RNA–Protein interactions for RNA: ENST00000625842.2

VPS8-227, Transcript of VPS8, CORVET complex subunit, humanhuman

APPRIS P4 TSL 5 BASIC

Gene VPS8, Length 4,969 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-227ENST00000625842 ZFYVE27Q5T4F4 411 aa13.29□□□□□ -0.28
VPS8-227ENST00000625842 LRP2BPQ9P2M1 347 aa13.29□□□□□ -0.28
VPS8-227ENST00000625842 ADGRL1O94910 1474 aa13.28□□□□□ -0.28
VPS8-227ENST00000625842 SULT6B1Q6IMI4 303 aa13.28□□□□□ -0.28
VPS8-227ENST00000625842 SRCIN1Q9C0H9 1055 aa13.28□□□□□ -0.28
VPS8-227ENST00000625842 DDB1Q16531 1140 aa13.28□□□□□ -0.28
VPS8-227ENST00000625842 MYCNP04198 464 aaPredicted RBP13.27□□□□□ -0.28
VPS8-227ENST00000625842 CCT4P50991 539 aaKnown RBP13.27□□□□□ -0.28
VPS8-227ENST00000625842 CTNNA3Q9UI47 895 aa13.27□□□□□ -0.28
VPS8-227ENST00000625842 C9orf84Q5VXU9 1444 aa13.27□□□□□ -0.28
VPS8-227ENST00000625842 FEZ1Q99689 392 aa13.27□□□□□ -0.29
VPS8-227ENST00000625842 APAF1O14727 1248 aa13.27□□□□□ -0.29
VPS8-227ENST00000625842 MPRIPQ6WCQ1 1025 aa13.27□□□□□ -0.29
VPS8-227ENST00000625842 NOL8Q76FK4 1167 aaKnown RBP13.27□□□□□ -0.29
VPS8-227ENST00000625842 SURF6O75683 361 aaKnown RBP13.26□□□□□ -0.29
VPS8-227ENST00000625842 DRC1Q96MC2 740 aa13.26□□□□□ -0.29
VPS8-227ENST00000625842 TFCP2L1Q9NZI6 479 aa13.26□□□□□ -0.29
VPS8-227ENST00000625842 GRM1Q13255 1194 aa13.26□□□□□ -0.29
VPS8-227ENST00000625842 SPTY2D1Q68D10 685 aaPredicted RBP13.26□□□□□ -0.29
VPS8-227ENST00000625842 PDCL3Q9H2J4 239 aa13.26□□□□□ -0.29
VPS8-227ENST00000625842 FGD6Q6ZV73 1430 aa13.26□□□□□ -0.29
VPS8-227ENST00000625842 INTS3Q68E01 1043 aaKnown RBP13.25□□□□□ -0.29
VPS8-227ENST00000625842 CNTLNQ9NXG0 1405 aa13.25□□□□□ -0.29
VPS8-227ENST00000625842 NESP48681 1621 aa13.25□□□□□ -0.29
VPS8-227ENST00000625842 DZIP1Q86YF9 867 aaKnown RBP13.25□□□□□ -0.29
VPS8-227ENST00000625842 C19orf44Q9H6X5 657 aa13.25□□□□□ -0.29
VPS8-227ENST00000625842 NEBLO76041 1014 aa13.25□□□□□ -0.29
VPS8-227ENST00000625842 HLA-DOAP06340 250 aa13.25□□□□□ -0.29
VPS8-227ENST00000625842 IFNL2Q8IZJ0 200 aa13.25□□□□□ -0.29
VPS8-227ENST00000625842 CUL5Q93034 780 aa13.25□□□□□ -0.29
VPS8-227ENST00000625842 POLR3DP05423 398 aaPredicted RBP13.25□□□□□ -0.29
VPS8-227ENST00000625842 PRKAR2BP31323 418 aa13.25□□□□□ -0.29
VPS8-227ENST00000625842 HOOK2Q96ED9 719 aa13.25□□□□□ -0.29
VPS8-227ENST00000625842 BIN2Q9UBW5 565 aaPredicted RBP13.25□□□□□ -0.29
VPS8-227ENST00000625842 CHMP5Q9NZZ3 219 aa13.24□□□□□ -0.29
VPS8-227ENST00000625842 PPM1FP49593 454 aaPredicted RBP13.24□□□□□ -0.29
VPS8-227ENST00000625842 LARP1Q6PKG0 1096 aaKnown RBP13.24□□□□□ -0.29
VPS8-227ENST00000625842 ZNF644Q9H582 1327 aaPredicted RBP13.24□□□□□ -0.29
VPS8-227ENST00000625842 USP5P45974 858 aa13.24□□□□□ -0.29
VPS8-227ENST00000625842 RRP12Q5JTH9 1297 aaKnown RBP13.24□□□□□ -0.29
VPS8-227ENST00000625842 EYA3Q99504 573 aa13.24□□□□□ -0.29
VPS8-227ENST00000625842 EFCAB5A4FU69 1503 aa13.24□□□□□ -0.29
VPS8-227ENST00000625842 CEBPAP49715 358 aaPredicted RBP13.24□□□□□ -0.29
VPS8-227ENST00000625842 FMNL2Q96PY5 1086 aa13.24□□□□□ -0.29
VPS8-227ENST00000625842 DNAJC5BQ9UF47 199 aa13.24□□□□□ -0.29
VPS8-227ENST00000625842 CCDC73Q6ZRK6 1079 aa13.23□□□□□ -0.29
VPS8-227ENST00000625842 UBAC1Q9BSL1 405 aa13.23□□□□□ -0.29
VPS8-227ENST00000625842 GNAT3A8MTJ3 354 aa13.23□□□□□ -0.29
VPS8-227ENST00000625842 GNAI2P04899 355 aa13.23□□□□□ -0.29
VPS8-227ENST00000625842 PTCD1O75127 700 aaKnown RBP13.23□□□□□ -0.29
VPS8-227ENST00000625842 RFX1P22670 979 aa13.23□□□□□ -0.29
VPS8-227ENST00000625842 TNNT3P45378 269 aaPredicted RBP13.23□□□□□ -0.29
VPS8-227ENST00000625842 CDR1P51861 262 aa13.23□□□□□ -0.29
VPS8-227ENST00000625842 KIF21BO75037 1637 aa13.23□□□□□ -0.29
VPS8-227ENST00000625842 NOL7Q9UMY1 257 aaKnown RBP13.23□□□□□ -0.29
VPS8-227ENST00000625842 ERBINQ96RT1 1412 aa13.23□□□□□ -0.29
VPS8-227ENST00000625842 NYXQ9GZU5 481 aa13.22□□□□□ -0.29
VPS8-227ENST00000625842 BAG3O95817 575 aa13.22□□□□□ -0.29
VPS8-227ENST00000625842 MYL6BP14649 208 aa13.22□□□□□ -0.29
VPS8-227ENST00000625842 PDE6BP35913 854 aa13.22□□□□□ -0.29
VPS8-227ENST00000625842 TDO2P48775 406 aa13.22□□□□□ -0.29
VPS8-227ENST00000625842 JMYQ8N9B5 988 aa13.22□□□□□ -0.29
VPS8-227ENST00000625842 MYO6Q9UM54 1294 aa13.22□□□□□ -0.29
VPS8-227ENST00000625842 VTI1AQ96AJ9 217 aa13.22□□□□□ -0.29
VPS8-227ENST00000625842 GPR162Q16538 588 aa13.22□□□□□ -0.29
VPS8-227ENST00000625842 NBPF6Q5VWK0 638 aa13.22□□□□□ -0.29
VPS8-227ENST00000625842 NBPF5PQ86XG9 351 aaPredicted RBP13.22□□□□□ -0.29
VPS8-227ENST00000625842 NBPF4Q96M43 638 aa13.22□□□□□ -0.29
VPS8-227ENST00000625842 TRMT112Q9UI30 125 aaKnown RBP13.22□□□□□ -0.29
VPS8-227ENST00000625842 SLC5A1P13866 664 aa13.21□□□□□ -0.29
VPS8-227ENST00000625842 AMER1Q5JTC6 1135 aaPredicted RBP13.21□□□□□ -0.29
VPS8-227ENST00000625842 ZNF772Q68DY9 489 aaPredicted RBP13.21□□□□□ -0.29
VPS8-227ENST00000625842 CDKL5O76039 1030 aa13.21□□□□□ -0.29
VPS8-227ENST00000625842 METTL24Q5JXM2 366 aa13.21□□□□□ -0.29
VPS8-227ENST00000625842 CCDC69A6NI79 296 aa13.21□□□□□ -0.29
VPS8-227ENST00000625842 RBM27Q9P2N5 1060 aaKnown RBP13.21□□□□□ -0.29
VPS8-227ENST00000625842 GSTO1P78417 241 aa13.21□□□□□ -0.3
VPS8-227ENST00000625842 SETDB2Q96T68 719 aa13.21□□□□□ -0.3
VPS8-227ENST00000625842 ZNF219Q9P2Y4 722 aaPredicted RBP13.21□□□□□ -0.3
VPS8-227ENST00000625842 TNNI2P48788 182 aa13.2□□□□□ -0.3
VPS8-227ENST00000625842 FLAD1Q8NFF5 587 aa13.2□□□□□ -0.3
VPS8-227ENST00000625842 SMC3Q9UQE7 1217 aa13.2□□□□□ -0.3
VPS8-227ENST00000625842 DNMBPQ6XZF7 1577 aa13.2□□□□□ -0.3
VPS8-227ENST00000625842 POTEJP0CG39 1038 aa13.2□□□□□ -0.3
VPS8-227ENST00000625842 UHRF1BP1Q6BDS2 1440 aa13.2□□□□□ -0.3
VPS8-227ENST00000625842 ZNF428Q96B54 188 aa13.2□□□□□ -0.3
VPS8-227ENST00000625842 SEC63Q9UGP8 760 aaKnown RBP13.2□□□□□ -0.3
VPS8-227ENST00000625842 ZGPATQ8N5A5 531 aaKnown RBP13.2□□□□□ -0.3
VPS8-227ENST00000625842 MKNK2Q9HBH9 465 aa13.2□□□□□ -0.3
VPS8-227ENST00000625842 CT47B1P0C2W7 299 aaPredicted RBP13.19□□□□□ -0.3
VPS8-227ENST00000625842 MATR3P43243 847 aaKnown RBP eCLIP13.19□□□□□ -0.3
VPS8-227ENST00000625842 IFIT5Q13325 482 aaKnown RBP13.19□□□□□ -0.3
VPS8-227ENST00000625842 RTCBQ9Y3I0 505 aaKnown RBP13.19□□□□□ -0.3
VPS8-227ENST00000625842 PDCP20941 246 aa13.19□□□□□ -0.3
VPS8-227ENST00000625842 TWISTNBQ3B726 338 aaPredicted RBP13.19□□□□□ -0.3
VPS8-227ENST00000625842 CENPQQ7L2Z9 268 aaPredicted RBP13.19□□□□□ -0.3
VPS8-227ENST00000625842 LUC7LQ9NQ29 371 aaKnown RBP13.19□□□□□ -0.3
VPS8-227ENST00000625842 POLA1P09884 1462 aaPredicted RBP13.19□□□□□ -0.3
VPS8-227ENST00000625842 ANKRD18BA2A2Z9 1011 aa13.19□□□□□ -0.3
VPS8-227ENST00000625842 STIM1Q13586 685 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 280.5 ms