RNA–Protein interactions for RNA: ENST00000629104.1

CHD2-216, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 5

Gene CHD2, Length 649 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-216ENST00000629104 AATKQ6ZMQ8 1374 aa12.24□□□□□ -0.45
CHD2-216ENST00000629104 ARHGEF25Q86VW2 580 aa12.24□□□□□ -0.45
CHD2-216ENST00000629104 CNKSR2Q8WXI2 1034 aa12.24□□□□□ -0.45
CHD2-216ENST00000629104 COL5A2P05997 1499 aaPredicted RBP12.23□□□□□ -0.45
CHD2-216ENST00000629104 ZBTB7CA1YPR0 619 aa12.23□□□□□ -0.45
CHD2-216ENST00000629104 GJD4Q96KN9 370 aaPredicted RBP12.23□□□□□ -0.45
CHD2-216ENST00000629104 GGNBP2Q9H3C7 697 aa12.23□□□□□ -0.45
CHD2-216ENST00000629104 RGS12O14924 1447 aa12.22□□□□□ -0.45
CHD2-216ENST00000629104 CGNL1Q0VF96 1302 aa12.22□□□□□ -0.45
CHD2-216ENST00000629104 STRN4Q9NRL3 753 aa12.21□□□□□ -0.45
CHD2-216ENST00000629104 CCDC9Q9Y3X0 531 aaKnown RBP12.21□□□□□ -0.45
CHD2-216ENST00000629104 SPATA31A5Q5VU36 1347 aa12.2□□□□□ -0.46
CHD2-216ENST00000629104 SPATA31A7Q8IWB4 1347 aa12.2□□□□□ -0.46
CHD2-216ENST00000629104 EVA1CP58658 441 aa12.2□□□□□ -0.46
CHD2-216ENST00000629104 AXIN2Q9Y2T1 843 aa12.2□□□□□ -0.46
CHD2-216ENST00000629104 MAP2P11137 1827 aaKnown RBP12.19□□□□□ -0.46
CHD2-216ENST00000629104 BRWD3Q6RI45 1802 aa12.19□□□□□ -0.46
CHD2-216ENST00000629104 NSD2O96028 1365 aa12.18□□□□□ -0.46
CHD2-216ENST00000629104 SPATA31A1Q5TZJ5 1347 aa12.18□□□□□ -0.46
CHD2-216ENST00000629104 FBLN1P23142 703 aa12.18□□□□□ -0.46
CHD2-216ENST00000629104 LARP1Q6PKG0 1096 aaKnown RBP12.18□□□□□ -0.46
CHD2-216ENST00000629104 KNSTRNQ9Y448 316 aa12.18□□□□□ -0.46
CHD2-216ENST00000629104 CRB1P82279 1406 aa12.18□□□□□ -0.46
CHD2-216ENST00000629104 WNK3Q9BYP7 1800 aa12.18□□□□□ -0.46
CHD2-216ENST00000629104 PEAK1Q9H792 1746 aa12.17□□□□□ -0.46
CHD2-216ENST00000629104 MAP3K19Q56UN5 1328 aa12.17□□□□□ -0.46
CHD2-216ENST00000629104 FAM208AQ9UK61 1670 aaKnown RBP12.17□□□□□ -0.46
CHD2-216ENST00000629104 THSD7AQ9UPZ6 1657 aa12.17□□□□□ -0.46
CHD2-216ENST00000629104 BLMP54132 1417 aaPredicted RBP12.17□□□□□ -0.46
CHD2-216ENST00000629104 RTL1A6NKG5 1358 aa12.17□□□□□ -0.46
CHD2-216ENST00000629104 WDR17Q8IZU2 1322 aa12.16□□□□□ -0.46
CHD2-216ENST00000629104 PER1O15534 1290 aaPredicted RBP12.16□□□□□ -0.46
CHD2-216ENST00000629104 ONECUT3O60422 494 aaPredicted RBP12.16□□□□□ -0.46
CHD2-216ENST00000629104 RRS1Q15050 365 aaKnown RBP12.16□□□□□ -0.46
CHD2-216ENST00000629104 IP6K1Q92551 441 aa12.16□□□□□ -0.46
CHD2-216ENST00000629104 ERBB3P21860 1342 aa12.15□□□□□ -0.46
CHD2-216ENST00000629104 SOCS7O14512 581 aa12.15□□□□□ -0.46
CHD2-216ENST00000629104 HOXC9P31274 260 aa12.15□□□□□ -0.46
CHD2-216ENST00000629104 AMPHP49418 695 aa12.15□□□□□ -0.46
CHD2-216ENST00000629104 FAM98CQ17RN3 349 aaKnown RBP12.15□□□□□ -0.46
CHD2-216ENST00000629104 AMER1Q5JTC6 1135 aaPredicted RBP12.15□□□□□ -0.46
CHD2-216ENST00000629104 USP35Q9P2H5 1018 aa12.15□□□□□ -0.46
CHD2-216ENST00000629104 KIF24Q5T7B8 1368 aa12.15□□□□□ -0.46
CHD2-216ENST00000629104 RGPD2P0DJD1 1756 aa12.15□□□□□ -0.46
CHD2-216ENST00000629104 CSB-PGBD3P0DP91 1061 aa12.14□□□□□ -0.47
CHD2-216ENST00000629104 TOM1L2Q6ZVM7 507 aa12.14□□□□□ -0.47
CHD2-216ENST00000629104 SEPT12Q8IYM1 358 aa12.14□□□□□ -0.47
CHD2-216ENST00000629104 THRAP3Q9Y2W1 955 aaKnown RBP12.14□□□□□ -0.47
CHD2-216ENST00000629104 PARP4Q9UKK3 1724 aaKnown RBP12.14□□□□□ -0.47
CHD2-216ENST00000629104 BARGINQ6ZT62 677 aa12.13□□□□□ -0.47
CHD2-216ENST00000629104 TCP11L2Q8N4U5 519 aa12.13□□□□□ -0.47
CHD2-216ENST00000629104 ANKRD24Q8TF21 1146 aa12.13□□□□□ -0.47
CHD2-216ENST00000629104 EMILIN1Q9Y6C2 1016 aa12.13□□□□□ -0.47
CHD2-216ENST00000629104 FLT4P35916 1363 aa12.13□□□□□ -0.47
CHD2-216ENST00000629104 A0A0G2JS52 829 aa12.12□□□□□ -0.47
CHD2-216ENST00000629104 TNNT2P45379 298 aaPredicted RBP12.12□□□□□ -0.47
CHD2-216ENST00000629104 MYT1Q01538 1121 aa12.12□□□□□ -0.47
CHD2-216ENST00000629104 MORC1Q86VD1 984 aa12.12□□□□□ -0.47
CHD2-216ENST00000629104 CARD10Q9BWT7 1032 aa12.12□□□□□ -0.47
CHD2-216ENST00000629104 NPC1L1Q9UHC9 1359 aa12.12□□□□□ -0.47
CHD2-216ENST00000629104 INSRP06213 1382 aa12.11□□□□□ -0.47
CHD2-216ENST00000629104 HOXD11P31277 338 aaPredicted RBP12.11□□□□□ -0.47
CHD2-216ENST00000629104 NCBP3Q53F19 620 aaKnown RBP12.11□□□□□ -0.47
CHD2-216ENST00000629104 POLKQ9UBT6 870 aa12.11□□□□□ -0.47
CHD2-216ENST00000629104 LRRC37A3O60309 1634 aa12.11□□□□□ -0.47
CHD2-216ENST00000629104 SMG6Q86US8 1419 aaKnown RBP12.11□□□□□ -0.47
CHD2-216ENST00000629104 HSP90AB2PQ58FF8 381 aa12.1□□□□□ -0.47
CHD2-216ENST00000629104 CC2D1BQ5T0F9 858 aaKnown RBP12.1□□□□□ -0.47
CHD2-216ENST00000629104 LTV1Q96GA3 475 aaPredicted RBP12.1□□□□□ -0.47
CHD2-216ENST00000629104 NLRP2Q9NX02 1062 aa12.1□□□□□ -0.47
CHD2-216ENST00000629104 DISP2A7MBM2 1401 aa12.1□□□□□ -0.47
CHD2-216ENST00000629104 PPM1GO15355 546 aaPredicted RBP12.09□□□□□ -0.47
CHD2-216ENST00000629104 KRT27Q7Z3Y8 459 aa12.09□□□□□ -0.47
CHD2-216ENST00000629104 EP400Q96L91 3159 aa12.08□□□□□ -0.48
CHD2-216ENST00000629104 CDCA7Q9BWT1 371 aaPredicted RBP12.07□□□□□ -0.48
CHD2-216ENST00000629104 RNF216Q9NWF9 866 aaPredicted RBP12.07□□□□□ -0.48
CHD2-216ENST00000629104 CNGB1Q14028 1251 aaPredicted RBP12.06□□□□□ -0.48
CHD2-216ENST00000629104 IL2RBP14784 551 aa12.05□□□□□ -0.48
CHD2-216ENST00000629104 DDX10Q13206 875 aaKnown RBP12.05□□□□□ -0.48
CHD2-216ENST00000629104 PDE3BQ13370 1112 aa12.05□□□□□ -0.48
CHD2-216ENST00000629104 DDB1Q16531 1140 aa12.05□□□□□ -0.48
CHD2-216ENST00000629104 NBPF6Q5VWK0 638 aa12.05□□□□□ -0.48
CHD2-216ENST00000629104 UPF1Q92900 1129 aaKnown RBP eCLIP12.05□□□□□ -0.48
CHD2-216ENST00000629104 NBPF4Q96M43 638 aa12.05□□□□□ -0.48
CHD2-216ENST00000629104 NCAPD2Q15021 1401 aa12.04□□□□□ -0.48
CHD2-216ENST00000629104 TNS2Q63HR2 1409 aa12.04□□□□□ -0.48
CHD2-216ENST00000629104 SHANK3Q9BYB0 1731 aa12.04□□□□□ -0.48
CHD2-216ENST00000629104 RGPD1P0DJD0 1748 aa12.03□□□□□ -0.48
CHD2-216ENST00000629104 MEGF6O75095 1541 aa12.03□□□□□ -0.48
CHD2-216ENST00000629104 SBF2Q86WG5 1849 aa12.03□□□□□ -0.48
CHD2-216ENST00000629104 MTHFSP49914 203 aa12.03□□□□□ -0.48
CHD2-216ENST00000629104 EIF4A2Q14240 407 aaKnown RBP12.03□□□□□ -0.48
CHD2-216ENST00000629104 FAM182BQ5T319 152 aa12.03□□□□□ -0.48
CHD2-216ENST00000629104 USHBP1Q8N6Y0 703 aa12.03□□□□□ -0.48
CHD2-216ENST00000629104 EXOC5O00471 708 aa12.02□□□□□ -0.49
CHD2-216ENST00000629104 TNS1Q9HBL0 1735 aaKnown RBP12.02□□□□□ -0.49
CHD2-216ENST00000629104 OVOS2A0A0G2JMS6 1433 aa12.02□□□□□ -0.49
CHD2-216ENST00000629104 PKD1L3Q7Z443 1732 aa12.01□□□□□ -0.49
CHD2-216ENST00000629104 ZNF316A6NFI3 1004 aaPredicted RBP12.01□□□□□ -0.49
CHD2-216ENST00000629104 EYA1Q99502 592 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms