RNA–Protein interactions for RNA: ENST00000622017.4

TRO-225, Transcript of trophinin, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TRO, Length 1,403 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRO-225ENST00000622017 COL14A1Q05707 1796 aaKnown RBP18.36■□□□□ 0.53
TRO-225ENST00000622017 TRPC5Q9UL62 973 aaPredicted RBP18.35■□□□□ 0.53
TRO-225ENST00000622017 SLIT3O75094 1523 aa18.35■□□□□ 0.53
TRO-225ENST00000622017 CPDO75976 1380 aa18.34■□□□□ 0.53
TRO-225ENST00000622017 MTHFSP49914 203 aa18.33■□□□□ 0.53
TRO-225ENST00000622017 WDR43Q15061 677 aaKnown RBP eCLIP18.33■□□□□ 0.53
TRO-225ENST00000622017 STRN4Q9NRL3 753 aa18.33■□□□□ 0.53
TRO-225ENST00000622017 PLCH1Q4KWH8 1693 aa18.33■□□□□ 0.52
TRO-225ENST00000622017 OVOS2A0A0J9YW53 1432 aa18.32■□□□□ 0.52
TRO-225ENST00000622017 OVOS2Q6IE36 1432 aa18.32■□□□□ 0.52
TRO-225ENST00000622017 RXRBP28702 533 aa18.32■□□□□ 0.52
TRO-225ENST00000622017 POTEAQ6S8J7 498 aa18.32■□□□□ 0.52
TRO-225ENST00000622017 ARHGEF25Q86VW2 580 aa18.32■□□□□ 0.52
TRO-225ENST00000622017 ADAMTS8Q9UP79 889 aa18.32■□□□□ 0.52
TRO-225ENST00000622017 USP54Q70EL1 1684 aa18.32■□□□□ 0.52
TRO-225ENST00000622017 NWD2Q9ULI1 1742 aa18.32■□□□□ 0.52
TRO-225ENST00000622017 BLMP54132 1417 aaPredicted RBP18.32■□□□□ 0.52
TRO-225ENST00000622017 LTN1O94822 1766 aa18.31■□□□□ 0.52
TRO-225ENST00000622017 AMPHP49418 695 aa18.31■□□□□ 0.52
TRO-225ENST00000622017 CFAP53Q96M91 514 aa18.31■□□□□ 0.52
TRO-225ENST00000622017 SLIT2O94813 1529 aa18.31■□□□□ 0.52
TRO-225ENST00000622017 BCL9LQ86UU0 1499 aa18.3■□□□□ 0.52
TRO-225ENST00000622017 FBLN1P23142 703 aa18.3■□□□□ 0.52
TRO-225ENST00000622017 RBM6P78332 1123 aaKnown RBP18.29■□□□□ 0.52
TRO-225ENST00000622017 AATKQ6ZMQ8 1374 aa18.29■□□□□ 0.52
TRO-225ENST00000622017 RGPD5Q99666 1765 aa18.28■□□□□ 0.52
TRO-225ENST00000622017 MAP2P11137 1827 aaKnown RBP18.28■□□□□ 0.52
TRO-225ENST00000622017 PPM1GO15355 546 aaPredicted RBP18.28■□□□□ 0.52
TRO-225ENST00000622017 CSB-PGBD3P0DP91 1061 aa18.28■□□□□ 0.52
TRO-225ENST00000622017 RRS1Q15050 365 aaKnown RBP18.28■□□□□ 0.52
TRO-225ENST00000622017 GJD4Q96KN9 370 aaPredicted RBP18.28■□□□□ 0.52
TRO-225ENST00000622017 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.27■□□□□ 0.52
TRO-225ENST00000622017 VPS72Q15906 364 aa18.27■□□□□ 0.52
TRO-225ENST00000622017 NFAT5O94916 1531 aa18.27■□□□□ 0.51
TRO-225ENST00000622017 AXIN2Q9Y2T1 843 aa18.26■□□□□ 0.51
TRO-225ENST00000622017 MAP3K19Q56UN5 1328 aa18.25■□□□□ 0.51
TRO-225ENST00000622017 USP35Q9P2H5 1018 aa18.25■□□□□ 0.51
TRO-225ENST00000622017 CAMTA1Q9Y6Y1 1673 aa18.25■□□□□ 0.51
TRO-225ENST00000622017 TOM1L2Q6ZVM7 507 aa18.24■□□□□ 0.51
TRO-225ENST00000622017 IP6K1Q92551 441 aa18.24■□□□□ 0.51
TRO-225ENST00000622017 ATRNO75882 1429 aa18.24■□□□□ 0.51
TRO-225ENST00000622017 A0A0G2JS52 829 aa18.23■□□□□ 0.51
TRO-225ENST00000622017 MYT1Q01538 1121 aa18.23■□□□□ 0.51
TRO-225ENST00000622017 LARP1Q6PKG0 1096 aaKnown RBP18.23■□□□□ 0.51
TRO-225ENST00000622017 LTV1Q96GA3 475 aaPredicted RBP18.23■□□□□ 0.51
TRO-225ENST00000622017 POLKQ9UBT6 870 aa18.23■□□□□ 0.51
TRO-225ENST00000622017 COL18A1P39060 1754 aa18.23■□□□□ 0.51
TRO-225ENST00000622017 NRAPQ86VF7 1730 aa18.23■□□□□ 0.51
TRO-225ENST00000622017 LMO7Q8WWI1 1683 aa18.23■□□□□ 0.51
TRO-225ENST00000622017 COL3A1P02461 1466 aaPredicted RBP18.22■□□□□ 0.51
TRO-225ENST00000622017 HOXC9P31274 260 aa18.22■□□□□ 0.51
TRO-225ENST00000622017 SMG6Q86US8 1419 aaKnown RBP18.21■□□□□ 0.51
TRO-225ENST00000622017 ANKRD24Q8TF21 1146 aa18.21■□□□□ 0.51
TRO-225ENST00000622017 EMILIN1Q9Y6C2 1016 aa18.21■□□□□ 0.51
TRO-225ENST00000622017 COL5A2P05997 1499 aaPredicted RBP18.21■□□□□ 0.51
TRO-225ENST00000622017 SPATA31A5Q5VU36 1347 aa18.2■□□□□ 0.5
TRO-225ENST00000622017 SPATA31A7Q8IWB4 1347 aa18.2■□□□□ 0.5
TRO-225ENST00000622017 WDR17Q8IZU2 1322 aa18.2■□□□□ 0.5
TRO-225ENST00000622017 NLRP2Q9NX02 1062 aa18.2■□□□□ 0.5
TRO-225ENST00000622017 NUDCQ9Y266 331 aa18.2■□□□□ 0.5
TRO-225ENST00000622017 FAM98CQ17RN3 349 aaKnown RBP18.19■□□□□ 0.5
TRO-225ENST00000622017 ILDR2Q71H61 639 aa18.19■□□□□ 0.5
TRO-225ENST00000622017 ABCC6O95255 1503 aa18.19■□□□□ 0.5
TRO-225ENST00000622017 SPATA31A1Q5TZJ5 1347 aa18.18■□□□□ 0.5
TRO-225ENST00000622017 DIAPH1O60610 1272 aaKnown RBP18.18■□□□□ 0.5
TRO-225ENST00000622017 TCP11L2Q8N4U5 519 aa18.18■□□□□ 0.5
TRO-225ENST00000622017 GTF3C3Q9Y5Q9 886 aa18.18■□□□□ 0.5
TRO-225ENST00000622017 CRB1P82279 1406 aa18.18■□□□□ 0.5
TRO-225ENST00000622017 SENP3-EIF4A1A0A087X0R7 540 aa18.17■□□□□ 0.5
TRO-225ENST00000622017 PDE3BQ13370 1112 aa18.17■□□□□ 0.5
TRO-225ENST00000622017 HSP90AB2PQ58FF8 381 aa18.17■□□□□ 0.5
TRO-225ENST00000622017 NGEFQ8N5V2 710 aa18.17■□□□□ 0.5
TRO-225ENST00000622017 RTL1A6NKG5 1358 aa18.17■□□□□ 0.5
TRO-225ENST00000622017 FLT4P35916 1363 aa18.17■□□□□ 0.5
TRO-225ENST00000622017 KIF24Q5T7B8 1368 aa18.17■□□□□ 0.5
TRO-225ENST00000622017 CDK12Q9NYV4 1490 aaPredicted RBP18.17■□□□□ 0.5
TRO-225ENST00000622017 CCDC146Q8IYE0 955 aa18.16■□□□□ 0.5
TRO-225ENST00000622017 THRAP3Q9Y2W1 955 aaKnown RBP18.16■□□□□ 0.5
TRO-225ENST00000622017 ERBB3P21860 1342 aa18.16■□□□□ 0.5
TRO-225ENST00000622017 U2AF1L5P0DN76 240 aaPredicted RBP18.15■□□□□ 0.5
TRO-225ENST00000622017 U2AF1Q01081 240 aaKnown RBP eCLIP18.15■□□□□ 0.5
TRO-225ENST00000622017 RUNDC1Q96C34 613 aa18.15■□□□□ 0.5
TRO-225ENST00000622017 CARD10Q9BWT7 1032 aa18.15■□□□□ 0.5
TRO-225ENST00000622017 SEPT12Q8IYM1 358 aa18.15■□□□□ 0.5
TRO-225ENST00000622017 SALL2Q9Y467 1007 aaPredicted RBP18.15■□□□□ 0.5
TRO-225ENST00000622017 GLI3P10071 1580 aa18.14■□□□□ 0.5
TRO-225ENST00000622017 APAF1O14727 1248 aa18.14■□□□□ 0.49
TRO-225ENST00000622017 BARGINQ6ZT62 677 aa18.13■□□□□ 0.49
TRO-225ENST00000622017 PEAK1Q9H792 1746 aa18.12■□□□□ 0.49
TRO-225ENST00000622017 U2SURPO15042 1029 aaKnown RBP18.12■□□□□ 0.49
TRO-225ENST00000622017 ONECUT3O60422 494 aaPredicted RBP18.12■□□□□ 0.49
TRO-225ENST00000622017 FAM208AQ9UK61 1670 aaKnown RBP18.11■□□□□ 0.49
TRO-225ENST00000622017 IL13P35225 146 aa18.11■□□□□ 0.49
TRO-225ENST00000622017 NCBP3Q53F19 620 aaKnown RBP18.11■□□□□ 0.49
TRO-225ENST00000622017 PNNQ9H307 717 aaKnown RBP18.11■□□□□ 0.49
TRO-225ENST00000622017 ZNF521Q96K83 1311 aa18.11■□□□□ 0.49
TRO-225ENST00000622017 RGPD2P0DJD1 1756 aa18.1■□□□□ 0.49
TRO-225ENST00000622017 RGS12O14924 1447 aa18.1■□□□□ 0.49
TRO-225ENST00000622017 CDCA7Q9BWT1 371 aaPredicted RBP18.1■□□□□ 0.49
TRO-225ENST00000622017 FCHSD2O94868 740 aa18.08■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms