 1.35
SPIN3-238ENST00000640421 ZBED9Q6R2W3 1325 aa23.46■■□□□ 1.35
SPIN3-238ENST00000640421 CRB1P82279 1406 aa23.45■■□□□ 1.34
SPIN3-238ENST00000640421 TMPOP42166 694 aaKnown RBP23.45■■□□□ 1.34
SPIN3-238ENST00000640421 NEUROD2Q15784 382 aa23.45■■□□□ 1.34
SPIN3-238ENST00000640421 BCL9LQ86UU0 1499 aa23.44■■□□□ 1.34
SPIN3-238ENST00000640421 MEGF6O75095 1541 aa23.43■■□□□ 1.34
SPIN3-238ENST00000640421 NGLY1Q96IV0 654 aa23.43■■□□□ 1.34
SPIN3-238ENST00000640421 CARD10Q9BWT7 1032 aa23.43■■□□□ 1.34
SPIN3-238ENST00000640421 DLG5Q8TDM6 1919 aa23.42■■□□□ 1.34
SPIN3-238ENST00000640421 NFE2L2Q16236 605 aa23.41■■□□□ 1.34
SPIN3-238ENST00000640421 MTHFSDQ2M296 383 aaKnown RBP23.41■■□□□ 1.34
SPIN3-238ENST00000640421 FNBP4Q8N3X1 1017 aaPredicted RBP23.41■■□□□ 1.34
SPIN3-238ENST00000640421 ZNF521Q96K83 1311 aa23.41■■□□□ 1.34
SPIN3-238ENST00000640421 NEFMP07197 916 aa23.41■■□□□ 1.34
SPIN3-238ENST00000640421 MEX3CQ5U5Q3 659 aaKnown RBP23.4■■□□□ 1.34
SPIN3-238ENST00000640421 PHF23Q9BUL5 403 aaPredicted RBP23.4■■□□□ 1.34
SPIN3-238ENST00000640421 USP35Q9P2H5 1018 aa23.4■■□□□ 1.34
SPIN3-238ENST00000640421 TRIM35Q9UPQ4 493 aa23.39■■□□□ 1.34
SPIN3-238ENST00000640421 RIPK4P57078 832 aa23.39■■□□□ 1.33
SPIN3-238ENST00000640421 UNC5CLQ8IV45 518 aa23.39■■□□□ 1.33
SPIN3-238ENST00000640421 WWC1Q8IX03 1113 aa23.38■■□□□ 1.33
SPIN3-238ENST00000640421 RAPGEF4Q8WZA2 1011 aa23.37■■□□□ 1.33
SPIN3-238ENST00000640421 TNKS1BP1Q9C0C2 1729 aaKnown RBP23.37■■□□□ 1.33
SPIN3-238ENST00000640421 PARP4Q9UKK3 1724 aaKnown RBP23.36■■□□□ 1.33
SPIN3-238ENST00000640421 OVOS2A0A0G2JMS6 1433 aa23.35■■□□□ 1.33
SPIN3-238ENST00000640421 CCDC27Q2M243 656 aa23.35■■□□□ 1.33
SPIN3-238ENST00000640421 NGEFQ8N5V2 710 aa23.35■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 125.9 ms