RNA–Protein interactions for RNA: ENST00000639794.1

SPIN3-228, Transcript of spindlin family member 3, humanhuman

TSL 5

Gene SPIN3, Length 1,681 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIN3-228ENST00000639794 USP54Q70EL1 1684 aa23.29■■□□□ 1.32
SPIN3-228ENST00000639794 SPATA31A5Q5VU36 1347 aa23.29■■□□□ 1.32
SPIN3-228ENST00000639794 SPATA31A7Q8IWB4 1347 aa23.29■■□□□ 1.32
SPIN3-228ENST00000639794 FYB1O15117 783 aa23.28■■□□□ 1.32
SPIN3-228ENST00000639794 BRWD3Q6RI45 1802 aa23.28■■□□□ 1.32
SPIN3-228ENST00000639794 COL18A1P39060 1754 aa23.28■■□□□ 1.32
SPIN3-228ENST00000639794 EP400Q96L91 3159 aa23.28■■□□□ 1.32
SPIN3-228ENST00000639794 SEPT12Q8IYM1 358 aa23.28■■□□□ 1.32
SPIN3-228ENST00000639794 COL5A2P05997 1499 aaPredicted RBP23.27■■□□□ 1.32
SPIN3-228ENST00000639794 AATKQ6ZMQ8 1374 aa23.27■■□□□ 1.32
SPIN3-228ENST00000639794 KIF7Q2M1P5 1343 aa23.27■■□□□ 1.32
SPIN3-228ENST00000639794 PANK3Q9H999 370 aa23.27■■□□□ 1.32
SPIN3-228ENST00000639794 SPATA31A1Q5TZJ5 1347 aa23.25■■□□□ 1.31
SPIN3-228ENST00000639794 CSB-PGBD3P0DP91 1061 aa23.25■■□□□ 1.31
SPIN3-228ENST00000639794 TOM1L2Q6ZVM7 507 aa23.23■■□□□ 1.31
SPIN3-228ENST00000639794 RRS1Q15050 365 aaKnown RBP23.22■■□□□ 1.31
SPIN3-228ENST00000639794 LTV1Q96GA3 475 aaPredicted RBP23.2■■□□□ 1.3
SPIN3-228ENST00000639794 CGNL1Q0VF96 1302 aa23.2■■□□□ 1.3
SPIN3-228ENST00000639794 FAM182BQ5T319 152 aa23.19■■□□□ 1.3
SPIN3-228ENST00000639794 MAP3K19Q56UN5 1328 aa23.19■■□□□ 1.3
SPIN3-228ENST00000639794 TNNT2P45379 298 aaPredicted RBP23.19■■□□□ 1.3
SPIN3-228ENST00000639794 AMPHP49418 695 aa23.19■■□□□ 1.3
SPIN3-228ENST00000639794 CRB1P82279 1406 aa23.18■■□□□ 1.3
SPIN3-228ENST00000639794 TCP11L2Q8N4U5 519 aa23.18■■□□□ 1.3
SPIN3-228ENST00000639794 WDR17Q8IZU2 1322 aa23.18■■□□□ 1.3
SPIN3-228ENST00000639794 CNGB1Q14028 1251 aaPredicted RBP23.17■■□□□ 1.3
SPIN3-228ENST00000639794 UPF1Q92900 1129 aaKnown RBP eCLIP23.17■■□□□ 1.3
SPIN3-228ENST00000639794 WASHC2AQ641Q2 1341 aa23.17■■□□□ 1.3
SPIN3-228ENST00000639794 ONECUT3O60422 494 aaPredicted RBP23.16■■□□□ 1.3
SPIN3-228ENST00000639794 KRT27Q7Z3Y8 459 aa23.16■■□□□ 1.3
SPIN3-228ENST00000639794 CCDC7Q96M83 1385 aa23.16■■□□□ 1.3
SPIN3-228ENST00000639794 ANKRD24Q8TF21 1146 aa23.16■■□□□ 1.3
SPIN3-228ENST00000639794 NLRP2Q9NX02 1062 aa23.15■■□□□ 1.3
SPIN3-228ENST00000639794 THSD7AQ9UPZ6 1657 aa23.14■■□□□ 1.3
SPIN3-228ENST00000639794 PPM1GO15355 546 aaPredicted RBP23.14■■□□□ 1.29
SPIN3-228ENST00000639794 KNSTRNQ9Y448 316 aa23.13■■□□□ 1.29
SPIN3-228ENST00000639794 HOXC9P31274 260 aa23.13■■□□□ 1.29
SPIN3-228ENST00000639794 IP6K1Q92551 441 aa23.13■■□□□ 1.29
SPIN3-228ENST00000639794 ERBB3P21860 1342 aa23.12■■□□□ 1.29
SPIN3-228ENST00000639794 EMILIN1Q9Y6C2 1016 aa23.12■■□□□ 1.29
SPIN3-228ENST00000639794 MAP2P11137 1827 aaKnown RBP23.12■■□□□ 1.29
SPIN3-228ENST00000639794 BARGINQ6ZT62 677 aa23.11■■□□□ 1.29
SPIN3-228ENST00000639794 ABCC6O95255 1503 aa23.11■■□□□ 1.29
SPIN3-228ENST00000639794 ANKRD26Q9UPS8 1709 aa23.11■■□□□ 1.29
SPIN3-228ENST00000639794 RGPD2P0DJD1 1756 aa23.1■■□□□ 1.29
SPIN3-228ENST00000639794 THRAP3Q9Y2W1 955 aaKnown RBP23.09■■□□□ 1.29
SPIN3-228ENST00000639794 PEAK1Q9H792 1746 aa23.09■■□□□ 1.29
SPIN3-228ENST00000639794 CARD10Q9BWT7 1032 aa23.09■■□□□ 1.29
SPIN3-228ENST00000639794 BLMP54132 1417 aaPredicted RBP23.08■■□□□ 1.29
SPIN3-228ENST00000639794 PDE3BQ13370 1112 aa23.08■■□□□ 1.29
SPIN3-228ENST00000639794 WNK3Q9BYP7 1800 aa23.07■■□□□ 1.28
SPIN3-228ENST00000639794 HSP90AB2PQ58FF8 381 aa23.06■■□□□ 1.28
SPIN3-228ENST00000639794 MORC1Q86VD1 984 aa23.06■■□□□ 1.28
SPIN3-228ENST00000639794 CC2D1BQ5T0F9 858 aaKnown RBP23.05■■□□□ 1.28
SPIN3-228ENST00000639794 PARP4Q9UKK3 1724 aaKnown RBP23.04■■□□□ 1.28
SPIN3-228ENST00000639794 LRRC37A3O60309 1634 aa23.04■■□□□ 1.28
SPIN3-228ENST00000639794 DDB1Q16531 1140 aa23.03■■□□□ 1.28
SPIN3-228ENST00000639794 USHBP1Q8N6Y0 703 aa23.03■■□□□ 1.28
SPIN3-228ENST00000639794 RTL1A6NKG5 1358 aa23.03■■□□□ 1.28
SPIN3-228ENST00000639794 FLT4P35916 1363 aa23.02■■□□□ 1.28
SPIN3-228ENST00000639794 AMER1Q5JTC6 1135 aaPredicted RBP23.01■■□□□ 1.27
SPIN3-228ENST00000639794 POLKQ9UBT6 870 aa23.01■■□□□ 1.27
SPIN3-228ENST00000639794 NSD2O96028 1365 aa23■■□□□ 1.27
SPIN3-228ENST00000639794 FAM208AQ9UK61 1670 aaKnown RBP23■■□□□ 1.27
SPIN3-228ENST00000639794 SMG6Q86US8 1419 aaKnown RBP23■■□□□ 1.27
SPIN3-228ENST00000639794 PER1O15534 1290 aaPredicted RBP23■■□□□ 1.27
SPIN3-228ENST00000639794 KAT6BQ8WYB5 2073 aa22.98■■□□□ 1.27
SPIN3-228ENST00000639794 INSRP06213 1382 aa22.98■■□□□ 1.27
SPIN3-228ENST00000639794 IL2RBP14784 551 aa22.98■■□□□ 1.27
SPIN3-228ENST00000639794 NBPF6Q5VWK0 638 aa22.98■■□□□ 1.27
SPIN3-228ENST00000639794 NBPF4Q96M43 638 aa22.98■■□□□ 1.27
SPIN3-228ENST00000639794 DISP2A7MBM2 1401 aa22.98■■□□□ 1.27
SPIN3-228ENST00000639794 SF3B2Q13435 895 aaKnown RBP22.97■■□□□ 1.27
SPIN3-228ENST00000639794 EXOC5O00471 708 aa22.97■■□□□ 1.27
SPIN3-228ENST00000639794 TRIM37O94972 964 aa22.97■■□□□ 1.27
SPIN3-228ENST00000639794 DEFB132Q7Z7B7 95 aa22.97■■□□□ 1.27
SPIN3-228ENST00000639794 CDCA7Q9BWT1 371 aaPredicted RBP22.96■■□□□ 1.27
SPIN3-228ENST00000639794 ZEB1P37275 1124 aaPredicted RBP22.95■■□□□ 1.26
SPIN3-228ENST00000639794 FAM196AQ6ZSG2 479 aa22.95■■□□□ 1.26
SPIN3-228ENST00000639794 MARCH10Q8NA82 808 aaPredicted RBP22.94■■□□□ 1.26
SPIN3-228ENST00000639794 KIF24Q5T7B8 1368 aa22.93■■□□□ 1.26
SPIN3-228ENST00000639794 CCDC125Q86Z20 511 aa22.91■■□□□ 1.26
SPIN3-228ENST00000639794 DDX54Q8TDD1 881 aaKnown RBP22.91■■□□□ 1.26
SPIN3-228ENST00000639794 TNS2Q63HR2 1409 aa22.91■■□□□ 1.26
SPIN3-228ENST00000639794 RGPD1P0DJD0 1748 aa22.91■■□□□ 1.26
SPIN3-228ENST00000639794 OVOS2A0A0G2JMS6 1433 aa22.9■■□□□ 1.26
SPIN3-228ENST00000639794 MEGF6O75095 1541 aa22.9■■□□□ 1.26
SPIN3-228ENST00000639794 EIF4A2Q14240 407 aaKnown RBP22.9■■□□□ 1.26
SPIN3-228ENST00000639794 TNS1Q9HBL0 1735 aaKnown RBP22.89■■□□□ 1.25
SPIN3-228ENST00000639794 SBF2Q86WG5 1849 aa22.88■■□□□ 1.25
SPIN3-228ENST00000639794 RAPGEF4Q8WZA2 1011 aa22.88■■□□□ 1.25
SPIN3-228ENST00000639794 EN1Q05925 392 aaPredicted RBP22.87■■□□□ 1.25
SPIN3-228ENST00000639794 EYA1Q99502 592 aa22.87■■□□□ 1.25
SPIN3-228ENST00000639794 APBA3O96018 575 aa22.87■■□□□ 1.25
SPIN3-228ENST00000639794 MTHFSP49914 203 aa22.87■■□□□ 1.25
SPIN3-228ENST00000639794 PTF1AQ7RTS3 328 aa22.87■■□□□ 1.25
SPIN3-228ENST00000639794 ACSBG1Q96GR2 724 aa22.87■■□□□ 1.25
SPIN3-228ENST00000639794 BAG6P46379 1132 aa22.86■■□□□ 1.25
SPIN3-228ENST00000639794 DDX10Q13206 875 aaKnown RBP22.86■■□□□ 1.25
SPIN3-228ENST00000639794 TATP17735 454 aaPredicted RBP22.85■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms