RNA–Protein interactions for RNA: ENST00000622493.4

CLTCL1-212, Transcript of clathrin heavy chain like 1, humanhuman

TSL 2 BASIC

Gene CLTCL1, Length 1,714 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-212ENST00000622493 ARHGEF25Q86VW2 580 aa18.83■□□□□ 0.6
CLTCL1-212ENST00000622493 CCDC146Q8IYE0 955 aa18.82■□□□□ 0.6
CLTCL1-212ENST00000622493 IP6K1Q92551 441 aa18.82■□□□□ 0.6
CLTCL1-212ENST00000622493 NCBP3Q53F19 620 aaKnown RBP18.81■□□□□ 0.6
CLTCL1-212ENST00000622493 LRRC59Q96AG4 307 aaKnown RBP18.8■□□□□ 0.6
CLTCL1-212ENST00000622493 CRYBG1Q9Y4K1 1723 aa18.8■□□□□ 0.6
CLTCL1-212ENST00000622493 APAF1O14727 1248 aa18.8■□□□□ 0.6
CLTCL1-212ENST00000622493 PLEKHF1Q96S99 279 aa18.8■□□□□ 0.6
CLTCL1-212ENST00000622493 GTF3C3Q9Y5Q9 886 aa18.8■□□□□ 0.6
CLTCL1-212ENST00000622493 PDE3BQ13370 1112 aa18.78■□□□□ 0.6
CLTCL1-212ENST00000622493 RSPH6AQ9H0K4 717 aa18.78■□□□□ 0.6
CLTCL1-212ENST00000622493 RGPD1P0DJD0 1748 aa18.78■□□□□ 0.6
CLTCL1-212ENST00000622493 NEFMP07197 916 aa18.77■□□□□ 0.6
CLTCL1-212ENST00000622493 MAPK8IP3Q9UPT6 1336 aa18.77■□□□□ 0.6
CLTCL1-212ENST00000622493 ABCC6O95255 1503 aa18.77■□□□□ 0.59
CLTCL1-212ENST00000622493 TCP11L2Q8N4U5 519 aa18.77■□□□□ 0.59
CLTCL1-212ENST00000622493 CERKQ8TCT0 537 aa18.77■□□□□ 0.59
CLTCL1-212ENST00000622493 CPDO75976 1380 aa18.77■□□□□ 0.59
CLTCL1-212ENST00000622493 UBAP1LF5GYI3 381 aa18.75■□□□□ 0.59
CLTCL1-212ENST00000622493 CABLES1Q8TDN4 633 aa18.75■□□□□ 0.59
CLTCL1-212ENST00000622493 SALL2Q9Y467 1007 aaPredicted RBP18.75■□□□□ 0.59
CLTCL1-212ENST00000622493 PLEKHG5O94827 1062 aa18.74■□□□□ 0.59
CLTCL1-212ENST00000622493 HMOX1P09601 288 aa18.74■□□□□ 0.59
CLTCL1-212ENST00000622493 PRKAR2BP31323 418 aa18.74■□□□□ 0.59
CLTCL1-212ENST00000622493 ZC3H6P61129 1189 aaKnown RBP18.74■□□□□ 0.59
CLTCL1-212ENST00000622493 IGSF1Q8N6C5 1336 aa18.74■□□□□ 0.59
CLTCL1-212ENST00000622493 ZNF521Q96K83 1311 aa18.74■□□□□ 0.59
CLTCL1-212ENST00000622493 SENP3-EIF4A1A0A087X0R7 540 aa18.74■□□□□ 0.59
CLTCL1-212ENST00000622493 CCDC27Q2M243 656 aa18.74■□□□□ 0.59
CLTCL1-212ENST00000622493 KDRP35968 1356 aa18.73■□□□□ 0.59
CLTCL1-212ENST00000622493 SULT6B1Q6IMI4 303 aa18.73■□□□□ 0.59
CLTCL1-212ENST00000622493 EYA1Q99502 592 aa18.73■□□□□ 0.59
CLTCL1-212ENST00000622493 ZBTB7CA1YPR0 619 aa18.72■□□□□ 0.59
CLTCL1-212ENST00000622493 PHLPP1O60346 1717 aa18.72■□□□□ 0.59
CLTCL1-212ENST00000622493 HAP1P54257 671 aaPredicted RBP18.71■□□□□ 0.59
CLTCL1-212ENST00000622493 PIP4K2BP78356 416 aa18.71■□□□□ 0.59
CLTCL1-212ENST00000622493 ABCA3Q99758 1704 aa18.71■□□□□ 0.59
CLTCL1-212ENST00000622493 PHF23Q9BUL5 403 aaPredicted RBP18.71■□□□□ 0.59
CLTCL1-212ENST00000622493 COL16A1Q07092 1604 aaPredicted RBP18.7■□□□□ 0.58
CLTCL1-212ENST00000622493 COL22A1Q8NFW1 1626 aaPredicted RBP18.7■□□□□ 0.58
CLTCL1-212ENST00000622493 TMPOP42166 694 aaKnown RBP18.7■□□□□ 0.58
CLTCL1-212ENST00000622493 COL18A1P39060 1754 aa18.7■□□□□ 0.58
CLTCL1-212ENST00000622493 KIAA0232Q92628 1395 aa18.7■□□□□ 0.58
CLTCL1-212ENST00000622493 WWC1Q8IX03 1113 aa18.69■□□□□ 0.58
CLTCL1-212ENST00000622493 LTV1Q96GA3 475 aaPredicted RBP18.69■□□□□ 0.58
CLTCL1-212ENST00000622493 AXIN2Q9Y2T1 843 aa18.69■□□□□ 0.58
CLTCL1-212ENST00000622493 GOLGA2Q08379 1002 aa18.69■□□□□ 0.58
CLTCL1-212ENST00000622493 NEUROD2Q15784 382 aa18.69■□□□□ 0.58
CLTCL1-212ENST00000622493 AEBP1Q8IUX7 1158 aa18.69■□□□□ 0.58
CLTCL1-212ENST00000622493 ANKRD24Q8TF21 1146 aa18.68■□□□□ 0.58
CLTCL1-212ENST00000622493 PHACTR3Q96KR7 559 aa18.68■□□□□ 0.58
CLTCL1-212ENST00000622493 ERBB3P21860 1342 aa18.68■□□□□ 0.58
CLTCL1-212ENST00000622493 RRP7AQ9Y3A4 280 aaKnown RBP18.67■□□□□ 0.58
CLTCL1-212ENST00000622493 RIPK4P57078 832 aa18.66■□□□□ 0.58
CLTCL1-212ENST00000622493 NFE2L2Q16236 605 aa18.66■□□□□ 0.58
CLTCL1-212ENST00000622493 WDR63Q8IWG1 891 aa18.66■□□□□ 0.58
CLTCL1-212ENST00000622493 PRDM11Q9NQV5 511 aa18.66■□□□□ 0.58
CLTCL1-212ENST00000622493 RGPD5Q99666 1765 aa18.66■□□□□ 0.58
CLTCL1-212ENST00000622493 NCAPD2Q15021 1401 aa18.66■□□□□ 0.58
CLTCL1-212ENST00000622493 NBPF6Q5VWK0 638 aa18.66■□□□□ 0.58
CLTCL1-212ENST00000622493 NBPF4Q96M43 638 aa18.66■□□□□ 0.58
CLTCL1-212ENST00000622493 CHRNA2Q15822 529 aa18.64■□□□□ 0.57
CLTCL1-212ENST00000622493 FAM208AQ9UK61 1670 aaKnown RBP18.64■□□□□ 0.57
CLTCL1-212ENST00000622493 CAMTA1Q9Y6Y1 1673 aa18.64■□□□□ 0.57
CLTCL1-212ENST00000622493 E9PSI1 815 aa18.63■□□□□ 0.57
CLTCL1-212ENST00000622493 LMOD3Q0VAK6 560 aa18.63■□□□□ 0.57
CLTCL1-212ENST00000622493 CDCA7LQ96GN5 454 aa18.63■□□□□ 0.57
CLTCL1-212ENST00000622493 LMO7Q8WWI1 1683 aa18.63■□□□□ 0.57
CLTCL1-212ENST00000622493 SLFN5Q08AF3 891 aa18.63■□□□□ 0.57
CLTCL1-212ENST00000622493 TRIM35Q9UPQ4 493 aa18.63■□□□□ 0.57
CLTCL1-212ENST00000622493 TRMT2AQ8IZ69 625 aaKnown RBP18.61■□□□□ 0.57
CLTCL1-212ENST00000622493 RGPD2P0DJD1 1756 aa18.61■□□□□ 0.57
CLTCL1-212ENST00000622493 GAS2L2Q8NHY3 880 aa18.6■□□□□ 0.57
CLTCL1-212ENST00000622493 IL16Q14005 1332 aa18.6■□□□□ 0.57
CLTCL1-212ENST00000622493 CSB-PGBD3P0DP91 1061 aa18.6■□□□□ 0.57
CLTCL1-212ENST00000622493 PLEKHG2Q9H7P9 1386 aa18.59■□□□□ 0.57
CLTCL1-212ENST00000622493 FAM83GA6ND36 823 aa18.59■□□□□ 0.57
CLTCL1-212ENST00000622493 CALD1Q05682 793 aaKnown RBP18.59■□□□□ 0.57
CLTCL1-212ENST00000622493 DUSP27Q5VZP5 1158 aa18.59■□□□□ 0.57
CLTCL1-212ENST00000622493 USHBP1Q8N6Y0 703 aa18.59■□□□□ 0.57
CLTCL1-212ENST00000622493 DLG5Q8TDM6 1919 aa18.58■□□□□ 0.57
CLTCL1-212ENST00000622493 WDR17Q8IZU2 1322 aa18.58■□□□□ 0.56
CLTCL1-212ENST00000622493 COL14A1Q05707 1796 aaKnown RBP18.58■□□□□ 0.56
CLTCL1-212ENST00000622493 MTHFSDQ2M296 383 aaKnown RBP18.57■□□□□ 0.56
CLTCL1-212ENST00000622493 NLRP2Q9NX02 1062 aa18.57■□□□□ 0.56
CLTCL1-212ENST00000622493 JCADQ9P266 1359 aa18.57■□□□□ 0.56
CLTCL1-212ENST00000622493 COL5A2P05997 1499 aaPredicted RBP18.57■□□□□ 0.56
CLTCL1-212ENST00000622493 HTATSF1O43719 755 aaKnown RBP18.56■□□□□ 0.56
CLTCL1-212ENST00000622493 AMOTQ4VCS5 1084 aa18.56■□□□□ 0.56
CLTCL1-212ENST00000622493 MYH16Q9H6N6 1097 aa18.56■□□□□ 0.56
CLTCL1-212ENST00000622493 SPINK5Q9NQ38 1064 aaPredicted RBP18.56■□□□□ 0.56
CLTCL1-212ENST00000622493 EVA1CP58658 441 aa18.54■□□□□ 0.56
CLTCL1-212ENST00000622493 PLEKHO1Q53GL0 409 aaPredicted RBP18.54■□□□□ 0.56
CLTCL1-212ENST00000622493 RAPGEF4Q8WZA2 1011 aa18.53■□□□□ 0.56
CLTCL1-212ENST00000622493 TOM1L2Q6ZVM7 507 aa18.52■□□□□ 0.56
CLTCL1-212ENST00000622493 RTF1Q92541 710 aaKnown RBP18.52■□□□□ 0.56
CLTCL1-212ENST00000622493 BTG4Q9NY30 223 aa18.52■□□□□ 0.56
CLTCL1-212ENST00000622493 GNAT3A8MTJ3 354 aa18.52■□□□□ 0.55
CLTCL1-212ENST00000622493 CARD10Q9BWT7 1032 aa18.52■□□□□ 0.55
CLTCL1-212ENST00000622493 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.52■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms