RNA–Protein interactions for RNA: ENST00000626828.1

UBE3D-208, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 5 BASIC

Gene UBE3D, Length 114 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-208ENST00000626828 THRAP3Q9Y2W1 955 aaKnown RBP23.13■■□□□ 1.29
UBE3D-208ENST00000626828 USP54Q70EL1 1684 aa23.13■■□□□ 1.29
UBE3D-208ENST00000626828 OVOS2A0A0J9YW53 1432 aa23.12■■□□□ 1.29
UBE3D-208ENST00000626828 OVOS2Q6IE36 1432 aa23.12■■□□□ 1.29
UBE3D-208ENST00000626828 BARGINQ6ZT62 677 aa23.12■■□□□ 1.29
UBE3D-208ENST00000626828 KRT27Q7Z3Y8 459 aa23.12■■□□□ 1.29
UBE3D-208ENST00000626828 COL18A1P39060 1754 aa23.12■■□□□ 1.29
UBE3D-208ENST00000626828 TOM1L2Q6ZVM7 507 aa23.11■■□□□ 1.29
UBE3D-208ENST00000626828 NFAT5O94916 1531 aa23.11■■□□□ 1.29
UBE3D-208ENST00000626828 COL5A2P05997 1499 aaPredicted RBP23.11■■□□□ 1.29
UBE3D-208ENST00000626828 CSB-PGBD3P0DP91 1061 aa23.09■■□□□ 1.29
UBE3D-208ENST00000626828 PANK3Q9H999 370 aa23.09■■□□□ 1.29
UBE3D-208ENST00000626828 WDR17Q8IZU2 1322 aa23.08■■□□□ 1.29
UBE3D-208ENST00000626828 CRB1P82279 1406 aa23.08■■□□□ 1.28
UBE3D-208ENST00000626828 CGNL1Q0VF96 1302 aa23.08■■□□□ 1.28
UBE3D-208ENST00000626828 MYOM1P52179 1685 aa23.07■■□□□ 1.28
UBE3D-208ENST00000626828 CCDC125Q86Z20 511 aa23.07■■□□□ 1.28
UBE3D-208ENST00000626828 IP6K1Q92551 441 aa23.07■■□□□ 1.28
UBE3D-208ENST00000626828 NSD3Q9BZ95 1437 aa23.07■■□□□ 1.28
UBE3D-208ENST00000626828 BRWD3Q6RI45 1802 aa23.06■■□□□ 1.28
UBE3D-208ENST00000626828 CARD10Q9BWT7 1032 aa23.06■■□□□ 1.28
UBE3D-208ENST00000626828 RGPD5Q99666 1765 aa23.05■■□□□ 1.28
UBE3D-208ENST00000626828 FBLN1P23142 703 aa23.05■■□□□ 1.28
UBE3D-208ENST00000626828 AMPHP49418 695 aa23.05■■□□□ 1.28
UBE3D-208ENST00000626828 KIF7Q2M1P5 1343 aa23.04■■□□□ 1.28
UBE3D-208ENST00000626828 ABCC6O95255 1503 aa23.03■■□□□ 1.28
UBE3D-208ENST00000626828 MAP3K19Q56UN5 1328 aa23.03■■□□□ 1.28
UBE3D-208ENST00000626828 PDE3BQ13370 1112 aa23.02■■□□□ 1.28
UBE3D-208ENST00000626828 ANKRD24Q8TF21 1146 aa23.02■■□□□ 1.28
UBE3D-208ENST00000626828 CDCA7Q9BWT1 371 aaPredicted RBP23.02■■□□□ 1.28
UBE3D-208ENST00000626828 LTN1O94822 1766 aa23.01■■□□□ 1.27
UBE3D-208ENST00000626828 HOXC9P31274 260 aa23■■□□□ 1.27
UBE3D-208ENST00000626828 NLRP2Q9NX02 1062 aa23■■□□□ 1.27
UBE3D-208ENST00000626828 ERBB3P21860 1342 aa23■■□□□ 1.27
UBE3D-208ENST00000626828 RRS1Q15050 365 aaKnown RBP22.99■■□□□ 1.27
UBE3D-208ENST00000626828 KNSTRNQ9Y448 316 aa22.99■■□□□ 1.27
UBE3D-208ENST00000626828 BLMP54132 1417 aaPredicted RBP22.99■■□□□ 1.27
UBE3D-208ENST00000626828 KIF20BQ96Q89 1820 aa22.98■■□□□ 1.27
UBE3D-208ENST00000626828 THSD7AQ9UPZ6 1657 aa22.98■■□□□ 1.27
UBE3D-208ENST00000626828 CCDC7Q96M83 1385 aa22.98■■□□□ 1.27
UBE3D-208ENST00000626828 FAM196AQ6ZSG2 479 aa22.97■■□□□ 1.27
UBE3D-208ENST00000626828 SF3B2Q13435 895 aaKnown RBP22.96■■□□□ 1.27
UBE3D-208ENST00000626828 FAM182BQ5T319 152 aa22.96■■□□□ 1.27
UBE3D-208ENST00000626828 LTV1Q96GA3 475 aaPredicted RBP22.96■■□□□ 1.27
UBE3D-208ENST00000626828 DDB1Q16531 1140 aa22.95■■□□□ 1.26
UBE3D-208ENST00000626828 EXOC5O00471 708 aa22.94■■□□□ 1.26
UBE3D-208ENST00000626828 RTL1A6NKG5 1358 aa22.93■■□□□ 1.26
UBE3D-208ENST00000626828 KIF24Q5T7B8 1368 aa22.93■■□□□ 1.26
UBE3D-208ENST00000626828 WASHC2AQ641Q2 1341 aa22.92■■□□□ 1.26
UBE3D-208ENST00000626828 NSD2O96028 1365 aa22.91■■□□□ 1.26
UBE3D-208ENST00000626828 HSP90AB2PQ58FF8 381 aa22.91■■□□□ 1.26
UBE3D-208ENST00000626828 PPM1GO15355 546 aaPredicted RBP22.9■■□□□ 1.26
UBE3D-208ENST00000626828 IL2RBP14784 551 aa22.9■■□□□ 1.26
UBE3D-208ENST00000626828 MORC1Q86VD1 984 aa22.9■■□□□ 1.26
UBE3D-208ENST00000626828 EMILIN1Q9Y6C2 1016 aa22.9■■□□□ 1.26
UBE3D-208ENST00000626828 INSRP06213 1382 aa22.89■■□□□ 1.26
UBE3D-208ENST00000626828 PER1O15534 1290 aaPredicted RBP22.89■■□□□ 1.25
UBE3D-208ENST00000626828 TNNT2P45379 298 aaPredicted RBP22.89■■□□□ 1.25
UBE3D-208ENST00000626828 POLKQ9UBT6 870 aa22.89■■□□□ 1.25
UBE3D-208ENST00000626828 MAP2P11137 1827 aaKnown RBP22.89■■□□□ 1.25
UBE3D-208ENST00000626828 FLT4P35916 1363 aa22.89■■□□□ 1.25
UBE3D-208ENST00000626828 EP400Q96L91 3159 aa22.88■■□□□ 1.25
UBE3D-208ENST00000626828 PARP4Q9UKK3 1724 aaKnown RBP22.88■■□□□ 1.25
UBE3D-208ENST00000626828 AMER1Q5JTC6 1135 aaPredicted RBP22.87■■□□□ 1.25
UBE3D-208ENST00000626828 DISP2A7MBM2 1401 aa22.86■■□□□ 1.25
UBE3D-208ENST00000626828 TRIM37O94972 964 aa22.85■■□□□ 1.25
UBE3D-208ENST00000626828 NBPF6Q5VWK0 638 aa22.85■■□□□ 1.25
UBE3D-208ENST00000626828 MARCH10Q8NA82 808 aaPredicted RBP22.85■■□□□ 1.25
UBE3D-208ENST00000626828 NBPF4Q96M43 638 aa22.85■■□□□ 1.25
UBE3D-208ENST00000626828 SMG6Q86US8 1419 aaKnown RBP22.84■■□□□ 1.25
UBE3D-208ENST00000626828 BAG6P46379 1132 aa22.84■■□□□ 1.25
UBE3D-208ENST00000626828 DEFB132Q7Z7B7 95 aa22.83■■□□□ 1.25
UBE3D-208ENST00000626828 ANKRD26Q9UPS8 1709 aa22.82■■□□□ 1.24
UBE3D-208ENST00000626828 FAM208AQ9UK61 1670 aaKnown RBP22.82■■□□□ 1.24
UBE3D-208ENST00000626828 ZEB1P37275 1124 aaPredicted RBP22.82■■□□□ 1.24
UBE3D-208ENST00000626828 OVOS2A0A0G2JMS6 1433 aa22.8■■□□□ 1.24
UBE3D-208ENST00000626828 WNK3Q9BYP7 1800 aa22.8■■□□□ 1.24
UBE3D-208ENST00000626828 PEAK1Q9H792 1746 aa22.79■■□□□ 1.24
UBE3D-208ENST00000626828 KAT6BQ8WYB5 2073 aa22.79■■□□□ 1.24
UBE3D-208ENST00000626828 APBA3O96018 575 aa22.79■■□□□ 1.24
UBE3D-208ENST00000626828 RAPGEF4Q8WZA2 1011 aa22.78■■□□□ 1.24
UBE3D-208ENST00000626828 LRRC37A3O60309 1634 aa22.78■■□□□ 1.24
UBE3D-208ENST00000626828 RGPD2P0DJD1 1756 aa22.77■■□□□ 1.24
UBE3D-208ENST00000626828 EN1Q05925 392 aaPredicted RBP22.77■■□□□ 1.24
UBE3D-208ENST00000626828 CC2D1BQ5T0F9 858 aaKnown RBP22.77■■□□□ 1.24
UBE3D-208ENST00000626828 USHBP1Q8N6Y0 703 aa22.77■■□□□ 1.24
UBE3D-208ENST00000626828 ZCRB1Q8TBF4 217 aaKnown RBP22.77■■□□□ 1.24
UBE3D-208ENST00000626828 NPC1L1Q9UHC9 1359 aa22.76■■□□□ 1.23
UBE3D-208ENST00000626828 BCL9O00512 1426 aa22.76■■□□□ 1.23
UBE3D-208ENST00000626828 TATP17735 454 aaPredicted RBP22.76■■□□□ 1.23
UBE3D-208ENST00000626828 RGPD1P0DJD0 1748 aa22.76■■□□□ 1.23
UBE3D-208ENST00000626828 TNS2Q63HR2 1409 aa22.75■■□□□ 1.23
UBE3D-208ENST00000626828 DDX54Q8TDD1 881 aaKnown RBP22.75■■□□□ 1.23
UBE3D-208ENST00000626828 EYA1Q99502 592 aa22.75■■□□□ 1.23
UBE3D-208ENST00000626828 BCL11BQ9C0K0 894 aaPredicted RBP22.75■■□□□ 1.23
UBE3D-208ENST00000626828 EIF4A2Q14240 407 aaKnown RBP22.74■■□□□ 1.23
UBE3D-208ENST00000626828 CAMKK2Q96RR4 588 aa22.72■■□□□ 1.23
UBE3D-208ENST00000626828 PLSCR1O15162 318 aa22.7■■□□□ 1.22
UBE3D-208ENST00000626828 MTHFSP49914 203 aa22.7■■□□□ 1.22
UBE3D-208ENST00000626828 CNGB1Q14028 1251 aaPredicted RBP22.7■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms