RNA–Protein interactions for RNA: ENST00000628118.1

CHD2-213, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 1 (best)

Gene CHD2, Length 585 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-213ENST00000628118 WASHC2AQ641Q2 1341 aa11.04□□□□□ -0.64
CHD2-213ENST00000628118 AATKQ6ZMQ8 1374 aa11.03□□□□□ -0.64
CHD2-213ENST00000628118 KIF20BQ96Q89 1820 aa11.03□□□□□ -0.64
CHD2-213ENST00000628118 ZC3H6P61129 1189 aaKnown RBP11.03□□□□□ -0.64
CHD2-213ENST00000628118 ARHGEF25Q86VW2 580 aa11.03□□□□□ -0.64
CHD2-213ENST00000628118 KNSTRNQ9Y448 316 aa11.03□□□□□ -0.64
CHD2-213ENST00000628118 BCL9LQ86UU0 1499 aa11.02□□□□□ -0.65
CHD2-213ENST00000628118 PLEKHG5O94827 1062 aa11.02□□□□□ -0.65
CHD2-213ENST00000628118 NFAT5O94916 1531 aa11.02□□□□□ -0.65
CHD2-213ENST00000628118 PLCH1Q4KWH8 1693 aa11.01□□□□□ -0.65
CHD2-213ENST00000628118 ATRNO75882 1429 aa11.01□□□□□ -0.65
CHD2-213ENST00000628118 RBM6P78332 1123 aaKnown RBP11.01□□□□□ -0.65
CHD2-213ENST00000628118 VPS72Q15906 364 aa11.01□□□□□ -0.65
CHD2-213ENST00000628118 QTRT2Q9H974 415 aaKnown RBP11.01□□□□□ -0.65
CHD2-213ENST00000628118 BTG4Q9NY30 223 aa11.01□□□□□ -0.65
CHD2-213ENST00000628118 KIF24Q5T7B8 1368 aa11.01□□□□□ -0.65
CHD2-213ENST00000628118 NPC1L1Q9UHC9 1359 aa11.01□□□□□ -0.65
CHD2-213ENST00000628118 CDK12Q9NYV4 1490 aaPredicted RBP11□□□□□ -0.65
CHD2-213ENST00000628118 RXRBP28702 533 aa11□□□□□ -0.65
CHD2-213ENST00000628118 POTEAQ6S8J7 498 aa11□□□□□ -0.65
CHD2-213ENST00000628118 GGNBP2Q9H3C7 697 aa11□□□□□ -0.65
CHD2-213ENST00000628118 ZRANB1Q9UGI0 708 aa11□□□□□ -0.65
CHD2-213ENST00000628118 LMO7Q8WWI1 1683 aa11□□□□□ -0.65
CHD2-213ENST00000628118 NRAPQ86VF7 1730 aa10.99□□□□□ -0.65
CHD2-213ENST00000628118 ANKRD26Q9UPS8 1709 aa10.99□□□□□ -0.65
CHD2-213ENST00000628118 PER1O15534 1290 aaPredicted RBP10.99□□□□□ -0.65
CHD2-213ENST00000628118 EVA1CP58658 441 aa10.99□□□□□ -0.65
CHD2-213ENST00000628118 GJD4Q96KN9 370 aaPredicted RBP10.99□□□□□ -0.65
CHD2-213ENST00000628118 RTL1A6NKG5 1358 aa10.99□□□□□ -0.65
CHD2-213ENST00000628118 CHRNA2Q15822 529 aa10.98□□□□□ -0.65
CHD2-213ENST00000628118 BLMP54132 1417 aaPredicted RBP10.98□□□□□ -0.65
CHD2-213ENST00000628118 CAMTA1Q9Y6Y1 1673 aa10.98□□□□□ -0.65
CHD2-213ENST00000628118 COL18A1P39060 1754 aa10.98□□□□□ -0.65
CHD2-213ENST00000628118 SOX12O15370 315 aa10.97□□□□□ -0.65
CHD2-213ENST00000628118 AMER1Q5JTC6 1135 aaPredicted RBP10.97□□□□□ -0.65
CHD2-213ENST00000628118 IP6K1Q92551 441 aa10.97□□□□□ -0.65
CHD2-213ENST00000628118 THRAP3Q9Y2W1 955 aaKnown RBP10.97□□□□□ -0.65
CHD2-213ENST00000628118 COL5A2P05997 1499 aaPredicted RBP10.97□□□□□ -0.65
CHD2-213ENST00000628118 LTN1O94822 1766 aa10.96□□□□□ -0.65
CHD2-213ENST00000628118 SPATA31A5Q5VU36 1347 aa10.96□□□□□ -0.65
CHD2-213ENST00000628118 SPATA31A7Q8IWB4 1347 aa10.96□□□□□ -0.65
CHD2-213ENST00000628118 AMPHP49418 695 aa10.96□□□□□ -0.65
CHD2-213ENST00000628118 CRB1P82279 1406 aa10.95□□□□□ -0.66
CHD2-213ENST00000628118 MAP3K19Q56UN5 1328 aa10.95□□□□□ -0.66
CHD2-213ENST00000628118 WDR17Q8IZU2 1322 aa10.95□□□□□ -0.66
CHD2-213ENST00000628118 ZBTB7CA1YPR0 619 aa10.95□□□□□ -0.66
CHD2-213ENST00000628118 ONECUT3O60422 494 aaPredicted RBP10.95□□□□□ -0.66
CHD2-213ENST00000628118 MORC1Q86VD1 984 aa10.95□□□□□ -0.66
CHD2-213ENST00000628118 STRN4Q9NRL3 753 aa10.95□□□□□ -0.66
CHD2-213ENST00000628118 ZBTB12Q9Y330 459 aaPredicted RBP10.95□□□□□ -0.66
CHD2-213ENST00000628118 CCDC9Q9Y3X0 531 aaKnown RBP10.95□□□□□ -0.66
CHD2-213ENST00000628118 FLT4P35916 1363 aa10.94□□□□□ -0.66
CHD2-213ENST00000628118 ERBB3P21860 1342 aa10.94□□□□□ -0.66
CHD2-213ENST00000628118 SPATA31A1Q5TZJ5 1347 aa10.94□□□□□ -0.66
CHD2-213ENST00000628118 HOXC9P31274 260 aa10.94□□□□□ -0.66
CHD2-213ENST00000628118 BARGINQ6ZT62 677 aa10.94□□□□□ -0.66
CHD2-213ENST00000628118 AXIN2Q9Y2T1 843 aa10.94□□□□□ -0.66
CHD2-213ENST00000628118 CSB-PGBD3P0DP91 1061 aa10.93□□□□□ -0.66
CHD2-213ENST00000628118 TOM1L2Q6ZVM7 507 aa10.93□□□□□ -0.66
CHD2-213ENST00000628118 TCP11L2Q8N4U5 519 aa10.93□□□□□ -0.66
CHD2-213ENST00000628118 CDCA7Q9BWT1 371 aaPredicted RBP10.93□□□□□ -0.66
CHD2-213ENST00000628118 CARD10Q9BWT7 1032 aa10.93□□□□□ -0.66
CHD2-213ENST00000628118 GLI3P10071 1580 aa10.93□□□□□ -0.66
CHD2-213ENST00000628118 MAP2P11137 1827 aaKnown RBP10.93□□□□□ -0.66
CHD2-213ENST00000628118 SMG6Q86US8 1419 aaKnown RBP10.92□□□□□ -0.66
CHD2-213ENST00000628118 INSRP06213 1382 aa10.92□□□□□ -0.66
CHD2-213ENST00000628118 FAM208AQ9UK61 1670 aaKnown RBP10.92□□□□□ -0.66
CHD2-213ENST00000628118 ZNF316A6NFI3 1004 aaPredicted RBP10.92□□□□□ -0.66
CHD2-213ENST00000628118 RRS1Q15050 365 aaKnown RBP10.92□□□□□ -0.66
CHD2-213ENST00000628118 LARP1Q6PKG0 1096 aaKnown RBP10.92□□□□□ -0.66
CHD2-213ENST00000628118 ANKRD24Q8TF21 1146 aa10.92□□□□□ -0.66
CHD2-213ENST00000628118 POLKQ9UBT6 870 aa10.92□□□□□ -0.66
CHD2-213ENST00000628118 RGPD5Q99666 1765 aa10.92□□□□□ -0.66
CHD2-213ENST00000628118 RGS12O14924 1447 aa10.91□□□□□ -0.66
CHD2-213ENST00000628118 CC2D1BQ5T0F9 858 aaKnown RBP10.9□□□□□ -0.66
CHD2-213ENST00000628118 ILDR2Q71H61 639 aa10.9□□□□□ -0.66
CHD2-213ENST00000628118 FBLN1P23142 703 aa10.89□□□□□ -0.67
CHD2-213ENST00000628118 FAM98CQ17RN3 349 aaKnown RBP10.89□□□□□ -0.67
CHD2-213ENST00000628118 SEPT12Q8IYM1 358 aa10.89□□□□□ -0.67
CHD2-213ENST00000628118 EMILIN1Q9Y6C2 1016 aa10.89□□□□□ -0.67
CHD2-213ENST00000628118 TNNT2P45379 298 aaPredicted RBP10.88□□□□□ -0.67
CHD2-213ENST00000628118 DDX10Q13206 875 aaKnown RBP10.88□□□□□ -0.67
CHD2-213ENST00000628118 MKRN4PQ13434 485 aaPredicted RBP10.88□□□□□ -0.67
CHD2-213ENST00000628118 HSP90AB2PQ58FF8 381 aa10.88□□□□□ -0.67
CHD2-213ENST00000628118 PEAK1Q9H792 1746 aa10.88□□□□□ -0.67
CHD2-213ENST00000628118 NLRP2Q9NX02 1062 aa10.88□□□□□ -0.67
CHD2-213ENST00000628118 THSD7AQ9UPZ6 1657 aa10.88□□□□□ -0.67
CHD2-213ENST00000628118 PPM1GO15355 546 aaPredicted RBP10.87□□□□□ -0.67
CHD2-213ENST00000628118 USP35Q9P2H5 1018 aa10.87□□□□□ -0.67
CHD2-213ENST00000628118 PLEKHG2Q9H7P9 1386 aa10.87□□□□□ -0.67
CHD2-213ENST00000628118 A0A0G2JS52 829 aa10.86□□□□□ -0.67
CHD2-213ENST00000628118 IL2RBP14784 551 aa10.86□□□□□ -0.67
CHD2-213ENST00000628118 MYT1Q01538 1121 aa10.86□□□□□ -0.67
CHD2-213ENST00000628118 RALBP1Q15311 655 aa10.86□□□□□ -0.67
CHD2-213ENST00000628118 KRT27Q7Z3Y8 459 aa10.86□□□□□ -0.67
CHD2-213ENST00000628118 LTV1Q96GA3 475 aaPredicted RBP10.86□□□□□ -0.67
CHD2-213ENST00000628118 PARP4Q9UKK3 1724 aaKnown RBP10.86□□□□□ -0.67
CHD2-213ENST00000628118 WNK3Q9BYP7 1800 aa10.86□□□□□ -0.67
CHD2-213ENST00000628118 DISP2A7MBM2 1401 aa10.85□□□□□ -0.67
CHD2-213ENST00000628118 MTHFSP49914 203 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms