RNA–Protein interactions for RNA: ENST00000638536.1

SCN1B-206, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN1B, Length 1,600 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-206ENST00000638536 SPATA31A7Q8IWB4 1347 aa30.17■■■□□ 2.42
SCN1B-206ENST00000638536 COL5A2P05997 1499 aaPredicted RBP30.16■■■□□ 2.42
SCN1B-206ENST00000638536 LARP1Q6PKG0 1096 aaKnown RBP30.16■■■□□ 2.42
SCN1B-206ENST00000638536 COG3Q96JB2 828 aa30.15■■■□□ 2.42
SCN1B-206ENST00000638536 PANK3Q9H999 370 aa30.15■■■□□ 2.42
SCN1B-206ENST00000638536 BRWD3Q6RI45 1802 aa30.15■■■□□ 2.42
SCN1B-206ENST00000638536 EVA1CP58658 441 aa30.14■■■□□ 2.42
SCN1B-206ENST00000638536 FAM98CQ17RN3 349 aaKnown RBP30.12■■■□□ 2.41
SCN1B-206ENST00000638536 SPATA31A1Q5TZJ5 1347 aa30.12■■■□□ 2.41
SCN1B-206ENST00000638536 ONECUT3O60422 494 aaPredicted RBP30.11■■■□□ 2.41
SCN1B-206ENST00000638536 USP35Q9P2H5 1018 aa30.11■■■□□ 2.41
SCN1B-206ENST00000638536 SEPT12Q8IYM1 358 aa30.09■■■□□ 2.41
SCN1B-206ENST00000638536 WASHC2AQ641Q2 1341 aa30.09■■■□□ 2.41
SCN1B-206ENST00000638536 CCDC7Q96M83 1385 aa30.06■■■□□ 2.4
SCN1B-206ENST00000638536 RRS1Q15050 365 aaKnown RBP30.04■■■□□ 2.4
SCN1B-206ENST00000638536 MAP3K19Q56UN5 1328 aa30.04■■■□□ 2.4
SCN1B-206ENST00000638536 CGNL1Q0VF96 1302 aa30.03■■■□□ 2.4
SCN1B-206ENST00000638536 THSD7AQ9UPZ6 1657 aa30.03■■■□□ 2.4
SCN1B-206ENST00000638536 CRB1P82279 1406 aa30.03■■■□□ 2.4
SCN1B-206ENST00000638536 WDR17Q8IZU2 1322 aa30.02■■■□□ 2.4
SCN1B-206ENST00000638536 ABCC6O95255 1503 aa30.02■■■□□ 2.4
SCN1B-206ENST00000638536 A0A0G2JS52 829 aa30.01■■■□□ 2.39
SCN1B-206ENST00000638536 MYT1Q01538 1121 aa30.01■■■□□ 2.39
SCN1B-206ENST00000638536 TOM1L2Q6ZVM7 507 aa30■■■□□ 2.39
SCN1B-206ENST00000638536 TCP11L2Q8N4U5 519 aa30■■■□□ 2.39
SCN1B-206ENST00000638536 ANKRD26Q9UPS8 1709 aa29.99■■■□□ 2.39
SCN1B-206ENST00000638536 IP6K1Q92551 441 aa29.99■■■□□ 2.39
SCN1B-206ENST00000638536 UPF1Q92900 1129 aaKnown RBP eCLIP29.98■■■□□ 2.39
SCN1B-206ENST00000638536 MAP2P11137 1827 aaKnown RBP29.98■■■□□ 2.39
SCN1B-206ENST00000638536 ERBB3P21860 1342 aa29.97■■■□□ 2.39
SCN1B-206ENST00000638536 CSB-PGBD3P0DP91 1061 aa29.97■■■□□ 2.39
SCN1B-206ENST00000638536 PEAK1Q9H792 1746 aa29.97■■■□□ 2.39
SCN1B-206ENST00000638536 HOXC9P31274 260 aa29.96■■■□□ 2.39
SCN1B-206ENST00000638536 BARGINQ6ZT62 677 aa29.96■■■□□ 2.39
SCN1B-206ENST00000638536 ANKRD24Q8TF21 1146 aa29.96■■■□□ 2.39
SCN1B-206ENST00000638536 PER1O15534 1290 aaPredicted RBP29.94■■■□□ 2.38
SCN1B-206ENST00000638536 AMPHP49418 695 aa29.94■■■□□ 2.38
SCN1B-206ENST00000638536 KRT27Q7Z3Y8 459 aa29.94■■■□□ 2.38
SCN1B-206ENST00000638536 FAM182BQ5T319 152 aa29.93■■■□□ 2.38
SCN1B-206ENST00000638536 LTV1Q96GA3 475 aaPredicted RBP29.93■■■□□ 2.38
SCN1B-206ENST00000638536 EMILIN1Q9Y6C2 1016 aa29.93■■■□□ 2.38
SCN1B-206ENST00000638536 RGPD2P0DJD1 1756 aa29.93■■■□□ 2.38
SCN1B-206ENST00000638536 BLMP54132 1417 aaPredicted RBP29.93■■■□□ 2.38
SCN1B-206ENST00000638536 CARD10Q9BWT7 1032 aa29.93■■■□□ 2.38
SCN1B-206ENST00000638536 THRAP3Q9Y2W1 955 aaKnown RBP29.93■■■□□ 2.38
SCN1B-206ENST00000638536 KNSTRNQ9Y448 316 aa29.93■■■□□ 2.38
SCN1B-206ENST00000638536 WNK3Q9BYP7 1800 aa29.92■■■□□ 2.38
SCN1B-206ENST00000638536 TNNT2P45379 298 aaPredicted RBP29.92■■■□□ 2.38
SCN1B-206ENST00000638536 AMER1Q5JTC6 1135 aaPredicted RBP29.9■■■□□ 2.38
SCN1B-206ENST00000638536 HSP90AB2PQ58FF8 381 aa29.89■■■□□ 2.37
SCN1B-206ENST00000638536 NLRP2Q9NX02 1062 aa29.89■■■□□ 2.37
SCN1B-206ENST00000638536 PARP4Q9UKK3 1724 aaKnown RBP29.88■■■□□ 2.37
SCN1B-206ENST00000638536 RTL1A6NKG5 1358 aa29.87■■■□□ 2.37
SCN1B-206ENST00000638536 POLKQ9UBT6 870 aa29.86■■■□□ 2.37
SCN1B-206ENST00000638536 NSD2O96028 1365 aa29.85■■■□□ 2.37
SCN1B-206ENST00000638536 DISP2A7MBM2 1401 aa29.84■■■□□ 2.37
SCN1B-206ENST00000638536 LRRC37A3O60309 1634 aa29.84■■■□□ 2.37
SCN1B-206ENST00000638536 PPM1GO15355 546 aaPredicted RBP29.84■■■□□ 2.37
SCN1B-206ENST00000638536 FLT4P35916 1363 aa29.83■■■□□ 2.37
SCN1B-206ENST00000638536 FAM208AQ9UK61 1670 aaKnown RBP29.82■■■□□ 2.36
SCN1B-206ENST00000638536 MORC1Q86VD1 984 aa29.82■■■□□ 2.36
SCN1B-206ENST00000638536 INSRP06213 1382 aa29.82■■■□□ 2.36
SCN1B-206ENST00000638536 KIF24Q5T7B8 1368 aa29.8■■■□□ 2.36
SCN1B-206ENST00000638536 CC2D1BQ5T0F9 858 aaKnown RBP29.8■■■□□ 2.36
SCN1B-206ENST00000638536 CNGB1Q14028 1251 aaPredicted RBP29.79■■■□□ 2.36
SCN1B-206ENST00000638536 NBPF6Q5VWK0 638 aa29.79■■■□□ 2.36
SCN1B-206ENST00000638536 NBPF4Q96M43 638 aa29.79■■■□□ 2.36
SCN1B-206ENST00000638536 ZEB1P37275 1124 aaPredicted RBP29.78■■■□□ 2.36
SCN1B-206ENST00000638536 PDE3BQ13370 1112 aa29.78■■■□□ 2.36
SCN1B-206ENST00000638536 DDB1Q16531 1140 aa29.77■■■□□ 2.36
SCN1B-206ENST00000638536 USHBP1Q8N6Y0 703 aa29.76■■■□□ 2.35
SCN1B-206ENST00000638536 CDCA7Q9BWT1 371 aaPredicted RBP29.74■■■□□ 2.35
SCN1B-206ENST00000638536 IL2RBP14784 551 aa29.73■■■□□ 2.35
SCN1B-206ENST00000638536 MARCH10Q8NA82 808 aaPredicted RBP29.72■■■□□ 2.35
SCN1B-206ENST00000638536 SMG6Q86US8 1419 aaKnown RBP29.71■■■□□ 2.35
SCN1B-206ENST00000638536 EXOC5O00471 708 aa29.7■■■□□ 2.34
SCN1B-206ENST00000638536 NPC1L1Q9UHC9 1359 aa29.69■■■□□ 2.34
SCN1B-206ENST00000638536 FAM196AQ6ZSG2 479 aa29.69■■■□□ 2.34
SCN1B-206ENST00000638536 MEGF6O75095 1541 aa29.68■■■□□ 2.34
SCN1B-206ENST00000638536 TNS2Q63HR2 1409 aa29.67■■■□□ 2.34
SCN1B-206ENST00000638536 EIF4A2Q14240 407 aaKnown RBP29.67■■■□□ 2.34
SCN1B-206ENST00000638536 SBF2Q86WG5 1849 aa29.67■■■□□ 2.34
SCN1B-206ENST00000638536 TRIM37O94972 964 aa29.67■■■□□ 2.34
SCN1B-206ENST00000638536 CCDC125Q86Z20 511 aa29.67■■■□□ 2.34
SCN1B-206ENST00000638536 DEFB132Q7Z7B7 95 aa29.66■■■□□ 2.34
SCN1B-206ENST00000638536 EYA1Q99502 592 aa29.66■■■□□ 2.34
SCN1B-206ENST00000638536 TNS1Q9HBL0 1735 aaKnown RBP29.65■■■□□ 2.34
SCN1B-206ENST00000638536 RGPD1P0DJD0 1748 aa29.64■■■□□ 2.34
SCN1B-206ENST00000638536 KAT6BQ8WYB5 2073 aa29.64■■■□□ 2.34
SCN1B-206ENST00000638536 OVOS2A0A0G2JMS6 1433 aa29.63■■■□□ 2.33
SCN1B-206ENST00000638536 SHANK3Q9BYB0 1731 aa29.63■■■□□ 2.33
SCN1B-206ENST00000638536 MTHFSP49914 203 aa29.63■■■□□ 2.33
SCN1B-206ENST00000638536 NCAPD2Q15021 1401 aa29.61■■■□□ 2.33
SCN1B-206ENST00000638536 PTF1AQ7RTS3 328 aa29.61■■■□□ 2.33
SCN1B-206ENST00000638536 DDX10Q13206 875 aaKnown RBP29.6■■■□□ 2.33
SCN1B-206ENST00000638536 SF3B2Q13435 895 aaKnown RBP29.58■■■□□ 2.33
SCN1B-206ENST00000638536 DDX54Q8TDD1 881 aaKnown RBP29.57■■■□□ 2.32
SCN1B-206ENST00000638536 RAPGEF4Q8WZA2 1011 aa29.56■■■□□ 2.32
SCN1B-206ENST00000638536 ZCRB1Q8TBF4 217 aaKnown RBP29.56■■■□□ 2.32
SCN1B-206ENST00000638536 BCL9O00512 1426 aa29.54■■■□□ 2.32
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms