RNA–Protein interactions for RNA: ENST00000636549.1

CACNA1A-227, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 6,792 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-227ENST00000636549 CCDC82Q8N4S0 544 aa21.15■□□□□ 0.98
CACNA1A-227ENST00000636549 ARGLU1Q9NWB6 273 aaPredicted RBP21.15■□□□□ 0.98
CACNA1A-227ENST00000636549 CCDC88BA6NC98 1476 aa21.15■□□□□ 0.98
CACNA1A-227ENST00000636549 KINO60870 393 aaKnown RBP21.15■□□□□ 0.98
CACNA1A-227ENST00000636549 ACBD3Q9H3P7 528 aa21.15■□□□□ 0.98
CACNA1A-227ENST00000636549 MINDY4BA8MYZ0 360 aa21.15■□□□□ 0.98
CACNA1A-227ENST00000636549 GSE1Q14687 1217 aa21.15■□□□□ 0.98
CACNA1A-227ENST00000636549 RUNDC1Q96C34 613 aa21.15■□□□□ 0.98
CACNA1A-227ENST00000636549 CCDC113Q9H0I3 377 aa21.15■□□□□ 0.98
CACNA1A-227ENST00000636549 UACAQ9BZF9 1416 aa21.14■□□□□ 0.98
CACNA1A-227ENST00000636549 PRPF40AO75400 957 aaKnown RBP21.14■□□□□ 0.98
CACNA1A-227ENST00000636549 DDX24Q9GZR7 859 aaKnown RBP eCLIP21.14■□□□□ 0.98
CACNA1A-227ENST00000636549 POLR3DP05423 398 aaPredicted RBP21.14■□□□□ 0.97
CACNA1A-227ENST00000636549 LRRFIP2Q9Y608 721 aaKnown RBP21.14■□□□□ 0.97
CACNA1A-227ENST00000636549 GBP2P32456 591 aaPredicted RBP21.14■□□□□ 0.97
CACNA1A-227ENST00000636549 GNAI1P63096 354 aa21.13■□□□□ 0.97
CACNA1A-227ENST00000636549 C22orf23Q9BZE7 217 aa21.13■□□□□ 0.97
CACNA1A-227ENST00000636549 ZSCAN21Q9Y5A6 473 aaPredicted RBP21.13■□□□□ 0.97
CACNA1A-227ENST00000636549 TSR2Q969E8 191 aaKnown RBP21.13■□□□□ 0.97
CACNA1A-227ENST00000636549 ZNF354CQ86Y25 554 aa21.13■□□□□ 0.97
CACNA1A-227ENST00000636549 ME1P48163 572 aa21.12■□□□□ 0.97
CACNA1A-227ENST00000636549 NEK4P51957 841 aa21.12■□□□□ 0.97
CACNA1A-227ENST00000636549 SMG6Q86US8 1419 aaKnown RBP21.12■□□□□ 0.97
CACNA1A-227ENST00000636549 TERF1P54274 439 aa21.12■□□□□ 0.97
CACNA1A-227ENST00000636549 MACROD2A1Z1Q3 448 aa21.12■□□□□ 0.97
CACNA1A-227ENST00000636549 VPS8Q8N3P4 1428 aa21.12■□□□□ 0.97
CACNA1A-227ENST00000636549 ZPR1O75312 459 aa21.12■□□□□ 0.97
CACNA1A-227ENST00000636549 PTPRGP23470 1445 aa21.12■□□□□ 0.97
CACNA1A-227ENST00000636549 SLC4A2P04920 1241 aa21.12■□□□□ 0.97
CACNA1A-227ENST00000636549 BCAR3O75815 825 aa21.11■□□□□ 0.97
CACNA1A-227ENST00000636549 CCDC96Q2M329 555 aa21.11■□□□□ 0.97
CACNA1A-227ENST00000636549 CTNNBL1Q8WYA6 563 aaPredicted RBP21.11■□□□□ 0.97
CACNA1A-227ENST00000636549 ERLIN2O94905 339 aa21.11■□□□□ 0.97
CACNA1A-227ENST00000636549 RRS1Q15050 365 aaKnown RBP21.11■□□□□ 0.97
CACNA1A-227ENST00000636549 SLC26A8Q96RN1 970 aa21.11■□□□□ 0.97
CACNA1A-227ENST00000636549 TMOD2Q9NZR1 351 aa21.11■□□□□ 0.97
CACNA1A-227ENST00000636549 USHBP1Q8N6Y0 703 aa21.11■□□□□ 0.97
CACNA1A-227ENST00000636549 ZNHIT6Q9NWK9 470 aaKnown RBP21.11■□□□□ 0.97
CACNA1A-227ENST00000636549 PRDM11Q9NQV5 511 aa21.1■□□□□ 0.97
CACNA1A-227ENST00000636549 MMRN2Q9H8L6 949 aa21.1■□□□□ 0.97
CACNA1A-227ENST00000636549 AACSQ86V21 672 aa21.09■□□□□ 0.97
CACNA1A-227ENST00000636549 ZNF622Q969S3 477 aaKnown RBP eCLIP21.09■□□□□ 0.97
CACNA1A-227ENST00000636549 PRKAR2BP31323 418 aa21.09■□□□□ 0.97
CACNA1A-227ENST00000636549 CCDC112Q8NEF3 446 aa21.09■□□□□ 0.97
CACNA1A-227ENST00000636549 BTBD11A6QL63 1104 aa21.09■□□□□ 0.97
CACNA1A-227ENST00000636549 ANKRD18AQ8IVF6 992 aa21.09■□□□□ 0.97
CACNA1A-227ENST00000636549 DDX11Q96FC9 970 aa21.09■□□□□ 0.97
CACNA1A-227ENST00000636549 PRAM1Q96QH2 718 aa21.09■□□□□ 0.97
CACNA1A-227ENST00000636549 GOPCQ9HD26 462 aa21.09■□□□□ 0.97
CACNA1A-227ENST00000636549 NOB1Q9ULX3 412 aaKnown RBP21.09■□□□□ 0.97
CACNA1A-227ENST00000636549 ZNF530Q6P9A1 599 aaPredicted RBP21.09■□□□□ 0.97
CACNA1A-227ENST00000636549 MPRIPQ6WCQ1 1025 aa21.09■□□□□ 0.97
CACNA1A-227ENST00000636549 SULT6B1Q6IMI4 303 aa21.08■□□□□ 0.97
CACNA1A-227ENST00000636549 CWC27Q6UX04 472 aaKnown RBP21.08■□□□□ 0.97
CACNA1A-227ENST00000636549 PPFIBP1Q86W92 1011 aa21.08■□□□□ 0.97
CACNA1A-227ENST00000636549 NACAP1Q9BZK3 213 aa21.08■□□□□ 0.96
CACNA1A-227ENST00000636549 GOLGA6L10A6NI86 522 aa21.08■□□□□ 0.96
CACNA1A-227ENST00000636549 HDGFL1Q5TGJ6 251 aa21.07■□□□□ 0.96
CACNA1A-227ENST00000636549 SPTY2D1Q68D10 685 aaPredicted RBP21.07■□□□□ 0.96
CACNA1A-227ENST00000636549 USP47Q96K76 1375 aa21.07■□□□□ 0.96
CACNA1A-227ENST00000636549 UBAC1Q9BSL1 405 aa21.07■□□□□ 0.96
CACNA1A-227ENST00000636549 VAT1LQ9HCJ6 419 aa21.07■□□□□ 0.96
CACNA1A-227ENST00000636549 CDC45O75419 566 aa21.06■□□□□ 0.96
CACNA1A-227ENST00000636549 TRIM22Q8IYM9 498 aa21.05■□□□□ 0.96
CACNA1A-227ENST00000636549 PPFIA3O75145 1194 aa21.05■□□□□ 0.96
CACNA1A-227ENST00000636549 PHLDB1Q86UU1 1377 aa21.05■□□□□ 0.96
CACNA1A-227ENST00000636549 C16orf71Q8IYS4 520 aaPredicted RBP21.05■□□□□ 0.96
CACNA1A-227ENST00000636549 IL1RAPL2Q9NP60 686 aa21.05■□□□□ 0.96
CACNA1A-227ENST00000636549 IGHMBP2P38935 993 aaKnown RBP21.05■□□□□ 0.96
CACNA1A-227ENST00000636549 GOLGA6L10A0A0M3HER8 536 aa21.04■□□□□ 0.96
CACNA1A-227ENST00000636549 DESP17661 470 aa21.04■□□□□ 0.96
CACNA1A-227ENST00000636549 PUF60Q9UHX1 559 aaKnown RBP21.04■□□□□ 0.96
CACNA1A-227ENST00000636549 MRPS9P82933 396 aaKnown RBP21.04■□□□□ 0.96
CACNA1A-227ENST00000636549 UBE4AQ14139 1066 aa21.04■□□□□ 0.96
CACNA1A-227ENST00000636549 DHX57Q6P158 1386 aaKnown RBP21.03■□□□□ 0.96
CACNA1A-227ENST00000636549 STIM1Q13586 685 aa21.03■□□□□ 0.96
CACNA1A-227ENST00000636549 CCDC144CPQ8IYA2 1237 aa21.03■□□□□ 0.96
CACNA1A-227ENST00000636549 MKNK2Q9HBH9 465 aa21.03■□□□□ 0.96
CACNA1A-227ENST00000636549 GUCY1B3Q02153 619 aa21.03■□□□□ 0.96
CACNA1A-227ENST00000636549 WDHD1O75717 1129 aaPredicted RBP21.03■□□□□ 0.96
CACNA1A-227ENST00000636549 ZNF396Q96N95 335 aaPredicted RBP21.03■□□□□ 0.96
CACNA1A-227ENST00000636549 MAP3K9P80192 1104 aa21.03■□□□□ 0.96
CACNA1A-227ENST00000636549 PPP4R3AQ6IN85 833 aa21.03■□□□□ 0.96
CACNA1A-227ENST00000636549 SPG7Q9UQ90 795 aa21.03■□□□□ 0.96
CACNA1A-227ENST00000636549 CAMK4Q16566 473 aa21.02■□□□□ 0.96
CACNA1A-227ENST00000636549 NUTM1Q86Y26 1132 aa21.02■□□□□ 0.96
CACNA1A-227ENST00000636549 BCCIPQ9P287 314 aaKnown RBP eCLIP21.02■□□□□ 0.96
CACNA1A-227ENST00000636549 ZNF644Q9H582 1327 aaPredicted RBP21.02■□□□□ 0.96
CACNA1A-227ENST00000636549 NASPP49321 788 aaPredicted RBP21.02■□□□□ 0.96
CACNA1A-227ENST00000636549 EXOSC9Q06265 439 aaKnown RBP21.02■□□□□ 0.96
CACNA1A-227ENST00000636549 KIAA1328Q86T90 577 aa21.02■□□□□ 0.95
CACNA1A-227ENST00000636549 RPGRQ92834 1020 aaKnown RBP21.02■□□□□ 0.95
CACNA1A-227ENST00000636549 ZMYND15Q9H091 742 aa21.02■□□□□ 0.95
CACNA1A-227ENST00000636549 F8W031 263 aaPredicted RBP21.01■□□□□ 0.95
CACNA1A-227ENST00000636549 ZBTB9Q96C00 473 aa21.01■□□□□ 0.95
CACNA1A-227ENST00000636549 METTL24Q5JXM2 366 aa21.01■□□□□ 0.95
CACNA1A-227ENST00000636549 KLHL10Q6JEL2 608 aa21.01■□□□□ 0.95
CACNA1A-227ENST00000636549 NGLY1Q96IV0 654 aa21.01■□□□□ 0.95
CACNA1A-227ENST00000636549 TSPY26PQ9H489 355 aa21.01■□□□□ 0.95
CACNA1A-227ENST00000636549 TRIM21P19474 475 aaKnown RBP21■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms