RNA–Protein interactions for RNA: ENST00000639916.1

PAX6-259, Transcript of paired box 6, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PAX6, Length 2,622 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX6-259ENST00000639916 NEUROD2Q15784 382 aa11.32□□□□□ -0.6
PAX6-259ENST00000639916 TRMT2AQ8IZ69 625 aaKnown RBP11.32□□□□□ -0.6
PAX6-259ENST00000639916 WASLO00401 505 aaPredicted RBP11.31□□□□□ -0.6
PAX6-259ENST00000639916 WWC1Q8IX03 1113 aa11.31□□□□□ -0.6
PAX6-259ENST00000639916 UBR1Q8IWV7 1749 aa11.31□□□□□ -0.6
PAX6-259ENST00000639916 E9PSI1 815 aa11.31□□□□□ -0.6
PAX6-259ENST00000639916 TCP11L2Q8N4U5 519 aa11.31□□□□□ -0.6
PAX6-259ENST00000639916 GTPBP4Q9BZE4 634 aaKnown RBP11.31□□□□□ -0.6
PAX6-259ENST00000639916 U2AF1L5P0DN76 240 aaPredicted RBP11.3□□□□□ -0.6
PAX6-259ENST00000639916 LTKP29376 864 aa11.3□□□□□ -0.6
PAX6-259ENST00000639916 U2AF1Q01081 240 aaKnown RBP eCLIP11.3□□□□□ -0.6
PAX6-259ENST00000639916 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.3□□□□□ -0.6
PAX6-259ENST00000639916 RRP7AQ9Y3A4 280 aaKnown RBP11.3□□□□□ -0.6
PAX6-259ENST00000639916 DYNC1I1O14576 645 aa11.3□□□□□ -0.6
PAX6-259ENST00000639916 SIRT1Q96EB6 747 aa11.29□□□□□ -0.6
PAX6-259ENST00000639916 LETM1O95202 739 aaPredicted RBP11.29□□□□□ -0.6
PAX6-259ENST00000639916 GAS2L3Q86XJ1 694 aa11.29□□□□□ -0.6
PAX6-259ENST00000639916 NLRP1Q9C000 1473 aa11.29□□□□□ -0.6
PAX6-259ENST00000639916 FAM135BQ49AJ0 1406 aa11.28□□□□□ -0.6
PAX6-259ENST00000639916 MED14O60244 1454 aa11.28□□□□□ -0.6
PAX6-259ENST00000639916 MSNP26038 577 aaKnown RBP11.28□□□□□ -0.6
PAX6-259ENST00000639916 C20orf194Q5TEA3 1177 aa11.28□□□□□ -0.6
PAX6-259ENST00000639916 NUDT16Q96DE0 195 aaKnown RBP11.28□□□□□ -0.6
PAX6-259ENST00000639916 NKTRP30414 1462 aaKnown RBP11.28□□□□□ -0.6
PAX6-259ENST00000639916 VIRMAQ69YN4 1812 aaKnown RBP11.28□□□□□ -0.6
PAX6-259ENST00000639916 U2SURPO15042 1029 aaKnown RBP11.27□□□□□ -0.6
PAX6-259ENST00000639916 EID1Q9Y6B2 187 aa11.27□□□□□ -0.6
PAX6-259ENST00000639916 TECPR2O15040 1411 aa11.27□□□□□ -0.6
PAX6-259ENST00000639916 ATP7BP35670 1465 aa11.27□□□□□ -0.61
PAX6-259ENST00000639916 PPIP5K1Q6PFW1 1433 aa11.27□□□□□ -0.61
PAX6-259ENST00000639916 ADAMTS13Q76LX8 1427 aa11.27□□□□□ -0.61
PAX6-259ENST00000639916 SEC24BO95487 1268 aa11.27□□□□□ -0.61
PAX6-259ENST00000639916 SLC26A8Q96RN1 970 aa11.27□□□□□ -0.61
PAX6-259ENST00000639916 PLEKHG1Q9ULL1 1385 aa11.26□□□□□ -0.61
PAX6-259ENST00000639916 NCKAP5LQ9HCH0 1330 aa11.26□□□□□ -0.61
PAX6-259ENST00000639916 CCDC173Q0VFZ6 552 aa11.26□□□□□ -0.61
PAX6-259ENST00000639916 TEX2Q8IWB9 1127 aa11.26□□□□□ -0.61
PAX6-259ENST00000639916 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.26□□□□□ -0.61
PAX6-259ENST00000639916 PPP1R9BQ96SB3 815 aa11.26□□□□□ -0.61
PAX6-259ENST00000639916 CCDC61Q9Y6R9 512 aa11.26□□□□□ -0.61
PAX6-259ENST00000639916 ROBO2Q9HCK4 1378 aa11.26□□□□□ -0.61
PAX6-259ENST00000639916 ZBTB22O15209 634 aa11.26□□□□□ -0.61
PAX6-259ENST00000639916 FBLN1P23142 703 aa11.25□□□□□ -0.61
PAX6-259ENST00000639916 TBC1D2Q9BYX2 928 aa11.25□□□□□ -0.61
PAX6-259ENST00000639916 ANKRD26Q9UPS8 1709 aa11.25□□□□□ -0.61
PAX6-259ENST00000639916 CHRM1P11229 460 aaPredicted RBP11.25□□□□□ -0.61
PAX6-259ENST00000639916 CACNB1Q02641 598 aaPredicted RBP11.25□□□□□ -0.61
PAX6-259ENST00000639916 IQSEC2Q5JU85 1478 aa11.25□□□□□ -0.61
PAX6-259ENST00000639916 CPSF1Q10570 1443 aaKnown RBP11.25□□□□□ -0.61
PAX6-259ENST00000639916 C3P01024 1663 aa11.25□□□□□ -0.61
PAX6-259ENST00000639916 CPS1P31327 1500 aa11.24□□□□□ -0.61
PAX6-259ENST00000639916 DIAPH1O60610 1272 aaKnown RBP11.24□□□□□ -0.61
PAX6-259ENST00000639916 BCAR3O75815 825 aa11.24□□□□□ -0.61
PAX6-259ENST00000639916 BRD2P25440 801 aaKnown RBP11.24□□□□□ -0.61
PAX6-259ENST00000639916 CCDC27Q2M243 656 aa11.24□□□□□ -0.61
PAX6-259ENST00000639916 WDR63Q8IWG1 891 aa11.24□□□□□ -0.61
PAX6-259ENST00000639916 KNDC1Q76NI1 1749 aa11.24□□□□□ -0.61
PAX6-259ENST00000639916 SECISBP2LQ93073 1101 aaKnown RBP11.24□□□□□ -0.61
PAX6-259ENST00000639916 KIF20BQ96Q89 1820 aa11.24□□□□□ -0.61
PAX6-259ENST00000639916 TAF3Q5VWG9 929 aa11.23□□□□□ -0.61
PAX6-259ENST00000639916 THEMISQ8N1K5 641 aaPredicted RBP11.23□□□□□ -0.61
PAX6-259ENST00000639916 COL3A1P02461 1466 aaPredicted RBP11.23□□□□□ -0.61
PAX6-259ENST00000639916 EDC4Q6P2E9 1401 aaKnown RBP11.23□□□□□ -0.61
PAX6-259ENST00000639916 NME9Q86XW9 330 aa11.23□□□□□ -0.61
PAX6-259ENST00000639916 SPRYD3Q8NCJ5 442 aa11.23□□□□□ -0.61
PAX6-259ENST00000639916 PLEKHF1Q96S99 279 aa11.23□□□□□ -0.61
PAX6-259ENST00000639916 POLKQ9UBT6 870 aa11.23□□□□□ -0.61
PAX6-259ENST00000639916 PNPLA6Q8IY17 1366 aa11.23□□□□□ -0.61
PAX6-259ENST00000639916 FER1L4A9Z1Z3 1794 aa11.23□□□□□ -0.61
PAX6-259ENST00000639916 DDX11L8A8MPP1 907 aa11.22□□□□□ -0.61
PAX6-259ENST00000639916 CDK11BP21127 795 aaKnown RBP11.22□□□□□ -0.61
PAX6-259ENST00000639916 DHX37Q8IY37 1157 aaKnown RBP11.22□□□□□ -0.61
PAX6-259ENST00000639916 PRR36Q9H6K5 1346 aa11.22□□□□□ -0.61
PAX6-259ENST00000639916 ZNF500O60304 480 aaPredicted RBP11.22□□□□□ -0.61
PAX6-259ENST00000639916 CBX1P83916 185 aa11.22□□□□□ -0.61
PAX6-259ENST00000639916 XPCQ01831 940 aaPredicted RBP11.22□□□□□ -0.61
PAX6-259ENST00000639916 ZRANB1Q9UGI0 708 aa11.22□□□□□ -0.61
PAX6-259ENST00000639916 MAPK8IP3Q9UPT6 1336 aa11.22□□□□□ -0.61
PAX6-259ENST00000639916 NUTM2FA1L443 756 aa11.22□□□□□ -0.61
PAX6-259ENST00000639916 ZNF692Q9BU19 519 aaPredicted RBP11.22□□□□□ -0.61
PAX6-259ENST00000639916 AMOTL2Q9Y2J4 779 aa11.22□□□□□ -0.61
PAX6-259ENST00000639916 DNTTIP2Q5QJE6 756 aaKnown RBP11.21□□□□□ -0.61
PAX6-259ENST00000639916 CHMP5Q9NZZ3 219 aa11.21□□□□□ -0.61
PAX6-259ENST00000639916 TBX22Q9Y458 520 aa11.21□□□□□ -0.61
PAX6-259ENST00000639916 SLIT1O75093 1534 aa11.21□□□□□ -0.62
PAX6-259ENST00000639916 TMPOP42166 694 aaKnown RBP11.21□□□□□ -0.62
PAX6-259ENST00000639916 CGNQ9P2M7 1197 aaKnown RBP11.21□□□□□ -0.62
PAX6-259ENST00000639916 PTPRUQ92729 1446 aa11.2□□□□□ -0.62
PAX6-259ENST00000639916 ARHGAP23Q9P227 1491 aa11.2□□□□□ -0.62
PAX6-259ENST00000639916 COG3Q96JB2 828 aa11.2□□□□□ -0.62
PAX6-259ENST00000639916 EMILIN1Q9Y6C2 1016 aa11.2□□□□□ -0.62
PAX6-259ENST00000639916 CDC42BPGQ6DT37 1551 aa11.2□□□□□ -0.62
PAX6-259ENST00000639916 NASPP49321 788 aaPredicted RBP11.2□□□□□ -0.62
PAX6-259ENST00000639916 SASS6Q6UVJ0 657 aa11.19□□□□□ -0.62
PAX6-259ENST00000639916 NOL7Q9UMY1 257 aaKnown RBP11.19□□□□□ -0.62
PAX6-259ENST00000639916 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.19□□□□□ -0.62
PAX6-259ENST00000639916 ADGRB2O60241 1585 aa11.19□□□□□ -0.62
PAX6-259ENST00000639916 FCHSD2O94868 740 aa11.19□□□□□ -0.62
PAX6-259ENST00000639916 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.19□□□□□ -0.62
PAX6-259ENST00000639916 RGS22Q8NE09 1264 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms