RNA–Protein interactions for RNA: ENST00000623686.1

C1orf229-201, Transcript of chromosome 1 open reading frame 229, humanhuman

BASIC

Gene C1orf229, Length 2,258 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C1orf229-201ENST00000623686 ZKSCAN2Q63HK3 967 aa28.49■■■□□ 2.15
C1orf229-201ENST00000623686 THUMPD2Q9BTF0 503 aaKnown RBP28.48■■■□□ 2.15
C1orf229-201ENST00000623686 LAS1LQ9Y4W2 734 aaKnown RBP28.47■■■□□ 2.15
C1orf229-201ENST00000623686 RGPD8O14715 1765 aaPredicted RBP28.46■■■□□ 2.15
C1orf229-201ENST00000623686 EIF4A2Q14240 407 aaKnown RBP28.45■■■□□ 2.15
C1orf229-201ENST00000623686 ZBTB47Q9UFB7 747 aaPredicted RBP28.45■■■□□ 2.15
C1orf229-201ENST00000623686 NGDNQ8NEJ9 315 aaKnown RBP28.45■■■□□ 2.14
C1orf229-201ENST00000623686 SOX12O15370 315 aa28.44■■■□□ 2.14
C1orf229-201ENST00000623686 NALCNQ8IZF0 1738 aa28.44■■■□□ 2.14
C1orf229-201ENST00000623686 USP31Q70CQ4 1352 aa28.44■■■□□ 2.14
C1orf229-201ENST00000623686 RGS3P49796 1198 aa28.43■■■□□ 2.14
C1orf229-201ENST00000623686 FTSJ3Q8IY81 847 aaKnown RBP28.43■■■□□ 2.14
C1orf229-201ENST00000623686 DZIP1LQ8IYY4 767 aaKnown RBP28.43■■■□□ 2.14
C1orf229-201ENST00000623686 AAMPQ13685 434 aa28.43■■■□□ 2.14
C1orf229-201ENST00000623686 MVPQ14764 893 aaKnown RBP28.43■■■□□ 2.14
C1orf229-201ENST00000623686 NPM2Q86SE8 214 aaKnown RBP28.43■■■□□ 2.14
C1orf229-201ENST00000623686 DNAJC5Q9H3Z4 198 aa28.43■■■□□ 2.14
C1orf229-201ENST00000623686 TTC21AQ8NDW8 1320 aa28.42■■■□□ 2.14
C1orf229-201ENST00000623686 PCDHB15Q9Y5E8 787 aa28.42■■■□□ 2.14
C1orf229-201ENST00000623686 PIK3R4Q99570 1358 aa28.42■■■□□ 2.14
C1orf229-201ENST00000623686 TRIM27P14373 513 aa28.41■■■□□ 2.14
C1orf229-201ENST00000623686 AEBP1Q8IUX7 1158 aa28.41■■■□□ 2.14
C1orf229-201ENST00000623686 HSP90AB2PQ58FF8 381 aa28.41■■■□□ 2.14
C1orf229-201ENST00000623686 PEAK1Q9H792 1746 aa28.41■■■□□ 2.14
C1orf229-201ENST00000623686 NOB1Q9ULX3 412 aaKnown RBP28.4■■■□□ 2.14
C1orf229-201ENST00000623686 CALD1Q05682 793 aaKnown RBP28.4■■■□□ 2.14
C1orf229-201ENST00000623686 SULT6B1Q6IMI4 303 aa28.39■■■□□ 2.14
C1orf229-201ENST00000623686 ANKLE2Q86XL3 938 aa28.39■■■□□ 2.13
C1orf229-201ENST00000623686 ATF7IPQ6VMQ6 1270 aa28.38■■■□□ 2.13
C1orf229-201ENST00000623686 DLG5Q8TDM6 1919 aa28.37■■■□□ 2.13
C1orf229-201ENST00000623686 IFT57Q9NWB7 429 aa28.37■■■□□ 2.13
C1orf229-201ENST00000623686 FAM83GA6ND36 823 aa28.36■■■□□ 2.13
C1orf229-201ENST00000623686 ANKARQ7Z5J8 1434 aa28.36■■■□□ 2.13
C1orf229-201ENST00000623686 GNAI1P63096 354 aa28.36■■■□□ 2.13
C1orf229-201ENST00000623686 LMOD3Q0VAK6 560 aa28.36■■■□□ 2.13
C1orf229-201ENST00000623686 MAP3K19Q56UN5 1328 aa28.35■■■□□ 2.13
C1orf229-201ENST00000623686 ZNF853P0CG23 659 aa28.35■■■□□ 2.13
C1orf229-201ENST00000623686 ALDH1L2Q3SY69 923 aa28.35■■■□□ 2.13
C1orf229-201ENST00000623686 RTL5Q5HYW3 569 aaPredicted RBP28.34■■■□□ 2.13
C1orf229-201ENST00000623686 MBIPQ9NS73 344 aa28.34■■■□□ 2.13
C1orf229-201ENST00000623686 ZNF142P52746 1687 aaPredicted RBP28.33■■■□□ 2.13
C1orf229-201ENST00000623686 DCTN1Q14203 1278 aa28.33■■■□□ 2.13
C1orf229-201ENST00000623686 KIF16BQ96L93 1317 aa28.33■■■□□ 2.13
C1orf229-201ENST00000623686 ADAMTSL3P82987 1691 aa28.33■■■□□ 2.13
C1orf229-201ENST00000623686 FAM161AQ3B820 660 aa28.32■■■□□ 2.12
C1orf229-201ENST00000623686 PIK3C2AO00443 1686 aa28.32■■■□□ 2.12
C1orf229-201ENST00000623686 FMN2Q9NZ56 1722 aa28.32■■■□□ 2.12
C1orf229-201ENST00000623686 C8orf34Q49A92 452 aa28.32■■■□□ 2.12
C1orf229-201ENST00000623686 TSPYL6Q8N831 410 aa28.32■■■□□ 2.12
C1orf229-201ENST00000623686 ITPRIPQ8IWB1 547 aa28.31■■■□□ 2.12
C1orf229-201ENST00000623686 VAMP4O75379 141 aa28.31■■■□□ 2.12
C1orf229-201ENST00000623686 CFAP44Q96MT7 982 aa28.31■■■□□ 2.12
C1orf229-201ENST00000623686 RBM33Q96EV2 1170 aaKnown RBP28.3■■■□□ 2.12
C1orf229-201ENST00000623686 IPO8O15397 1037 aaKnown RBP28.3■■■□□ 2.12
C1orf229-201ENST00000623686 RGPD1P0DJD0 1748 aa28.3■■■□□ 2.12
C1orf229-201ENST00000623686 ZNF428Q96B54 188 aa28.3■■■□□ 2.12
C1orf229-201ENST00000623686 CHD2O14647 1828 aaKnown RBP28.29■■■□□ 2.12
C1orf229-201ENST00000623686 TMEM57Q8N5G2 664 aa28.29■■■□□ 2.12
C1orf229-201ENST00000623686 DDX19BQ9UMR2 479 aa28.29■■■□□ 2.12
C1orf229-201ENST00000623686 ELL2O00472 640 aaPredicted RBP28.28■■■□□ 2.12
C1orf229-201ENST00000623686 NLRP6P59044 892 aa28.28■■■□□ 2.12
C1orf229-201ENST00000623686 RWDD1Q9H446 243 aaPredicted RBP28.28■■■□□ 2.12
C1orf229-201ENST00000623686 SBNO1A3KN83 1393 aa28.28■■■□□ 2.12
C1orf229-201ENST00000623686 FLT4P35916 1363 aa28.27■■■□□ 2.12
C1orf229-201ENST00000623686 NUTM2GQ5VZR2 741 aa28.27■■■□□ 2.12
C1orf229-201ENST00000623686 BRPF1P55201 1214 aaPredicted RBP28.25■■■□□ 2.11
C1orf229-201ENST00000623686 AMPHP49418 695 aa28.25■■■□□ 2.11
C1orf229-201ENST00000623686 C8orf58Q8NAV2 365 aa28.24■■■□□ 2.11
C1orf229-201ENST00000623686 TWISTNBQ3B726 338 aaPredicted RBP28.23■■■□□ 2.11
C1orf229-201ENST00000623686 MRPL50Q8N5N7 158 aaKnown RBP28.23■■■□□ 2.11
C1orf229-201ENST00000623686 ARHGEF10O15013 1369 aa28.23■■■□□ 2.11
C1orf229-201ENST00000623686 MCM10Q7L590 875 aa28.21■■■□□ 2.11
C1orf229-201ENST00000623686 ABTB2Q8N961 1025 aa28.21■■■□□ 2.11
C1orf229-201ENST00000623686 PDZRN3Q9UPQ7 1066 aa28.21■■■□□ 2.11
C1orf229-201ENST00000623686 SETD1BQ9UPS6 1966 aaKnown RBP28.2■■■□□ 2.11
C1orf229-201ENST00000623686 PHF8Q9UPP1 1060 aa28.2■■■□□ 2.11
C1orf229-201ENST00000623686 ZBTB40Q9NUA8 1239 aa28.19■■■□□ 2.1
C1orf229-201ENST00000623686 MARF1Q9Y4F3 1742 aaKnown RBP28.19■■■□□ 2.1
C1orf229-201ENST00000623686 EYA1Q99502 592 aa28.18■■■□□ 2.1
C1orf229-201ENST00000623686 C14orf37Q86TY3 774 aa28.16■■■□□ 2.1
C1orf229-201ENST00000623686 NPHP4O75161 1426 aaPredicted RBP28.16■■■□□ 2.1
C1orf229-201ENST00000623686 HDAC1Q13547 482 aaPredicted RBP28.16■■■□□ 2.1
C1orf229-201ENST00000623686 ARHGAP45Q92619 1136 aa28.16■■■□□ 2.1
C1orf229-201ENST00000623686 IGSF1Q8N6C5 1336 aa28.16■■■□□ 2.1
C1orf229-201ENST00000623686 KDRP35968 1356 aa28.16■■■□□ 2.1
C1orf229-201ENST00000623686 FOXO3O43524 673 aa28.15■■■□□ 2.1
C1orf229-201ENST00000623686 ADGRL3Q9HAR2 1447 aa28.15■■■□□ 2.1
C1orf229-201ENST00000623686 HOXC9P31274 260 aa28.15■■■□□ 2.1
C1orf229-201ENST00000623686 MTHFSDQ2M296 383 aaKnown RBP28.15■■■□□ 2.1
C1orf229-201ENST00000623686 CHL1O00533 1208 aa28.14■■■□□ 2.1
C1orf229-201ENST00000623686 USP54Q70EL1 1684 aa28.13■■■□□ 2.09
C1orf229-201ENST00000623686 KRT24Q2M2I5 525 aa28.12■■■□□ 2.09
C1orf229-201ENST00000623686 USP35Q9P2H5 1018 aa28.12■■■□□ 2.09
C1orf229-201ENST00000623686 ESCO1Q5FWF5 840 aa28.12■■■□□ 2.09
C1orf229-201ENST00000623686 CRB1P82279 1406 aa28.1■■■□□ 2.09
C1orf229-201ENST00000623686 KIF24Q5T7B8 1368 aa28.1■■■□□ 2.09
C1orf229-201ENST00000623686 ABCC4O15439 1325 aa28.08■■■□□ 2.09
C1orf229-201ENST00000623686 ZBTB7BO15156 539 aaPredicted RBP28.08■■■□□ 2.09
C1orf229-201ENST00000623686 VIRMAQ69YN4 1812 aaKnown RBP28.08■■■□□ 2.09
C1orf229-201ENST00000623686 PSME1Q06323 249 aa28.07■■■□□ 2.08
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms